MK005874 K3318

Resource Type: 
Genetic Marker
Name: 
MK005874 K3318
Identifier: 
MK005874_K3318
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005874 K3318, is adjacent to primer, K3318_X.
The genetic_marker, MK005874 K3318, is adjacent to primer, K3318_Y.
The genetic_marker, MK005874 K3318, is adjacent to primer, K3318_Common.
The genetic_marker, MK005874 K3318, is located in gene, DCAR_018383.
The genetic_marker, MK005874 K3318, is located in gene, LOC108219692.
The marker_locus, K3318, is an instance of genetic_marker, MK005874 K3318.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr517.915K3318MapViewer
2016 Integ NG full mapCH549.696K3318MapViewer
Synonyms: 
  • MK005874
Sequence Coordinates: 
DCARv2_Chr5:29090611..29090662+
View location in JBrowse: 
DCARv2_Chr5:29090611..29090662+
Sequence: 
TTGCGAGTTGTCTACTCGTACAATATGTAAACCCCATWTAGCTTCTGCAT
CAACTCAATGGATTTCAAGCA
Sequences: 
>MK005874_K3318 ID=MK005874_K3318; Name=MK005874 K3318; organism=Daucus carota; type=genetic_marker
TTGCGAGTTGTCTACTCGTACAATATGTAAACCCCATWTAGCTTCTGCAT
CAACTCAATGGATTTCAAGCA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TTGCGAGTTGTCTACTCGTACAATATGTAAACCCCAT
Three Prime Flanking Region: 
TAGCTTCTGCATCAACTCAATGGATTTCAAGCA
SNP: 
A/T