MK005394 K2838

Resource Type: 
Genetic Marker
Name: 
MK005394 K2838
Identifier: 
MK005394_K2838
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005394 K2838, is adjacent to primer, K2838_X.
The genetic_marker, MK005394 K2838, is adjacent to primer, K2838_Y.
The genetic_marker, MK005394 K2838, is adjacent to primer, K2838_Common.
The genetic_marker, MK005394 K2838, is located in gene, DCAR_016158.
The genetic_marker, MK005394 K2838, is located in gene, LOC108223623.
The marker_locus, K2838, is an instance of genetic_marker, MK005394 K2838.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr571.483K2838MapViewer
2016 Integ NG full mapCH54.886K2838MapViewer
Synonyms: 
  • MK005394
Sequence Coordinates: 
DCARv2_Chr5:733034..733085+
View location in JBrowse: 
DCARv2_Chr5:733034..733085+
Sequence: 
TTTCGCTAAATCAAAGTCAAGTTAGGATTATAGGTGCRAATGAAGCAATA
CAGCAACAAGGAAAAACCACR
Sequences: 
>MK005394_K2838 ID=MK005394_K2838; Name=MK005394 K2838; organism=Daucus carota; type=genetic_marker
TTTCGCTAAATCAAAGTCAAGTTAGGATTATAGGTGCRAATGAAGCAATA
CAGCAACAAGGAAAAACCACR
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TTTCGCTAAATCAAAGTCAAGTTAGGATTATAGGTGC
Three Prime Flanking Region: 
AATGAAGCAATACAGCAACAAGGAAAAACCACR
SNP: 
A/G