LOC108219235 | CarrotOmics

Resource Type:

Gene

Organism:

Daucus carota subspecies sativus

Name:

LOC108219235

Identifier:

LOC108219235

Cross Reference:


NCBI Gene	108219235

Relationship:

There are 2 relationships.
Relationships
The mRNA, XM_017392562.1, is a part of gene, LOC108219235.
The genetic_marker, MK009553 4_5516472, is located in gene, LOC108219235.

Analysis:


Name	Description
Carrot Genome Assembly DCARv2	An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below. These sequences can be viewed in JBrowse here. Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100	The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here.

Transcripts:


Transcript Name	Identifier	Type	Location
XM_017392562.1	XM_017392562.1	mRNA	DCARv2_Chr4:5504876..5522233

Sequence:

TGCAAACAGTGCAGCATCCTGGTGAGACGGAGGGAGTATAACACTAACCA
CCCTCCTCTTCAAAACAAACATCTCCTTTTGCTTGAATAACAAACCCCTA
GTTTCAATGGAACCTTCTTTTCTAATCGCAATCCTCTCGCTTCTTCTCGG
CGCTATCATCATCTTCGTTGTGTTCGGCAACTACTTTCGCAACAGGAGAT
CGGACATCGATTCGCTCTCCAACAACAACAAGGAGATCGTCGATTCCAAG
CCTGCGTCCAAGCCGCAACACAAGAAACTCGGCTCTAAGCCTCACTCTCA
TGCTGCTGATAAGGTCTATTTCACTTTCATTTTATTGTTTGCGTTAGGGT
TTATGTCTGATTTCGTTGTTTAAGGGTCCTTTGCTTTGCCGAGGGGTCGG
GGTCGGGGTTGGAAGGAGGAATCGGGTTAAATACTGGGATGAGTTTGAGG
TATAATTCAGATAAAAAATATGTCCAATTTTAAAAAATTAAGTTATTAAT
TTAATATATTGAAAATGTTGTTGTTATTATTATTATTATAGTATATTTTT
TGCATCATTGATTTAATTGATTAAACCGACATAAATACATGAGACTAAAG
TTCAGTCATATACATGGTTTAATACCCCATACCCTGGGGGTTTGAGGTAA
GGGTTTAATTTTATTTTTTTTTACCAAACATCATGAATGAGTTTGGATTG
GACGAAATGCATACCTGACTAGAACACTCTGAACCAAACGACCCCTTAAA
GTGTTTTGGTTGATGTTGAATTGAATTGAAGTGCGTGTTTGAGTTGTTTG
TTTCTGGATTCTCAATGCTTGAGGTGGACATCAGTTATCGTGTTTTGTCT
ATGTGGAATTGAAATGTTTGTGGATTTGAAATGTATGCATATATGTGTAT
ATGTTAATGTTTATGTGTGCCATCGAAGTTGAATTATCGTTTTCTATTTA
TGCGTGGTTAGTGTAAATAAATATAGAATGTAATTCAACAGTTTGTTTTA
TATATATGAGTACTAATAATTGCTTGAGGTGAATATAGAAGTATTTCATT
TTGTTGATTTATGTTTTTTTGGTGTTTTTGTTTATATAGCTAAAATTGAA
TAAGAACAAGTAAGAACCACTAAGGTACAAGATATGTTTATATCTGTGAA
TGAAGTTTAACATACCGGTTGTAAGTTTTAGTTAATGCCATTCATCACTG
TTCTAAAATTAAGGTGCATTACACATGGGTTTAGTTCCACACTTCCGGTA
CAAATTAATAGAACGGGTACTACTAAAGTTCAACAAGATTGAATGTGTTG
AATCATAGTTGTTCTCACTAGTTTAACAAGGCCCTGTTTATATTCGTAAC
TGTTTTGAAAGCTTGGGTTAAATAGTGATTACTGTGTTACAAAATTCTCG
CTGAACTGCTCGTAAATCTATCTTTTCATTTGTATGCTAGGTTCTATCTT
TTTTGTATGCCAGGTTCATCTATCATTCTTTTAAGTGATTTGATTATGCG
GGATTGAATGAACTCTGTGTTTGATATGTTGTATATTTTATTTTTTTTAA
ATGATCATGTTTTTTGTGAAAAAATGTATCATTGAATACCTTCGCATTTA
TATTAATGTATTTCTTTCGATAAATGGCAGTTCTATTAATGGTTTTATGC
TTAGCTAGATTTGTAGTGACTTGTCAAATTGCTTGGATTGCGCAATTATG
TAAATATCTATCCTTGCATAATTGAATCAGTTTCATGTCATACTAATATG
TGTTTGAAAGTAGGAATTGAACAAGCGGCATCACCCTCTTGATCTGAATA
CCTTAAAAGGACATGGGGATTCTGTTAATGGCTTAAGTTTCTCCTCGGAC
GGCCGTAGTTTGGCAACTGGTAACTAGTATTTATCATCATTCTGACAATC
TGTATTTCAGTACCTTTTATGCTATCATTTTATCTAAAGTAATTAAACCT
TATTTTTTCTCATGATTGTTTGTTCAATTTGATCTGTAGCCGGACCTTAT
TGAAACCGGATCCGCATGATAGCAAGTGATTTAATGTAGTATTGTTCAAT
CCAAATATTACTAATTATATGTATAATTGTAAGTAGAATTCATTGTCATT
CTATTTTGCTAAAGCAGAGGTTACTTGTAAATATGACGTTGAAATTATAT
ATATATATATATATATGTATGTATGTATGTATATGTATATGTATATATAT
ATAGGGTTGCACTCCAGAAAGAACACTTTAAAAAAAGAACAACAAAGAAC
ACTATCATAACACTTCATTTTTTATAAAAAAATGATTTGTTAAGATTATA
AGTATATGGTTAAACACCAATTAAACTTAATATATGAAATCTAACACCCC
AAACTCATCGAAATTATAGAATCCAGAATAGAATCAAGAACAGAATCCAG
AATAGAATCATATAGATATATCTTTTGCACGATTATTTTACATAGAATCA
TGTTATTTTTAATTTATATTTATTGTTAAACATGGTGGATACTGTTTTTA
TTCATAATAAAACGTTAATCACCTTAAAATTTGAATTTAATTCAAGTTTT
TGATGAGATTCTACATTTGATTCTAAAGTGTTCTGTGTTGTTCTTTTTTT
AAGAGTGTTCTGTTTTGAGCAATGGCCTATATATATATACTAGCCTTTAA
CCCGTGCAAAGCACGGGCGCGTATATAATTCTTAAATTATTAATTATTAA
TTATAATTTAAATCGTAACGCCATTTTATTAGTATTTTAGTATTAATGAA
TTGAATTCTAATTAAATTATATACTCACCCACCCCCTATATGTCATCACC
CACCTAGGGCCCACCTTCACCCCCACTCAATCCACCCCGGGCCCGCTAGG
GCCTCGCCAAGTAGGGGTGAACATAAACCCGTTCAACCCGCTAACCCAAC
CCAAACCAACCCTTTTTTAGGCCGATTAACCCAACCCGTTCAAAACCGAA
AAATAAATGGGTTAATTTTTAAAAAATCCGATAAAGTTGGGTTGGGTCAG
GGTTTTACGAATTTCAACCCTGAACTAACCCAACCCAACCCGATTATATT
TATATATAATATTTACATACGTATCTTACATTTTTGAGTTTATGTCAATC
AATCTTTAACCTAAATTTGATTTATCTAGGGTGTGTTTATACATTTACAA
TAATAACATGAATAATTTTAAGTATCTCGATAACTATAAAATGTAAATGA
TGACTTTTGGAATTCGAACATGGTTAATGATCTGTTAATGAACTGATATA
CACCTTGAGTTTTTTTCTTCCTCTCGCGATGAATGACTAAATTTTTATTT
ATTATTGTTTTCGCAAGTTCAACCTAAACCAATCCGACCCAACCCGAATT
AATTGGGTTGGGTAAGGTTGGGTTACATAAATTTTTTTTTGTTAATGGGT
TAAGTTTTTATCAACCCGAACTAATTGGGTTGGGTCGTTTTTTTCTAAAA
ACCCGCCCAACCCGACCCATGTTCACCCCTATCGCCAAGGCTCCTCACAG
GCCCTGGACATGCTCCAGACAGTCTTAAAGAGCCAAACCTTGGCCCCACC
ATGGTCCCACTAGGCCCTGACCATCAATTTTTTTTATAAATTCTATTATA
GAATACATATAAAACGTGATTCTAATATAGAATACTATAACAAATATCTA
TTTTAAACAATTTAACACTTAAAATTTGATGAAAAAAGTATATTTTCGAA
ACTGATTCTATAGCAGAATAATCCTGGATGATTATTATTCTGTTATAGAA
TCATGTTGAGATATTGCATAATTTTAGATGATCTTTGGAATAAAAAAATT
GTATCTTCATTTTCGGTTTAATAATCAAAATTTTCAATTATATTGCATAA
AAAATATAAAAGAATATATATTATGTGCTCCCTCCGTCCCATTTTATGTG
ACCTCATTTCCTTTTTGGGACGTCCCAAAAAGAATGAACCTATAATACTT
ACTATTTTTGAACACTACTTTTCACTATTACACCCACTACCTCTATATTT
TATACTCTCTTTTTATTAAATAAACACTATTACACCCACTACTTTCTTCC
ACTATCTCAAATCTATTATTAAATATTGATGGGTCCCACCACTTTACCCA
CTTTTCAACTACATTTACTACCTTTTTCTTAATCTCCGTGAAAGTCAAAC
CACACCACATAAAATGGGACGGAGGTAGTATATATTTATAATAGTGTGCT
ACGTAACTCCATATAAGAGGTTATGCTATGAAGTGCTATATATATATATA
TGCCTTCTCCTTGAGGATCCCATAAAATGGTAACCTAGGAACTATCTAAG
ACTTAAAAAGACACGGCGCCAAAATAGGAAAACAGTTATTCTTTTCAAAC
CTAGTTAAGTTCTGTAAACAGGTACACGGTTCTGTGAACACGGAATAAAA
ATAAAAAGTGAAGAATAAAAAAAATACTTAATACAGAAATACAATGTCCT
GTATTTTTTACTCTAAATTTTATTGACATGGTTGTTCTTTGATTTATAAT
ATCTATTTATGTTTTAAATCAGTTATAAGTATTTTTAATACAGAACATAT
TTTTCTCTACTTTTTTAAAGATTATTTTGTAAATAAAGAATTTAAATTAT
ATAAAATACAGGACATAAGTTTTTCAAATATAAAAATAAAAATAAATGCG
TACCATTTTAGTGTTGATTTGATTTATTTTAGTAATATGTACTACAAGTT
ATGCAGACACATATCAAATAAATATTGTTCATATTACTAGTTAAAAAATA
AAAAAATTTAAAGAATAATGAAAATACAGGATACAACAAATCTAATATCC
TGTATTTTTATATTATACATTTCTTAACATGTTTGTTCTTTAATTTCTCA
CATATTTAGCATTTTATTTGTTTTCATATATGTATATATGAAATTGTATG
TTTCATTTGTTTTTTATTTATAGCTTGTCCTGTATTTTTGTTTGTTTAAA
TATTTTCTCACATGTTCTGTATTATATTTGTTATATATTTAAGTTTTTGT
TGTGTGTTCAAGGAGTAAAATAACATTTTTTACGTTTTATGTTTGTACTA
AAATATGTTGAAAGTTTTTAAAATACAGAACATATGAATTATGGATTATG
TGTGTAAACACGTGACTAGGTGTCTAGGTATTACAGTTATATATCAAGAG
TTTTGAAAATACAGAATATATGGACTACGTGTGTAAACACTGTGACTAGG
TGTCTAGGTATGGCAGTTATTCTTATATGGAGCGTGCTGAGTTGTATGGC
TGGGATCAAAAGTTACCAAGTTACCCAAACAAACGAGTTACTCATTGAAC
CATCCCCTATATGTATATATATGTATCTATATATATATATATATGATTTT
ATAAATATTCTTCGAAAAACCAAAACAAAGTATTTTAATTCACTCTCAGC
TTATGGATTTTTCTATTTGATGATTAAATTTCTTTTCTAAATATAATTAA
CCCTTCTACCACCTCTCGTCTAGACTAATTGCTTTTTTTTTGTTCGCTTA
TCTGAACCTAATATAGAATGATATTGTTCATTCTTTGGATCTCTCCTATT
TTGAAGTATCCCTACTCCCTAATTGCAATACATTAATTTGTTAATCCGTA
TCTAGAAGAAACTTATCCTTACATGATGGGATCAGGAATTCCATTGAACT
CCCAAATTTATTGGATTGATTAACCAAATAGATTTGTTGATCTGCCAAAA
TCTATGCCTACAGATATTTGTATCACATGTTTTAGCAGCTATTAAGTGTC
TCGATATCAGTGTTAAGATGGAGACAAATGATGTAGAGTATATGCTTTTA
GTATGAATAAGTGTGGCTGCAACTAGAAATTCGTTGTATCTGGAGAGAGG
ATAAGAATTATGGTAAATAAATTTGTTTTTATCTTTGACAAAAATAGTCG
TAAGTTATTTAGTTTTATGTATTTAAGTGTTACTGTATATAAGAGCTAGA
TAATTATGTGAGAATCCTCTCTTGCCGCATGAGGTTACTCTGTTGTTAGA
AATAGCCATCTGAATTATTATGTATCATTTAATGTTTAATATTTTCTGGA
TTTGAAAGTACTCGTAGAAAGTGTTGATTATTTATATTTCTATTGTGCAT
ATATTTCTTTGCAGACCAGATGTGTTAGAGACTGTTATGGTCTTAATGGT
GGATCCACCGAATATATTGTATCAGTTCATTTAACATTACTCAGAATACC
AATACCGGCCTGTTTGCTGACTTAATTAATTTTTGTAGTTGTTTAAAACC
TATCTTTTTTAAGAAGTTTAGCAATTTCTAGTAGCATCTAATATCCGCTT
AATGCTAATATCAAGATTTCTGTCTCTCACTATACTTGTGGTACGTTTGA
TATTTAACTATTTAAGTATACATTACGACAGAATAATATAATGATTTGAA
TAATCTATCCAAATTTTTTAAGGTTCATTGCAGTTATTGCGGTAACAGGT
GAACTGCAATCTTCCTGTATTGCTAAACGTTAAGTATATCAGAATGGAAG
CTGTAGAACTAGAATATCAGAAACTAATAGAACAATAAATTCTATATCTT
ATAGTTCTAATGATATGTTTATACTTGTACACTACTCAAGTTATTGGTAT
TGCTGAATCCCAAAATAATAATTACAAGTAATCAGGTCTCTAAAGTAAAC
TATAGAATATATCAAATTTGTACAAGAACTTGAAATGTACTGAGATACAT
AAGTTATCATTAGAATCAATATCTATCAAACTTAAAGCATGCCGAAATTC
CTATTACCTTAGAATCTGAATCGTTCAAAGATTGCTGAATTATAAATTGT
TAACTGGTTTGCCAATGTTTCATGTAAACCATATTTTTAGCAATATTCTT
GGAACTTGGAAAGCAGGGATACTCCACATGGGTGGAGTATCGCGTATGGG
ATACGGACCGGTGCGGGGGTGTTCCGCGGTGCGCCAGTTGGTGTATCCAC
GCGTTTCACTGATCCAATATGCGGGGGTGCGGCAATTGCAGTGCGGGAGG
GGCAGAAAATGTAATTTCACATGACTTTAAAATAAAGAAAATCAAAAAAG
AATTTATATTACATGAGTTTTCCCCAAAATGAAAGGGGCTGACCTAATTG
CAACTTGAAATAAGACAGACACATACATGCTCCTCTGACAACAATGACAG
CGACTTCTCTCTCTCTATCTCCGACGATGGCGGCAACGACTTTTATCTAC
TCTTATCTCTTCTCTCGTTGTGCTCATCTCTTATCTGAGTTCTCTCTACT
GCTTGTTTTGATCTGATTTTATGCCACCAGTAGATTATGTATTGTGTGTA
TATACGTGTTTACTGATGGAGTTGGTGTATGTAGTCAACTGCTTTGACTG
GTTTTTTTAATTATAATATTTTTTGTTTCTGTTCCTTTTTTGAGTTAATG
GTTAACATAGCTATATATATAGGGCATTGCTCAAAGAAGAACACCCTTAA
AAGAACAAAGAAGAACACTTTAGAATCGCATATAGAATCTCATTTAAAAC
TTGAACTAAATTCTAATTTAAGCTAATTAACCTTTTATTATGAATAATAA
TAGTATCTAACATGTTTAACAATAAATATGGATTAAAAATAACATGATTC
TATGTAATATTAGTCGTGCAAAATATATATACATGATTCTATTCAGGATT
TTGTTCTGGATTCTATTCAGGATTCTATAATATTTCCTATTAACAATTTG
GATGAGTTTGGATGTTAGATTTCATATATTATGTTTAATTGGTGTTTAAT
TATGAAATTATAATTTCAACGAATCATTTTTTATGAAAAATAAAGTTTTA
TGATAGTGTTCTTTGTTGTTATTTTTCTGAAGTGTTCTGTGTGGAGTGCA
ACCCATATATATATAATAATTTTCTAAAGTGTTATGTTATATAATTGGTG
GGTGATTTTTATATCCAATACCACATGCCAATTTCTTTGGCAGTGGCAGT
ATTATGAACTTATATGTATTTGATGTCTTTTATTTGCTAAAACCTTATGT
ACTTGACTATTTGATTTAGTTCGAATGCTACTTTTTGCTTTTCCTAAATA
TATATATATTTTAAATATTTTTATATTTGCCATATCCCCCTGCACAGACC
ATATGAGTACTTACTAAAATATTGTATACTAGAATTATGCTGCGTTGAAC
AATATATATACTCTTGGATGATTAATATCTATAATACTGAATCCCAAAGA
ATAATCTGAAGGAATCAAAATGTAACCAAACTGCAACATTATGTTTTTAA
ATGGCCTTGCTTTACAAAGCAGGACTCATTTGGGGCCAAAAGAAAGAATC
TTCCATCAAACTAAACAAGAAGTTGCTTTATAATTTGAATTTTCATGTCA
GCATTTGTTGGCCAGCTTTATTATTTAAAATATCAGGTTGGAAAATTGTT
GTGTATAGATATATGTGTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGG
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNGTTGTGATATCATCAGCGGTCATCTCGAATC
TGAAGTTATGCCAATTTTTTAACCGTAATGTCTTTCTCTCTCAGTCTCTA
TTTTCTAATCTATTATCTCAAACTTAATTTTTGCCAATCTTCGACTGCTG
GCCACAAAGTTGATTTTGTAAACAGAGAGATTTATAATGTTATAATTAGT
TTTTCGTGCTTTTGATACTTGCTTAATACAACTAGCCTTAAGAAAAGCTC
TATGACCTCTAATGAGGCCGTACTGACATTATGGTATATAATTACTTCTC
CATTTAATAAGTATTTTTCGCTTAACTCTTTCACTGTTAAAACACTCTTT
AGTTATATCTTGCATCCCTGACAATTTACACTTTCATTGTTGCTTATGAC
TCAAGCTTGTGGAGATGGAGTAATCAGGGTGTTTAAGTTGGATGATGTTT
CAAGTAAAAGTTTCAAGTAAGAATGTCAAACTCCTTTGAAACCTTAACAG
TTTTCCTCTTTCTGCTATTAATGCGCATGCAATATTGTTTATTGTGATAC
TTGTTTTTTTCCAGATTTCTGAGAATCAACTTACCTCCTGGAGGTCATCC
AACAGCAGTTGTATTTGGTGATGTTGTGACCTCCTATGTTGTGGCTTGTG
AGGCACTTGTTGGTTCTTCTTTGTACATGTATGGAGAAGAGAAGCCCAAA
CCGCCAGCTGATGCTAAGCAGCAGGCTAAGCTTCCTTTACCAGAAATGAA
ATGGCAGCAACATAAAGTTCATGATAAAAGAGCTATAATCACCTTATCAA
GAACTTCGGCAACCTATGGCAATGCAGATGGAAGCACAATTATTGCATCA
TGCTCCGAAGGTAATTGCTGCTTCTTCGCAGATAATTTGCTGATGTTAAT
CTATTTTCACATTCTTAGCGGATTGCTGATATAATCATTGTTGAAAGGTC
ATTGACATGCCTACAACATTTCATCCTGTTAATTGCATTTTGTTCTGTCA
TGTATATTGGAACATCATTTGTGTTAGGATTCTTCTGTTTAGATGTAATT
TTGCATGTTTTATTGGTCTTCGGTACATGCAGTCAGGTCATACAGAAGTG
TGACCTTCTCATGCTTATAACTTAGAATCATCTGTCTAAAATTTTTGGTG
CATACTGCATATCATAGTTCTTACTTGTTTTCCAGTATAGGATATTTTGT
CCTGATTTTCTTCATATCTTGCAGGAACTGATATCATACTTTGGCATGGA
AATACTGGAAAGATATTGGGGAATGTTGACACTAATCAACTCAAAAACAC
AATGGCTGCCATATCTCCAAATGGTCGTTTTATTGCTGCAGCAGCTTTCA
CTGCTGATGTGAAGGCGAGTTTGTCTAACTTTCACTAGTTTATCTGTTGA
ATTCGTCAACCATGGCTAAGGAACTTATAAATGATTCATTTTTAAGGGGC
TTTAAAAGTAATTGTGGTGGCTGATATGGGTACAATCTTCCAGAAGCATA
TTGCACATATCATTGTGATTTTGACAAACTGAATGCTGTCTATTCTTTAA
TTAGTGTAGTAAACACAATTAAGGAGTTAGCGTGTGTGCCTGTAATAAAC
CCAGGAATAATAAAGGCTACTTATACATGTCACCATGGCTGAAATGAAAC
AGCCTTTTTTCTCTAGTCTGCTGTAAATGAAAGCTGTTCATTTATTGCAT
AGACTTGAGAACTTGCATGTATACAGATGGTTTTTTAAAGTACATGGATC
ATTGTGAAAGTAATGCTGGAGATGGTATTTGCATGCATGATCAAATGAAC
ACTCCTAAATCATAAATATAATGCCTCTCACTGTTGTATCAAAGATGGAC
AAATCTTTTCTAAATCAACCGTGGTTAGGTCCAACATTTGACTACTTTTG
TCATTCCCATATAAAAGGTAGATATATAAAGATGGACAAGTCTTCATATT
AAGTTGAATGTACAGATTTGTGTAAATAAATAAATAATTAATAGCATTAT
AACATAAAATACTCCAAAATGATATTTATGCTAAGGATGCATTTTAAAGT
TATTTCGTCCAGTGTGTTTTGGATACATGTATGATAAATTCCAGGGTATT
CCTCTAAGAAATTGTTGCAATATGAAGAGGCTGGGGCATCCTTTTACTCC
TTGGGGGTGGTAGGTTTAGCATGAGCGTGTTTTTTAGAGGTCCTTTTGAT
TTTCTTTACCGTGATACATAATAGATATAGATTTCGAAATATGTTCTATT
GAACTTGCATTTCCTCTCCACTCCTCTTTGATAAAGATATAGTTTATGGT
TTTTGCTCCCTAAAGTGTGTACTAAAGTTGCCAAGTCAAATGTTTCTCAG
CCTGTTGGGCAATGCTTTATTAGTTAATATTTTTTTTTAAAAGCTATAGC
ATAAAACTTTTCAAGGTATTCTGAAACTTGACATAAGTTTATAAACTAGG
TTTCATAATAGTCTTTAAAACATGAATAGATAGTGTCTATCTATTTGGGG
GAACCCCGTGTTTAGTTATACACTTATAATCATTCCTAATATGCAAAAAA
CTCATACATGTGATGCGAAATCTTCTAAATAGGTAAAAGTTCAATGATAG
AAGATTTTAGGAGTGCAACTGCATGTGTTTTCTATTTATAAGCATTTTGG
CATGCCTTTGGTATAGTTTAGGATTCACGGCAACCCAAAGAACTGATAGA
GCCAACCCGTAGAGGCCTTTGGAGGTAATATAATTGTCATTGCTTATTGT
CCGCATACCTGGGTAAGTTATTCCTCTAAGGCTGTTGAAAACAACATATG
GCATCTAAATAAAATATCTACATGATTGTAGGTCTGTTGGGCGATGTAAT
GATGTTTAATGTTTATCTAACTCGGAGAAAGCAAAGAACTACAAATATTA
TATTGTTATGTGTCAGTGGCATATAGAACAAAGTCTTGCTTCTTTGCACA
ATAACTCTTGACTTTGTATTTGCCGTAAGGATTTAGCTTCTTACATAAAT
CTGTAGCTACGTCGGTACTTCAGATTTACCATCAAAATTGTTATCTGGAA
TTGCTTAGCATATTATTATTAGTTTATTTTTTTTTGGGAAATGGATTTTT
TTAGAGTGGTCATAATCTACACGTTCAGTTCACTAGCATGAAAAAACTAT
ATGCTGCATGATGTTACATGCTTAAGTAGTAAATTTCAATTGTCATGTCC
TTGTTGTAATTTGTTCTACTTGAGCATATTCAAAATTTGACTTCTAACCA
TCGTTATCAGAATTATAATAGGCCTTGGAGTTATAAATTTCACATGTTCG
TTCTACAGGTTTGGGAGATTGTATACTCGAAGGATGGTTCAGTTAAGGAG
GTCTCAAGAGTTATGCAGCTCAAAGGGCATAAGGTTGGTTTTTTGGTTAC
TTGCATCTCAAGATTCTATACTCGAAGGATGGTACAGCTTGTGTTGTTAT
AGTGAATTATACAAATTTTGAAATACGCACATTCAGCCACCGGTGTATTT
GTGTTGTTATAGTGAATCACAAAATTTGAAATACACATACAGCCAACGGT
GCTTGAAATTACACAAATCCCGACCACTTATTACCTATAGGAGACAAGTA
TCATTTAGGTTAAGCCTTGTGTTAGTTAATCGGCCAACTAGTCTGTTTCA
CTACTTCCTATATGTGATTTTATTGAACTTATAATGTCGTCTACTATCAT
TTTCTCACTAGAAAGGCATGCATAGATAGTCTGGCCATACTTATGTGTGC
TTTATCCTACTTTTGACTTCTTGTTTATTTATCTACAGAGTGCTGTCACT
TGGCTGTGTTTTAGTCCTAATTCGGAAGAAATTATAACGTCATCGAAGGA
TGGTACCATGAGGGTATGGAATATTAATGGTATGTCTAATTCCATGGACT
TTATCATGATGTTACATTTCACTTAATGGGACTTGACTCTTGAGCAACCG
TTTAAGTTATATATCATTAAAATCTATTGAACAAAGTGGTAGAACAATAA
TATTGTCAAAGGACAGTTCAAGAATAATGTGTAACAACTTTTGGTGCAGC
AAACATGTTGTCTAAAAATTTAACAAAAAGAAAAAAAGAATTGTGCCCGT
GACTGTTAAAAGCTTGAATGCAAACTGTTGGATATTCATTCTGCAGATGA
ATAGTTCAGTTTTGTTTTTCTATATTTTTTTATTTTTTAATTTTAAATTG
TATCTTATATTGTGTCATTTTTAGTATCTTATCTCTTTGCGTTTCTTGGT
CAACTCTTCTACATGAAAAATGAAATTTTTTTGGCTCAGCCACCTAATTG
AGCGAATGAATTCTTCGAACTGATTGATTGGCTTGATTTTGTTTATTTTT
TATTTTTTGAATCTATACCATGGTGCTAAGTAACCTAATTGTTATTGTTA
GTTCGATATCACCTTGATGAGGATCCAAAAACGTTGAAGGTGTTTCCTAT
TCCATTGCAAGATTCAACTGGCACTACTTTGAACTATGATCGTCTCAGTA
TTTCACCTGATGGAAGAATACTAGCAGTTACTCACGGGCCACTTTTGCAA
TGGTTATGTGCTGAAACAGGGAAGATTCTAGATACAGCCACCAAGGCACA
TGATGGTACAGATTCTAACATATTTGCATATCCTTTTTTTAGGATTTAAT
CTCTCAATCTTTAGGCTAGTCCTTTATCTCTATTCTCTACTAACTAGAAG
AAAATTGATTTCATTAATTAGCCTGTATTAATCAATCTCATGACCACATC
AGTAAGTTGAAACAATTAACAACTGACAATATAAGTTTTGGTGAGTGGCG
ACCCCACCAAAAAGAAATGGTTAAAAATCTATTCCTTGTGATTTAAATAA
TCTCAAACTTGTAGTTACTAGTTATTGAGAACTGGAAGGTAAGTTAAAAG
CCAAGTGAAAATTTTGATTATGTTAATATGATGTCTGAACATATCTGCTA
ATATATCTTGCTTCTTCGTTTATAATATATTGTAATTGTTAACATATGAA
TCTTTAAAGAAATAATATTCTCTCTCAAGTTATAGGCAATTGTTTAACAT
GGCGTCAAATAGTTTTCTGGAAACCGTCACAAATCTATATTATAATATAT
GGGTTCCCTAAATTAGTTACTGGTGATTTCATCATTGAAAATATCCTCTC
TGACCAACTGTTTGTGTGCACCCTTAAGTTTTTATTCGATTCTTCTTCTC
CACTGGCTTGTTTGCTATGTAATCCAGTTTTAAAACCTCTTGTATTCTAT
AAAATCTACTTATCATTTGTAAATTTGTTTTATGAGCATGATTCAGTGAA
CTCTTTATCTTGATGCCATATGCATGATGATTTAGTGAGCTCTTTATATT
CTTAATTTTATTAGTTTGATGATTCAGTAAACTCTTTATATCTTTATCTT
TTGAGCATTATGTCTGTATATTCACTAATCACTGTTCAGTGAATACTTCA
TCAAAAATCGAAATACAACAAATATGTAACTTTGCTAGTCTGCAAGTTTA
CTCGTCTGATTTGTGATATTTCTCCTGAATATTATGCTTAATCATCTTCC
TGCTCAAGTTTTTTCGCGACACTATATTTACAAGTGTGTGATTGTCAAGC
AGGTGACATTACAGACCTTGCATGGGCGCCAACTGGTATTCCAATGGGTA
AGTTGTATTCCCTTTCAGGAAAATTTACTCTAATTTTTATGCTTTGTAGA
TGATGAAAATGTTTTCTTTTCTACTTTTAACTTTTGAAATGAGGGGAGAA
AAAAATGGAAAGAGAATTTTGCTCCTGATTTTTTTGATAGAGAATTTTTA
GGAGTTTCTTGCCAAAAGTTTCTTCCCCATTCTTGGGAGGGTCTTCTCAG
AACTACTGGAATAATTTCAGATTTCTTTTTAATCTCAAATTAAAGAAGGA
AGAAACTTTGAGTGCATGCAAGAGAAAGTTAACTTCTTATCATTTTTTCC
TACACCTCTTACTCTTCTCTTCAAGTCTTCATCCTATAAATACTCTAGAG
CTTAGATTGATATTTTATGGTTCAAAGATGATTCACATACTAAGGAAAGT
GTTACATGCTAGGAATGATTACACATTAGAAAGATTTTGACATTTTTAAT
TTAATGATTAGGTGGGGTTACTTGACAAAAAATCTGGGATAATTCCCATA
AATAACTCTTAAATAGGAAACGAGTAATTTAAATGATATTCGGTTTGAAT
TACAAAATTTTATTTCTAATTTTAATAAAGCTGAACAAATTCCCTATGTA
AATCAATCATGAAAACATAATTTTCATCAGAATACTTTGTTTATTTGCCA
AGCTATGCTTAGAATCTTTTTAAAGTACTATGAGTTTTAAGCTTTTAAAA
CCTCCAAGATTCTTTTTGCGCCTTTTTTGTTGTTTTGCATCGATTCTGTA
GCACTTTAAAGGGAATGATGGGTCGTGATTTAAACGACATTCAGTTTTAA
AGTTTGTTGGGATGACAAATTTATAGTATATTAAAATTACAAGTTCTTCT
CCGAGAGTACTAACTTCTTGCAGCCTAATTAGTTTTGTGTGGAATAGCTA
ACCCTAGGCAATCTCGAACAAGAGGTTGAGGTTAATTTGAACTCTCAACT
ATGTTGACGTGCACAGCATTGCAGTCAGAAAATGGAGATAAATATCAAAG
TCATCAGTCGTTTGTTTCAAATATATCAAATTAGTCACTCGTTTTTGACT
CAATTTTATTACTAATTCGAGAAACTTGTATCAACCTAGTCATTAAAAAA
ATTAAATTTTGCATCAATTTAGTCACTGACAGATGATTTACTAGATACAA
AATTTTAAATTAGCAACGAAATTGAGTTGGTTTTGAAATTGATGACTAAT
TTTATATATTTGAACCAAATGAGTAATGACTTTGATATTTATACCTCAGA
AAATGTGGAATGAACCTAGGGAGAATTACCTTACCTATTGAAATCCCCTA
ATCCCAAAAGCGTGGTAAAATACACTTGTTACTTGTAGTTTATTTGCGCA
TAGCAGCAATTATAATAGAGGCCAGGCTTGCCCTTGAGAAAGCACAAACT
TCTGGCTTAACTGGTCGTAAACATGCTTTTACATCAGAGTAGACTTTATT
TATGAAAATAATGATAGAATGAAGAGAACTACAATGTTTGTTTTCGTGTG
AAATGATTCTTTTCGGATTGTCAGATAGCATTTGTGTATACGACTCTGTT
GAAGCATTTGTGTATTTTATAGTAAGACTCTGTTGAGCATGCATTGACCA
TATCAATAGAATGCTCATAATCATAATTAAAATAGATCTATTGTTGTAAC
TGGAACTCGTCCGCTAATCTAGTTGGCTCTTTTTTCTTGTCAGGAGACAA
GAAAATAACTGTTCTAGCCACTTCAGGCACAGACAAGAAAGTGAAGTTGT
GGGCAACACCATCTCAAAATTAATCTTAGTGGGTCTGATGTGATACCTAA
TCATGTGAACCACTGGTCTGCTTCCTGAACTTTGATTCGATCCCTTTCTA
ATCAAGCTGCTTTTGATTTAGCTGGAAGTTGGAAAGTAGTCTGATATCAA
GAATTAGGCGGCAGAATAGAAAACTAAGGTCCCTGTGACGGCTTATGTTT
GTGCAGAAATATTCACTGATATTGGCAGGAATCTTAGTTTCATTTAGTGG
TTTATATCACATGGCATGATGCAAGAACTGTAAAGCTTCCACAGGACTCA
GATTTTCAGAGGTGAGATTGCCATCTTTGCAAGATACATCAATGTATACA
AATATTGCATAATTTGAGACCTGGGGACCTACCTCTTGCTTATACCTGAG
CTTTGCCCTTTTTAATATTATTTTCTTTTAGCAAGATGGTGAATTCGTTT
AATCCTTTCAAGAATTTGTGTCAGAACCTGAACTTTTTAATGTTTCTGCT
GATGCTGTTCTAACTTCTAAGCAGCTTCCAATTTTCCATTATATATAATT
GTTTTAA

Sequence Length:

17357

Sequence Checksum:

1a1c7dbb4efcb6ad1278cb367944de53

View location in JBrowse:

DCARv2_Chr4:5504877..5522233-

Gene:

LOC108219235

Gene Biotype:

protein_coding

Gbkey:

Gene