DCAR_011706 | CarrotOmics

Resource Type:

Gene

Organism:

Daucus carota subspecies sativus

Name:

DCAR_011706

Identifier:

DCAR_011706.gene

Locus Tag:

DCAR_011706

Publication:

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Relationship:

There are 3 relationships.
Relationships
The mRNA, DCAR_011706, is a part of gene, DCAR_011706.
The genetic_marker, MK017688 3_39456541, is located in gene, DCAR_011706.
The genetic_marker, MK009530 3_39461579, is located in gene, DCAR_011706.

Analysis:


Name	Description
Carrot Genome Assembly DCARv2	An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below. These sequences can be viewed in JBrowse here. Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search
DCAR V1.0 Gene Prediction	For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here.

Transcripts:


Transcript Name	Identifier	Type	Location
DCAR_011706	DCAR_011706.mRNA	mRNA	DCARv2_Chr3:39456369..39462007

Sequence:

ATTCTAACACCCATCTTTGACTTGGAAGGTTTTTATACCTTTGATAATTT
AACAATCTTTCCTCTTCTTGTTCGGCTATCATTTCTCTTTCTTAGGGTTT
TTTTTCAGATCGTCAATCACCCCTCTTTTCTAATCTCCCTAAAAATTAGG
GCTTTTTTCATAACCCACCAATCTCAACCCTCAGAAATTCAATTCACCAT
GTGAAATCATCTCAAACACCCCCAATTTGTTGATTTTCGAACAATTGAAT
CATGAATTTACAACCCAATTTACCGAATGAAATGATGATGGGGCAAGTGC
CCCAGATGGCTAATTCATCGTTTAATGCGCAGGCACAGAATGTACAGAGT
GGTGGTGATCATCGAAACCACCCGGATACGGAGAAAGTTCGGAGATTTGT
GCAGAAGAAGATTTATGATTATTTGATTCTGAGAGGGCAACAGCAATCGA
GTGATCTTTCGGCCAAAAGAATGATTGATTTGACAAGGTTGTTGGAGAAG
GCTTTGTTTAATGCGGCTGCGACTTTGGATGAGTATATGAATCAGGATTC
TTTGGAGACTCGGTTGCTTTTTTATTTGAAGCAGTTGCGGAATACGCAGA
ATCAGAGGTTGTTGCAACAGCAGCAGATGAATTCTGGGTTGGCGAATCAG
AATCAGCAGGTGATGCAGCAACAGCAAGTTAATTCGGGCTTCGGGAATAT
GAATCAGAATCAGCAGTTTGTGCAGCATGGGAATTCCTCCGGGAATTTGA
GTACTATGATCCCGACTCCCGGTATGGATAATCAAAATTTGATTTTTAAT
GTGTGTATGTGTTTGTATGTTTGTGAATATTTGTTGTGAATTATGATGAT
AATGGATTTTTTTAATTAGTTCAATTTGGTCCCAATGACAGTATAAATAT
TTAATTTCAAGAATTTAAGAATGAGGCTTTCTGTTATAAATTAGGTAATA
ATGAAACAAAGGGTAGTTGGCGTATGAATTTGATTACTATGATCCCCACT
TCCGGTATGGATGACTCGAGCTTTAATTTTTGATGTGTGTATGTGTTGTA
TGTTTGTAAATATATGTAGTGCATTTTGATTATAATGGATTTTTAATTAG
TTCATATCGTAAAAATTTTTACTTTCAAGAATTTAAGAATGTGGTTTTTC
GTTATAAATTAGTTAATAATGTAACAAGGAGTAGTTCGAGTATGAATTTG
AGTTCTATGATCCCCACTCTCAGTATGGATAACTCGAGCTTCAGTTTTAA
ATGTATATGTGGGGGAAATTTGTTGTGAATTATGATGATATTGGATTTTT
GAGTAGTTCATACTGTTCTGAATGTTAGTAAAAATATTTGCTTTCAAGAA
TTCAACAATTTTTCATTACAAGCTAGAAATTTTACTGTGTTTATATGAGT
TTTGTGTGTTCATCTGTATTTGTTATAATGATTTAGGATTTTAGAGTAGT
TCATTTTTGCTTAGAAAGCTAGTCAATTGCTTATCTTTATGTAAGTGCTG
ATAAAGGTATCCTTGAACTAAGTATCAATTCAAGAAATTTAAAAAATGGG
ACTTTGCAGTTCAAACTTACATATAATACAAGAGGGAGTTGGGTTATGGA
TTTAGCAAAAAAACTAAAATGTAATGTATTTATTTTTTAAATTTAAGTAA
AATACTATTATTTACAGCTATTAGGTTCTGCAAAATGGATTTTTTTAGTT
GAAGTCGAAATTTGCTCAATTAATGGAGACGTGTAGATTAGAATCCAACT
GATTAGCAAGTCACAATCAATCTTTAGCTATATACAAGAGCCTATTCGTA
GTTCAATAGAATTAAATATCTTGTTAAATTGATAGTACATCTTTTGTTAT
CAATGATGTTTAATATTCTCTGACGTATATTTTTTTAATGGAAAATACAG
GTGGCTTTTTGCCACTTACTAGTAGCATGGGTAGTGCATCTTCTTTTTCT
AATGGTTATCAACAGCCAACTTCAGTCTTTCCCACAACTTCGGGTAGCAA
CAACATGGTTTCATCAGTGGGTGGTGGTGAGAGAATTCTTAGCCAGATGA
TGCCTACTCCGGGATTTGTTAATTCCAATAATACTGAGGCTTACAGGAGT
TTGGAGTCTAGTAATAGTGGTGTGGTCCCAACTGTTGAATCTATGATGGT
ATCACAGCCCCTGCAACAAAAGCAGCACATCAGTGGTCAAAACAGACGTA
TATTGCACAATGTTGGTAGTCATATTGGTGGTGGGATCAGAAATGGGACC
TTCAGTGGTGGTTTGGGAATGATGACTAACTATGCACAGCCTGTGAATGG
TACAGGTAGTTTTGAAAACCAACTGCCAATGTCACAAGTTCTGCATCATG
ATGGGTACGGGAGTGGTAGTGCTGATTTTTCTGGCTCTGGTACGGGTAAT
GTGTATGCTTCTTTGAATGCTCCTGGGCTTATGGCGAATAATCAGGGCAA
CCAATCAGAATTTCTCACTGCTCAACAGGATGTGCATGTAAAGCCTTTGA
TTGAACAGTCCGTAAAGATTAATTCTCAATCGACACAGTCATTAACTGAG
AATGTTGTGCAGTCTCATCAGCAACAACTTCTCCAGCAACCTAATCAGAT
TTCCCAACCAAGGCTGCAAAATCAGCCAAACCAGCTAGTCCAGCAAAATC
AGCTTATCCAGCAAAACCAGCACATCCAACAAAACCAGCACATCCAGCAA
AATCAAAGTTTACCAAATGGCGAATTACAAATGCGCAAAAACCAGCTGAG
GTGGTTATTGTTCTTGGGTCATGCCAAATCTTGTCGTGCTGCTGAATCTT
GTGCAGAAAAGCATTGCATAACTGTTCAGAAACTGTATAAGCATATTGAA
ACATGCACACTAACTCAATGCCCATATCCTCGTTGCCATGGTACAAGGTC
ATTACTTAATCATTACAAGATATGCAGGAGGACAGACTGCCCTGTTTGTG
TTCCGGCTAGAACTTTTGTGAACAAGTGTAAAGAATCTAGGACTAATGAT
CCCTCTGTCAATGGATCTTTTAGTACCTATGATAATAGGAATGCCTCAGG
CAGGTTGATTAATCAGTCTGTTATAGATACAGAAGATGTAAATCCTCCTA
CAAAACGCACAAAGATCGAGCAGCCTCTGCAGTCTCCAGTGCCTGACCCT
GAAACTTCTGCTCAGCCACTTCCTGCTTTTCGTGATTCTTGTACTCTGCC
GGATGTACAGTATTTGGAACATAGACCTGATGAAACTTGTAGACCAGTGA
AATCAAATGTTACAGGGGTGAAGTTGGAAACTTATGCACAAGATGTTCCT
CATGTTGAGCTGAAAAAAGATATGAATGAGAACTCTATGCGATTGTCTGA
TGGCGTTTCTTCTGTACCCAGTGGTGCTAGTGGCATCCCTAAGGACGAAA
GTTTTAATGCTGGTAAAGAAGTTTACCAGACTAAGCCTGAGAGCGTTACA
TTGCCTGCTGAAAACGTGAGTACAACCAAGTCTGGGAAGCCAGAAATTAA
GGGAGTATCATTGACAGAATTGTTTACTCCAGATCAAGTTCGGGAGCATA
TCACAGGTCTCAAGCAGTGGGTTGGCCAAAGTAAAGCGAAGGCAGAAAAA
AATCAAGCCATGGAACACTCAATGAGTGAGAACTCTTGCCAGTTATGTGC
AGTTGAGAAGCTAAATTTTGAACCTCCACCAATTTATTGCACACCTTGTG
GTGCTCGCATCAAACGAAATGCGATGTATTACACCATAGGAGCAGGTGAT
TCACGCCAATACTTTTGCATTCCTTGCTATAATGAAACTCGTGGAGAGAC
TATTTCTGTTGATGGAACTCCTTGTCTAAAGTCAAAACTTGAGAAGAAGA
GAAATGATCTAGAGACGGAAGAAGGGTGGGTTCAGTGCGACAAGTGTGAA
GCTTGGCAACATCAAATATGTGCATTATTTAACAGTCGGAGGAATGAAGG
TGGACAAGCTGAGTTCACTTGTCCAAACTGCTATATTGCTGAAGTTGAAA
GAGGAGAACGTACGCCCTTACCACAGAGTGCAGTACTTGGAGCAAAAGAT
CTGCCGAGAACAATTCTAAGTGATCACTTGGAGCAACGACTCTTTAAACA
ATTGAAGCAGGAGAGAATAGACAGGGCAAGAGTCCAGGGGAAAACTTATG
ATGAGGTTCCAGGAGCGGATTATCTTGTTATTAGGGTCGTGTCTTCGGTG
GATAAGAAGTTGGAAGTGAAGCCACGATTTCTTGATATTTTTCGTGAAGT
GAATTACCCCAACGAGTATGCATATAAGTCGAAGGTAGTGTTATTGTTTC
AGAAAATAGAAGGCGTAGAGGTATGCCTATTTGCTATGTACGTTCAGGAA
TTTGGAGCAGACTGTCAACAGCCAAATCATCGCCGTGTTTATCTGTCCTA
CCTGGATTCTGTGAAGTATTTCAGGCCAGAGATTAAAGCAGTAACGGGAG
AGGCACTCCGTACATTTGTATACCATGAAATTCTGATTGGCTACCTTGAA
TATTGCAAGAAACGTGGCTTTACGAGTTGCTACATATGGGCTTGTCCTCC
ACTAAAGGGTGAAGACTATATTTTATATTGCCATCCAGAAATTCAAAAGA
CCCCAAAATCTGATAAGCTCCGGGAGTGGTATTTATCAATGTTGAAAAAA
GCTTCAAAGGAGAAAGTTGTGGTTGAGTTGACTAATTTATATGACCATTT
CTTTGTATCTGGTGTTGGTGAATGTAAGGCTAAGGTGACTGCAGCTCGAC
TCCCATATTTTGATGGTGACTATTGGCCTGGTGCTGCTGAAGATATTATC
AATAAGCTTCAACAAGAAGAGGATGGTGGGAAGCTGCATAAGAAAGGGAC
AACCAAAAAAACATTCACTAAAAGAGCTTTAAGAGCATCTGGTCAAGTTG
ATCTGTCTGGAAATGCCTCAAAGGATCTCATGCTAATGCATAAACTTGGT
GAAACAATTAGTCCAATGAAGGAAGACTTTATCATGGTCCACTTGCAGCA
TTCATGCAGTCATTGTTGTATTCTGATGACTTCAGGAAACTGTTGGTTTT
GCAGCCAGTGCAAAAGTTTTAAGTTGTGCGATAAGTGTCATGAAGAAGAA
CTAAAACTTGAAGAAAGAGACAGGCATCCCATCAATCAGAGGGGTATGCA
TATGCTCTATCCTGTTGAAGTCACTGGCGTGCCTGCAGATACACAAGATA
CAGATGAGATTCTTGAAAGCGAGTTCTTTGATACGCGGCAGGCGTTTCTT
GGTCTTTGTCAAGGTAATCATTATCAGTACGATACCTTACGCCGCGCTAA
ACATTCTTCAATGATGGTCCTTTACCATCTTCACAATCCGACGGCTCCTG
CTTTTGTGACTACATGCTATGTATGTCATCTTGACATAGAAACTGGTCAA
GGTTGGCGCTGTGAGATATGCCCAGATTATGATGTATGCAATGCTTGTTA
TGAAAAGGATGGAGGAGTTGATCATCCTCACAAGTTGACTAATCATCCAT
CAATTGCGGATCGTGATGCACAGAACAAAGAAGCTAGGCAACAAAGAGTG
ATTCAGCTGAGGAAAATGCTCGATCTGCTGGTACATGCATCTCAATGTCG
TGTTCCGGAGTGCCAGTATCCTAATTGTCGCAAGGTGAAAAGGCTTTTCC
GCCATGGCATGTCCTGCAAAATTCGTTCGGGTGGAGGCTGCCTTCTATGT
AGAAGGATGTGGAATCTTCTTCAACTTCATGCTAGATCATGCAAAATATC
TGAATGTCATGTGCCTCGGTGCAGAGATTTAAGAGAACATTTCCGTAGGC
ATCAACAGCAGGCTGATAGTCGTCGACGTGCTGCTGTTACAGAGATGATG
AGGCAGCGGGCTGCTGAGGTTGCTGGTGGTAATTCCTGATATCAAGCTGT
GGAGATGTGTCAATCAACCAAGATAGTAGTTTTGCTGTTTCTTGTCTTCG
TTGCTGATACCTACAATCAGGACAGTAAACAACACAAGCAGCTTTCCGTT
GGTGCTTGGGGTGGCAAGGTTGCTGCGAAGTTGGTTGACTATGAAGCGAC
TTGATCAATTTTTTCATTCTTAGCAGGGGGAGTGAGTAATTTTTTGATTC
TTAAAGTTAAAATCTTTCCTTCCCTTCTAATAATTAGTAGTTTGTTTAAG
CTGTACACAAGTCAGAAATACATGTAGCAGCAGGAGAAAGGAGT

Sequence Length:

6194

Sequence Checksum:

a33b0ddcd32611908ac0c80953b1c225

View location in JBrowse:

DCARv2_Chr3:39456065..39462258-

Cds:

>DCAR_011706cds ATGAATTTACAACCCAATTTACCGAATGAAATGATGATGGGGCAAGTGCC CCAGATGGCTAATTCATCGTTTAATGCGCAGGCACAGAATGTACAGAGTG GTGGTGATCATCGAAACCACCCGGATACGGAGAAAGTTCGGAGATTTGTG CAGAAGAAGATTTATGATTATTTGATTCTGAGAGGGCAACAGCAATCGAG TGATCTTTCGGCCAAAAGAATGATTGATTTGACAAGGTTGTTGGAGAAGG CTTTGTTTAATGCGGCTGCGACTTTGGATGAGTATATGAATCAGGATTCT TTGGAGACTCGGTTGCTTTTTTATTTGAAGCAGTTGCGGAATACGCAGAA TCAGAGGTTGTTGCAACAGCAGCAGATGAATTCTGGGTTGGCGAATCAGA ATCAGCAGGTGATGCAGCAACAGCAAGTTAATTCGGGCTTCGGGAATATG AATCAGAATCAGCAGTTTGTGCAGCATGGGAATTCCTCCGGGAATTTGAG TACTATGATCCCGACTCCCGGTGGCTTTTTGCCACTTACTAGTAGCATGG GTAGTGCATCTTCTTTTTCTAATGGTTATCAACAGCCAACTTCAGTCTTT CCCACAACTTCGGGTAGCAACAACATGGTTTCATCAGTGGGTGGTGGTGA GAGAATTCTTAGCCAGATGATGCCTACTCCGGGATTTGTTAATTCCAATA ATACTGAGGCTTACAGGAGTTTGGAGTCTAGTAATAGTGGTGTGGTCCCA ACTGTTGAATCTATGATGGTATCACAGCCCCTGCAACAAAAGCAGCACAT CAGTGGTCAAAACAGACGTATATTGCACAATGTTGGTAGTCATATTGGTG GTGGGATCAGAAATGGGACCTTCAGTGGTGGTTTGGGAATGATGACTAAC TATGCACAGCCTGTGAATGGTACAGGTAGTTTTGAAAACCAACTGCCAAT GTCACAAGTTCTGCATCATGATGGGTACGGGAGTGGTAGTGCTGATTTTT CTGGCTCTGGTACGGGTAATGTGTATGCTTCTTTGAATGCTCCTGGGCTT ATGGCGAATAATCAGGGCAACCAATCAGAATTTCTCACTGCTCAACAGGA TGTGCATGTAAAGCCTTTGATTGAACAGTCCGTAAAGATTAATTCTCAAT CGACACAGTCATTAACTGAGAATGTTGTGCAGTCTCATCAGCAACAACTT CTCCAGCAACCTAATCAGATTTCCCAACCAAGGCTGCAAAATCAGCCAAA CCAGCTAGTCCAGCAAAATCAGCTTATCCAGCAAAACCAGCACATCCAAC AAAACCAGCACATCCAGCAAAATCAAAGTTTACCAAATGGCGAATTACAA ATGCGCAAAAACCAGCTGAGGTGGTTATTGTTCTTGGGTCATGCCAAATC TTGTCGTGCTGCTGAATCTTGTGCAGAAAAGCATTGCATAACTGTTCAGA AACTGTATAAGCATATTGAAACATGCACACTAACTCAATGCCCATATCCT CGTTGCCATGGTACAAGGTCATTACTTAATCATTACAAGATATGCAGGAG GACAGACTGCCCTGTTTGTGTTCCGGCTAGAACTTTTGTGAACAAGTGTA AAGAATCTAGGACTAATGATCCCTCTGTCAATGGATCTTTTAGTACCTAT GATAATAGGAATGCCTCAGGCAGGTTGATTAATCAGTCTGTTATAGATAC AGAAGATGTAAATCCTCCTACAAAACGCACAAAGATCGAGCAGCCTCTGC AGTCTCCAGTGCCTGACCCTGAAACTTCTGCTCAGCCACTTCCTGCTTTT CGTGATTCTTGTACTCTGCCGGATGTACAGTATTTGGAACATAGACCTGA TGAAACTTGTAGACCAGTGAAATCAAATGTTACAGGGGTGAAGTTGGAAA CTTATGCACAAGATGTTCCTCATGTTGAGCTGAAAAAAGATATGAATGAG AACTCTATGCGATTGTCTGATGGCGTTTCTTCTGTACCCAGTGGTGCTAG TGGCATCCCTAAGGACGAAAGTTTTAATGCTGGTAAAGAAGTTTACCAGA CTAAGCCTGAGAGCGTTACATTGCCTGCTGAAAACGTGAGTACAACCAAG TCTGGGAAGCCAGAAATTAAGGGAGTATCATTGACAGAATTGTTTACTCC AGATCAAGTTCGGGAGCATATCACAGGTCTCAAGCAGTGGGTTGGCCAAA GTAAAGCGAAGGCAGAAAAAAATCAAGCCATGGAACACTCAATGAGTGAG AACTCTTGCCAGTTATGTGCAGTTGAGAAGCTAAATTTTGAACCTCCACC AATTTATTGCACACCTTGTGGTGCTCGCATCAAACGAAATGCGATGTATT ACACCATAGGAGCAGGTGATTCACGCCAATACTTTTGCATTCCTTGCTAT AATGAAACTCGTGGAGAGACTATTTCTGTTGATGGAACTCCTTGTCTAAA GTCAAAACTTGAGAAGAAGAGAAATGATCTAGAGACGGAAGAAGGGTGGG TTCAGTGCGACAAGTGTGAAGCTTGGCAACATCAAATATGTGCATTATTT AACAGTCGGAGGAATGAAGGTGGACAAGCTGAGTTCACTTGTCCAAACTG CTATATTGCTGAAGTTGAAAGAGGAGAACGTACGCCCTTACCACAGAGTG CAGTACTTGGAGCAAAAGATCTGCCGAGAACAATTCTAAGTGATCACTTG GAGCAACGACTCTTTAAACAATTGAAGCAGGAGAGAATAGACAGGGCAAG AGTCCAGGGGAAAACTTATGATGAGGTTCCAGGAGCGGATTATCTTGTTA TTAGGGTCGTGTCTTCGGTGGATAAGAAGTTGGAAGTGAAGCCACGATTT CTTGATATTTTTCGTGAAGTGAATTACCCCAACGAGTATGCATATAAGTC GAAGGTAGTGTTATTGTTTCAGAAAATAGAAGGCGTAGAGGTATGCCTAT TTGCTATGTACGTTCAGGAATTTGGAGCAGACTGTCAACAGCCAAATCAT CGCCGTGTTTATCTGTCCTACCTGGATTCTGTGAAGTATTTCAGGCCAGA GATTAAAGCAGTAACGGGAGAGGCACTCCGTACATTTGTATACCATGAAA TTCTGATTGGCTACCTTGAATATTGCAAGAAACGTGGCTTTACGAGTTGC TACATATGGGCTTGTCCTCCACTAAAGGGTGAAGACTATATTTTATATTG CCATCCAGAAATTCAAAAGACCCCAAAATCTGATAAGCTCCGGGAGTGGT ATTTATCAATGTTGAAAAAAGCTTCAAAGGAGAAAGTTGTGGTTGAGTTG ACTAATTTATATGACCATTTCTTTGTATCTGGTGTTGGTGAATGTAAGGC TAAGGTGACTGCAGCTCGACTCCCATATTTTGATGGTGACTATTGGCCTG GTGCTGCTGAAGATATTATCAATAAGCTTCAACAAGAAGAGGATGGTGGG AAGCTGCATAAGAAAGGGACAACCAAAAAAACATTCACTAAAAGAGCTTT AAGAGCATCTGGTCAAGTTGATCTGTCTGGAAATGCCTCAAAGGATCTCA TGCTAATGCATAAACTTGGTGAAACAATTAGTCCAATGAAGGAAGACTTT ATCATGGTCCACTTGCAGCATTCATGCAGTCATTGTTGTATTCTGATGAC TTCAGGAAACTGTTGGTTTTGCAGCCAGTGCAAAAGTTTTAAGTTGTGCG ATAAGTGTCATGAAGAAGAACTAAAACTTGAAGAAAGAGACAGGCATCCC ATCAATCAGAGGGGTATGCATATGCTCTATCCTGTTGAAGTCACTGGCGT GCCTGCAGATACACAAGATACAGATGAGATTCTTGAAAGCGAGTTCTTTG ATACGCGGCAGGCGTTTCTTGGTCTTTGTCAAGGTAATCATTATCAGTAC GATACCTTACGCCGCGCTAAACATTCTTCAATGATGGTCCTTTACCATCT TCACAATCCGACGGCTCCTGCTTTTGTGACTACATGCTATGTATGTCATC TTGACATAGAAACTGGTCAAGGTTGGCGCTGTGAGATATGCCCAGATTAT GATGTATGCAATGCTTGTTATGAAAAGGATGGAGGAGTTGATCATCCTCA CAAGTTGACTAATCATCCATCAATTGCGGATCGTGATGCACAGAACAAAG AAGCTAGGCAACAAAGAGTGATTCAGCTGAGGAAAATGCTCGATCTGCTG GTACATGCATCTCAATGTCGTGTTCCGGAGTGCCAGTATCCTAATTGTCG CAAGGTGAAAAGGCTTTTCCGCCATGGCATGTCCTGCAAAATTCGTTCGG GTGGAGGCTGCCTTCTATGTAGAAGGATGTGGAATCTTCTTCAACTTCAT GCTAGATCATGCAAAATATCTGAATGTCATGTGCCTCGGTGCAGAGATTT AAGAGAACATTTCCGTAGGCATCAACAGCAGGCTGATAGTCGTCGACGTG CTGCTGTTACAGAGATGATGAGGCAGCGGGCTGCTGAGGTTGCTGGTGGT AATTCCTGA

Pep:

>DCAR_011706pep MNLQPNLPNEMMMGQVPQMANSSFNAQAQNVQSGGDHRNHPDTEKVRRFV QKKIYDYLILRGQQQSSDLSAKRMIDLTRLLEKALFNAAATLDEYMNQDS LETRLLFYLKQLRNTQNQRLLQQQQMNSGLANQNQQVMQQQQVNSGFGNM NQNQQFVQHGNSSGNLSTMIPTPGGFLPLTSSMGSASSFSNGYQQPTSVF PTTSGSNNMVSSVGGGERILSQMMPTPGFVNSNNTEAYRSLESSNSGVVP TVESMMVSQPLQQKQHISGQNRRILHNVGSHIGGGIRNGTFSGGLGMMTN YAQPVNGTGSFENQLPMSQVLHHDGYGSGSADFSGSGTGNVYASLNAPGL MANNQGNQSEFLTAQQDVHVKPLIEQSVKINSQSTQSLTENVVQSHQQQL LQQPNQISQPRLQNQPNQLVQQNQLIQQNQHIQQNQHIQQNQSLPNGELQ MRKNQLRWLLFLGHAKSCRAAESCAEKHCITVQKLYKHIETCTLTQCPYP RCHGTRSLLNHYKICRRTDCPVCVPARTFVNKCKESRTNDPSVNGSFSTY DNRNASGRLINQSVIDTEDVNPPTKRTKIEQPLQSPVPDPETSAQPLPAF RDSCTLPDVQYLEHRPDETCRPVKSNVTGVKLETYAQDVPHVELKKDMNE NSMRLSDGVSSVPSGASGIPKDESFNAGKEVYQTKPESVTLPAENVSTTK SGKPEIKGVSLTELFTPDQVREHITGLKQWVGQSKAKAEKNQAMEHSMSE NSCQLCAVEKLNFEPPPIYCTPCGARIKRNAMYYTIGAGDSRQYFCIPCY NETRGETISVDGTPCLKSKLEKKRNDLETEEGWVQCDKCEAWQHQICALF NSRRNEGGQAEFTCPNCYIAEVERGERTPLPQSAVLGAKDLPRTILSDHL EQRLFKQLKQERIDRARVQGKTYDEVPGADYLVIRVVSSVDKKLEVKPRF LDIFREVNYPNEYAYKSKVVLLFQKIEGVEVCLFAMYVQEFGADCQQPNH RRVYLSYLDSVKYFRPEIKAVTGEALRTFVYHEILIGYLEYCKKRGFTSC YIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLKKASKEKVVVEL TNLYDHFFVSGVGECKAKVTAARLPYFDGDYWPGAAEDIINKLQQEEDGG KLHKKGTTKKTFTKRALRASGQVDLSGNASKDLMLMHKLGETISPMKEDF IMVHLQHSCSHCCILMTSGNCWFCSQCKSFKLCDKCHEEELKLEERDRHP INQRGMHMLYPVEVTGVPADTQDTDEILESEFFDTRQAFLGLCQGNHYQY DTLRRAKHSSMMVLYHLHNPTAPAFVTTCYVCHLDIETGQGWRCEICPDY DVCNACYEKDGGVDHPHKLTNHPSIADRDAQNKEARQQRVIQLRKMLDLL VHASQCRVPECQYPNCRKVKRLFRHGMSCKIRSGGGCLLCRRMWNLLQLH ARSCKISECHVPRCRDLREHFRRHQQQADSRRRAAVTEMMRQRAAEVAGG NS*