Resource Type:
Gene
Organism:
Name:
LOC108222772
Identifier:
LOC108222772
Cross Reference:
| NCBI Gene |  |
|---|
Relationship:
| Relationships |
|---|
| The mRNA, XM_017396674.1, is a part of gene, LOC108222772. |
| The genetic_marker, MK004744 K2188, is located in gene, LOC108222772. |
| The mRNA, XM_017396673.1, is a part of gene, LOC108222772. |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. |
Transcripts:
| Transcript Name | Identifier | Type | Location |
|---|---|---|---|
| XM_017396674.1 | XM_017396674.1 | mRNA | DCARv2_Chr5:5810506..5828673 |
| XM_017396673.1 | XM_017396673.1 | mRNA | DCARv2_Chr5:5810506..5828673 |
Sequence:
AGTTAGAGCCGAATTCCGGGTTGCACATAAAAAGACGAACACAAATAATG
ATTGCAATACATGTGTGTATATATAATATTTACTATTCCCTGTATCCAAG
AAGTCAGCAGGATATACATACATAAATACATATACACACAGCGGTAACCC
TAACTACCGACTAACAGATTTCTCTTCCAATCTGTTGATGCCTGCTGCTC
GACGACTTTTAGTTACGGCGTCGTTTAATTCACACCTGGTAATTGAATCT
CTGGTCTCTTTTCGCTCTGTTAATCCACTGAATTACAGCTATCATTGCAA
TACTAACGATCAATTATTGTTGTTGTGTGTGTATTAGATTATTGACTTGC
AAATTTTGATTTTTAAGTTATATTTGGGGTTGACAATGTGCATTTTGTAC
GTTTTTAGGGCTAGTCGTTCACTAAGTTTGAGTTTTTTGTATGAATTTGT
GTACAAGTAGTGTTTAATTGGTAATTGGAGTTTTGATAAATCTGTTTTGT
TTACTTGAATTTGAGGTGTTCTATGCACCGTATGTTGGTAACTTGTAGGT
TTAGGATTTCGGGATGTAAATTGTGCACAGAATGCACGATTTAATTGATT
TTGTTTGGAGATACAGGCTTGTCAATTGTGATGCTTTGAGGATTTTGGTA
GCACGATAAAGGGTTGACATGGCTAGCGAGATGGTTATGGGTGAGGAAAA
TGTTAGTGTTTCAGGAGAGGGAGGTTTAGTTGCGGATCGTGAATGTGGTG
TTGAGAATTTATCAGTTTCAATGCAGTCATGTGAACCCTTTTGTACAGCT
CAAGTTGACTCCTTGGAGAGTTTCGTGGGTGCTTCTGATACAGTAGGGGC
TAATGCTATTTCCGGTGCCCTTGATAATATTAGTATAGCAGAGTCCTCAA
GAGAAAAGCAGGAGGAGAAAGATACTGTTGGTAGTCAGGATTTTGCTTCT
GAGAGTACAGTTCATGATGCTATTTGTTCGTCACTTCGTGCAAGAAATAG
CACTATTAATGGGCCACTGTTGAAAACTGATACTGCAAGGCCTTTGAGAA
AGTGCAAGATGATATCTAATAAAAAAGTTTTTCCGGGTATTGAGATATTA
GAGCTTGCAAGGAGGAGGAGGAGTTGTTTCTCCAATAGACCTCGTGTATC
TGATTGGGGATCACTAGAAACTATTGGACACGTTTTTAATGTGTTTGAAG
ATGCTAATTTGGATCAAATTGAGCAGAAAGAATCAAGAAAATGTAGTGGT
AGTAAGGGAGAGACTAAACGAAAGAATAATCGGAGACGCACAAATTCTCT
CGGGACTAAAAAAGAAATTCCTGCTTCAACTGGTGGCATCCGTTTGACAG
TCACATTTGGCGATATCATTCCCGGTGTTGTTGATGATCATAAAAGTTCT
TCTGGTATGCAGATTATATCTCCTAAATATAATAAAGATTTTGAGAAGAA
GTTTGAGGAAGGGACTTCTGGTACCCTTGATGGTCATGGCGGAATTGGTG
CCCAGACACAGGTTGGTCTATCGGAAGAAGCAGTAGGAAGCAGGTGCTTA
GATCCTGGGACTTCACCTGATTCAGAAGTTATAAACCTAATTGCGGAGAG
CCAAACTGATGAAAAAGTTGCCGAGGACGATATCTTAAACAAGAGATCTT
GTGTTAGTGGAGAGATCTCAAGTTTAAGTCTACCCAAAACATTTAGTAGG
AAAGGAAAGAAGAAAAATGAGCCCTCCCAGGATGATAAGGGAAGTGTTAA
TGATGAACCTTCGAGTCCGGAAATTATAGACGATACTGGAGTAGCTGACC
AACATAGGCACATGGAGAGGACAGATAACGGTTTCTCGACCAAAGATTCT
GTGTCAATTACAACCGGTAATATAACTTCTAAAACTTCTAGTGCCGGTGT
ATGCTTTACGGATACCCCCTTGCAACCATATGGAGTGTCCTCCTCTGGAG
TCCTGCCAAAAACATTTGAAGTTGAAAATTGTTTGGGAGGAGGCTTATGT
TCTCCAGCAGGGTTTCAACTTGAGACACTGGAGAAGTGTAATTCATTTAC
TGAACCAAGGGATCATGAAAATAGCGAAAACTCAAGATCTCCCGGGAGCA
GGTTGGAATTCTCTGAAGCAAAGTCTCTAATAGGAAATTCCTATGTCCAG
AAGGGAGACCAGTTTAACCTCAAAGCCAGGGAAACATCTGATCCTGTTCA
GGCTGTACATATGATCGACAATTATTCAAAAACAGGTACTTATAAAGTTA
TAGCTATGTCAATCAGATACTTTACTTCTTCAGTCTGTCTCCTTGTAAAT
TAAGCACAATTCTGTTAGCTTGTCACAATTCCTTCAATTTGGTGAAACCG
AAAGTGTTTATAGACGATGTTACTAAAATGTGACGTAAATGTCTAAAGGG
GTTCAAGTTCAAAATAGATTAATATTGACATGTCGTGTAACTTAATTTTT
TTTGCAGATAAGTGTTTTTCTCAGACAGCATTGAAATACTTATGAGATCA
TAACCAACTTTTTTGAATGTTATTCTAAGAAAAGTGTATGTTGTAGGAAG
TCACACATTTACTTATCACGGAGAACTCAAAACTGGATGCAGCATAACTC
CAGATACAACTAGCTTAAAAATGAATGGGGTAGGAGATGAACAATCACCA
CCACGGAATGCTTGGGTGAGTTGTGACAATTGCTATAAATGGAGGCGTAT
TCCAGCTCTGCTTGCAGATTCCATTGAAGACACAAAAAGTAGTTGGTATG
GCATCATGCATATATCTCTTAGATGCAAAAAAACTATATATATAAAAAAG
ACGTGTTATATAAATATGTCATTGAAGAAGAATTGGTGTATGTATCATGA
TTTGATAAATAGATTATCAGTTGAGAGATGAGAAGATATACTGGACCGAG
CTACCTGTCATGTCTGTGTCTTGTTAGTCAGATGTTTGAGGGGTATCAAT
ATTATTTATTCTTTGCATATAAGATATAAGTTAAGCTATGGAAGCGCTCG
TAGTTTTCTCTTAAAATTGCCATGAATTATTTCTGAATTCTAATTACATT
TAATTATGTGCTTTTCATGTTCCATTCTGTGGCTCGGGAGATTAACATCG
GCTTCTGCTTACATAAGTGTACTCCTACACAAAGTTACTAGTTTATAGAA
ATCTAGCTAATTCCTTTTGTAAGGTTCAACTTTCAGCATCCTCTTCATCT
CTTCTTTCATCTCTGTTAATTTCCAGTTAGGATTTCTTCTAATCCTATCA
CCATATAGCTCTGTAAGGTAGCTCACTATCACAAGCTTATTGGAAAAGTG
ATAGATGCACTTGTGATCATCAAGGAGGGTTTTTATCTTCCATCCATCAA
ACTCTTAACAAATGACAACCACATCCTAAAAGGACATCCATCAGCACACA
CCACATGTATCCTCTGTGCATGATCCTACTTGTTTTGTTCCTTTTCTAGT
CTCTCATTTTCCCTCCTAACCTCATTTTTCTTTTTTCTTATATCAGCAAA
TTCCTCATCACCCAAACTATCAACATAATCATCTTCTTCTGTGTCTTCTC
CACTGTCTTCTTTAATGTCGTCTCCATTTGCATGCCAACTCTCATCATCA
CTGTTATCATCTTTTCCTATAGAACAACTTTTCTTTTCCTTTGTCACATT
TCTTCCTAGGGGTCAATTTTTTGCTTCTCTTTTTATTCCCCTTCCCAAAT
CCTACTGCATTGCCCTCACCCATTTGTGCATTCTCTTCACCCATTTGTTC
TGCAATATCCCCACCCACTTGTTCTGCATTATCATCCCCACCCTCCTCAT
TGGAACTCCAAACATATCACCCCCGTCAACTAACACAGGTTCAACATACT
CAGCTTCTTTAGGTGGATCAGCCTTGCTCCATGAATGAAACACATGGAGC
TTGCAAACTCCTATCGTCTCAGCACTTCTAACTAACTCAATCACATCACT
ATCATGCACCAAGAATTTAAACCCTTGATCCGGAGTAACCCCATCAACTG
GAGAATACATTCTATCTTCGTCACTAACAACATCACTCACCATTTCCCTA
ATTTCTCCAACACTCAGCTTTTGCACTTCAGTTTTTTTAAACACCTTCGA
CTTTGGACCACTATACTCATACTTCAAGCAAGTCATGAAAGCACCCCCAT
AATATACAACTAATGATTATGTGGATGGCCTGACAGAGAAAATTAGGGTT
TACAATTATGATCACAAAAACAACAAAAAAAATTAAACATTTACAAACAC
TATCAATTAGGGTTTTAAAGAATTACAAAACAATCACACATTACAAATGT
AAGGGTTTATATATCACATATGAAGCACTGATATTAGAGTAACTTGTTTT
TCTTTGGGTTTAATCTCTCCACTTTACTGGGTTTGATTTATTAACGGGTC
GGGTACAAGCGGGTTGGACATTTAACATAATTCCGTCAAAGTCAAACATC
ATTTAAGGATCGTGATAATTTTCTATTTTACAGTGTTATGATTGGTAACG
TTTTTTGGAAATATTTTGAGTCTGAAAACTTTTTTGGGACGGCGATTTAA
CTGAAAATTGTAGTATATTACAGTGATGATTTGGCTTGTCAACCCGATAT
AAATCTATGTGGATTACAGGCTAAAAATTGTCCAAGGCCTTTTAGATTGC
AGAGACTGAACTCTTTTATTTTTTCTATTTTTGGATAGTTGTCAAGTATA
GAAAGAGTGGGAAGAAATAATCAAACTCCAGATCTCTTCTAGCACTAGAA
GTACCTTTTCCACCACTTGGGATTTCCTTAATCCTCAGTTACTTTTTGAC
TGTTAAAAAAAAATGTTAAAAGGGAGTAGTTTTTCATGTAACATGGCGTG
TATTTTTGTTATGGATAGGGACATTTATATTTCATCATATTAAAACAAAA
ATCTTGGTGTTGCTTGATTGCTTGGAACTTTGATGGTCATTATAAAGATA
GGTTCACATATTAGCTTCTTGTACTTTAGTCTTTAGCTTGAACCTTAACT
ATGCATATGTTATATAAAATAGGACCTGTAAGGACAACGTGGATGAAGAA
TTTTCTGATTGCTCAATTCCCCAAGAGAAATCAAATGCAGAAATCAATGC
AGAGTTGGACTTATCCGATGCATCTTGTGAAGATGAGGCTGGTGCTTCCC
TCCATAAGCCCAGTGGACCGGAGAAAAAGAAATTAACAGGTAGCTTTGTG
TTTTAGCTATATATCTTTCAAGCAGTAACCGAGTTTTGTCTTAGGATGAT
ACTTGGAAAATATTCTTTCTTAATTATAAGAACATTTCAATATTCTGCAG
CTTCTAAACAGTCGACTTGGAAGCTTATCAGATTGAACCATTTCCTGCAT
CGTGCCCGTAGAACACAAACAATAGATGAGGTAGATAGTTTTCTTTATTC
TAGTATTCATGAAGTTTTATCTTGTACACACACATTACATATATTGTTAA
TTTATATTGAAACTAAATTTCACAAGAACAACTCAAGTATGATAGCACTA
TTACGGGGTTTTGAATGTGTTATAAGATGTGTGGTGAATTGTGTCTAGAA
GCCAAAGGTATGTTGAGTTGCTACTATGTTCATAGTCAACATAGTTGTGA
GGTAGATGCCATTAAGAAATAAAGAATCCTGTTTTTGGCAGTAAACTCTT
ATATAGTGAAGAAAAGTACTCAGTATTAAAATATACTAACCTTTCTGACA
TTGAAACCCTACCTTTTTCACATATTTACTAATTTAGAGAAAAAACACAG
TATATACCAATTTAGACATTACAAGCAGTACAAGCAGTATATGCAAGATC
TCTTTTGGAAATTGGAAATACCCATAGTCCTTCAAAATACCACTTAATGC
AAATAGTATAATTTTGTTTAATCTCTAATACACGATAAGGAGTACCTTTG
AAGGGAAGTTGCAATATCCTTCCATTACTCAATTGATATACAGAGACTAT
TTCTATTTAAAGGTTATTTGGAAAATTTCTAAATGTCATAACTGAAATAA
TGTACAATAGTAGGTAGTTATTTCCACATATGAGAGCCAAACACACATCT
CTTTCATGAAATAACTAAAAACAGGGTCCGCCTGTTCTCTCACTTCAGAG
ATGACCACAGACTGCAGCACTGAAAAGTATATATGGTCTCATTATAACCC
TAAACTATCTATAATATGTGATTGCTATGTTGCTCCTTTTAATATATGAT
CATCATAAGCAAACAGAAAAATAGTGAGTATTGTTTTTTTTATGGCATGT
TACATGTGAATAAAGTGTATAATATGGTTGTATGACTTAGTCATTTGAAT
TATTAATTTATTTTCAAGAAAATACATTACGGAGAGTCTTGCAGTGGTAT
CTAACAAAATGAAATTATGACACAATGGAGTATGTGTTTATGTAGTAAAA
ATTGAGTATATCAGTATATGAATCAACATGTTTTTAAATTTGATAGATAC
TATAAATCAGGGATTATAAGAATTCTGTTTTATTCTTTAATTTAATTACT
TGGATTTAATTTTAGTCAATAATTTCTCACTTGTCTAGGATACTTTTGTT
TCAGATAATGGTTTGTCACTGCAAAGCACCTGTAGGAGGTCGAATGGGCT
GTGGAAATGGATGCCTGAATCGGATGCTTAACATTGAATGTGTAAAAGGA
ACGTGTCCATGTGGTGAACTTTGTTCAAACAACCAAGTAATAATGCTATT
GCTCATCTTTAATATCCTTGGACACAAAACTGTGGTCTAACTGTTGCTGC
AATTTACAGTTCCAGAAAAGGAAGTATGCAAAACTGAAGTGCTTTCGAAG
TGGAAAGAAGGGCTACGGGCTTCAGTTATTAGAAGACATTCATGAGGGGC
AGTTTCTTATTGAATATGTTGGAGAGGTATTTCACTTAGTTAGGTATTAA
AGTTTGAATTTTTACATTTAAATTTATTAAGTATAAAGGATGATTTCTTC
CTTTTTAAAGCTTGATAAATCAGATCTTTGTTGTTAGAAGATAGATTATA
TTAGAATGATGGTCTATATATATCATTCTCTTAAAGATGAAAATGGTTTA
GTAGATTATGCAGTCATTTTTGTGTTTGCTAAAATGTTGAAGTTTGCATT
AAATAACTTTCCTTTCCACTCATCCTACCGCGCAAAGATTCACAATTGTT
TAATCCTCATTTTAGTAATGGTCTAACTGTGATTTTTTTTTTTCTCAATT
TTTACTGGTTGTCAAATGGTTCTGTATCAAACGTGGGTGTACAGGTGCTT
GATATGCATGCTTATGAGGATCGGCAAAAGGAGTATGCTTTGGATGGGCA
TAAGCATTTTTACTTCATGACATTGAATGGCAGTGAGGTTTGGCAATTGG
ACATTTTCTTGTCGCTACTTAAAAATACTTGAAATTATTACCTACTTTAC
CGATACAAGTAGTAACTTTTGTCGGGTGATGTGATAGTCACCGATACAAG
TAGTAAATTTTGTTAGGTGATGTGATACTTTTTTTTTTTTTTGTCTTTTT
GTCACAGATGTGATGGTATGTTAATGTAATTGAATATCAGTTGTTTTTAT
AGAATAATTGTGGTTAGTGAAAATTATCGTGGTATGAATTTTGACATCAC
ACAGGGTCAGGTAGTAAAAGTATCTCCCAATTGTTGGTCATGATTTAGCA
CACATTGGCATGTGTGTTGTGTTGAGAGCTATTATGTTTTTTCCCTTATA
GCAGACTTAACTCATATCTCGTTTTCAAATTACAAGCATTAGTAAGAATG
GCTGTGTTCGCAGGTAATAGATGCATGCGCCAAAGGGAATTTGGGTCGTT
TTATTAACCATAGCTGTGAACCAAATTGCCGTACAGAGAAGGTGAGTACA
CTTATTTGAGCATGAATTTTTGTATCTGATTAAATACTTTTTGTAACACA
AGAGAAACAAATTCTGGAGTAAGATTGTTGCTGGTCTTGAGAAGATGGGA
TCTCACTTAAGCCAACATGGGATTTCAGATGGTTTGGCCGTGGCCTTAGT
AGATTGGTTGATTGCATTATATGTAGTTCAGTATATAATGAAGATAGTTT
TGAGAACATAATGCTTGTAGTTGTAGATGATTGACACTAACACTAGTTGT
TTCTCTATGTTTGTTTGAATAATATTGAAGAATAAATTTTCTGTTGTATT
TGCTGGTACAGTGGATGGTGAATGGGGAAGTTTGTGTTGGACTCTTTGCA
CTGAAAGATATTAAAAAGGTATGCTTCCTCGTTCCAACTTTCCACCCATT
AGCTATGGATCGAACTCACCGGCAAGCAATTAACTACTAAATAGGAAAAA
ACAAACAAGATGAACGCAAGTTTTCATTATCACTACTGAATAATTAGAAC
TGAAAAATAGAACAAGCACTCTGCATTCTTTGAGATGTGGCATCTCCCAC
ATATGACTACCCAATACAAATTATAGATAGATTTATTCTTTCCCCTCTCC
CAATATTTGGTCGCTACTCCCCTACTTGTCAGATGACCATTCTGCCCTCC
AAATTATCTTATGTTGGTTTGTTAAATACTTAAATTATAGCCTTTACTCT
TGGGCTTGAGTTTGCCTCTTTGACCATCTGTGGACCTCCTTGCATATGTG
AAAATTGCTCCATACTCATTTTGTTAATGCTTCCCTCTTATATCTTATCT
TTCTGTCTAATTTGTTCACAGCTATCCATCTCATCATGGCTTTACTCCAT
TCTGTCTAAACAAAAGAGTGGATCGCATTAAAGTGCATCATTGTTCTTTG
ATCCTAATTATGATCTGAGTTTTTACACATGATATATATCTGTATATTAT
CTGAATTATATGTTATATTTGTTATCTGTAATTAATAAACGTATTTTATC
AAAAAATATCTTACTATCCAATAAAAACTCTTAATTGAATTAATTGTATG
TGTAACTGCACCTACATTATAAAAATATTATTTTGCTACCTTAAGCTGAC
AAATCTCTTTTGTCAAAAAGCATTTAAAACCTTAAATCTATTCATGCAAG
GTTATTTAGAGTCGGTAATCATTATATAATTGTAACATTATGAAAGACTA
TAGATTATACTCATGTATATGGGAAAAGATTATGATATTACTTCTAGTGG
ACTAAATTCTTAACCAAAAACTTGTTTGGTTATATAAATTTTACAATGAA
TATTAACAAGGGAAGTGCTACACTGGGATGTATGACATCTACTCGAAAAC
CTATTAAAGATTTATGTCGTTACTATTTCAGTAGCAAGAGGAATTGGTTA
TTGGACAGATCAATATTTCACCTTCTATATATTAATATATGTTCATTGTA
ATTATCTAGTTTTGAGTTTATATATTCTTGCGAGAATGTAGTTATTCTTC
TTGATTAACATAAATTCACATTGTGAATAACCCGTTGCTGTGCGAAGACC
ATGGCAGGTTCTTTATCATTATGGCCTCTTGACAATTAGCTATCCACGTG
TCATGCGGTGCTATAATCTCTATGCATGAATGTAAAAATCATGTTTTTTG
CCTATCGTAGAATATGTGACTTGTGAAATACTAAATTTTTTATTGCAACT
TTCCTTGGCCATTAATATTTTTTTTACCCCTGCATTGGCCTGAGGTGACG
TCTTGAAGGCGTGCTCTCCTCTTCAGATGTTTCTTAGATGAGTTCAGTTA
GCATCAGAAATCTTGCCCGCAACTGCAATTTTGTTTTACTCATAATTTGG
CTTTCCTAGATGAAGTTTTCTTGGGCTTTTAATGTAGGAATGTAATGTTC
CACCCTGTAGTAGATCTTTCTCTAATGTAATGCTGATGGTGTTGTGTTCT
AGATATCGAATTGTACATAATTTGAACATTTTTTTATCATTTGAATTTCC
TTTTCAAGGATTTAGGAAAAAAAGAAACAAAAATCAGGTATGAACCTATT
CGTGGATGTCATTGTTTCAGGGTGAAGAGGTGACATTTGATTATAATTAC
GTACGGGTTTTTGGAGCTGCTGCCAAAAAATGTGTGTGTGGTTCATCTCT
GTGTCGGGGCTATATAGGTGGTGATCCTTCAAGTGGTGAGATTATTGTCC
AAGATGATTCAGATGAAGAAAATCTGGAATCAGTTATTGTCTGTGAAGAT
AGTGATGATTATTTGGACGCTACGGTTTCTGCAAGCAGTTTTGTTGAAGT
TACAGATACACGTATTGCTGAGAAAGATGTACTTGGCAACAATGCAAGGG
CTATTGAGCATTCGGAGGGTACAGAAAAGATGCATGCTTCGTATAGTTTA
TCAAAGCAAAGGAAAGAAACCAATGTTGACAACAGTGCTGCTGGATGTAT
GGTGATGTCCTCTAGCATTGAAGAATCTACACAAGAAACTTCTTCTGGTG
ACACGGATCTTAAAAGTGTTGCAGAAATGGATGGCATGATAAGATTACCG
GCATCCGTGCAAGCTATGGATACTTTCATGCAACTGGCTGATAGAAAAAA
AAAGATCTTAGCTGTAGCTCCACCAGAGCCCTGTCTAGCTGAAGAAGAAT
CAAGCAAATCTTTAAGCACCACACAGAGCTTTGAGTTATCAACAACAAAA
TTGAGCAGATCGTCAGTTGATAAATCTAGTAGTCGGAGGAAGCTAAAGGA
TGATCTCAGGGAAGACAGGAGTGTAATTACAGCTTCACATCCCAATGCAA
AAACTTCTCACACAACATCTTCTCTTAAAAAAGTAAAACCTCGAAAGAGT
GACTTGCTTTCAAAAAATTCTGCAGAGAGGGGAAATAAATTACATCCGTT
ACCTTACAGATCAAGAAAGACTGTAGACAGTTCCTCAAGCGATCCATTTG
AAGCAGGTGTGCATTTTGTTCTCTCCTACCGTGCAAGTACAGTAAGTATA
TGGTGCAATCATCGTATTTAATACATATCTTTATTTGTAAATACAGTTCA
GGTGAAGCTTAATGAGCTGTTAGATTCTGAAGGGGGAATAAGCAAAAGGA
AAGTAAGTATATCTTCCATTTGTATCTTCTAATATTGTATCTTCTCAGAA
TGGATTATGTGCATGTACTTTGTACTGGTTCTTCCTTTAGTTGGATGTTC
TATCTCTTTAAAACAAATATTGTTCAAATTTTGATGCTTAATTTTATGGT
GGGAATTGTTATTTTCAGAAAAGGGCAAATTAATTCTAACGTCCCTGAAC
TATTGGTGCTTTTTTTTTTCTAGGTCCCTGACGTATAAATAAAAATAGAT
AAGTAATTAAAATTTTGAATTTTTCCTATCAAAATCCTTCTGTTAATAAA
CGTCCGTTACGTTTTGCTGATGTGGCAAGTTTAAAAAAAATCAAAAATAC
GTTTATACCCTGTAAGCAGCCATCATGGACGACACTTGTACCAAATCTCC
GCACTCTCCTCCAATTTCCCAACTCCACTCCCATTTCTAGCCTTATTTCA
TACTCTTCTCACGGCCCGCTGGTAAACTCACCGGAAAGTTACCTGAAAAC
GAGTTGTGATGAAGAAAGGGTTGAGAACATGAACAGCCCGCCGGTGAATG
AGGGAACGACGCGAGATTGTCGGTTGAGAAGGAGAAAAATGGGCTATGGT
TGGGGTGGGGATTAGGATCCGAATTAGGGTTAGGGTTAAAATTGGGGCAA
GTCAATTTAGAAGGAGAGAGAGAGATGAGCTTGTGATGAGTCAGCTATTG
CTGTTTTAATTTTAATTTTTTGGGTTTGCCACGTAAGCGTTGACTAACAG
ATGTTTGTTGACTTTTAACGGTAGGATCCGAATCAGAAAAGTTTGAAAGT
TTAAGGATTGTATTATCATAAAAAATAGGTTAGGGATCTAGATAATAAAC
AGCCTATAGTTCAGGGACGTTAGAATTAATTATCCCTTCAGAAAACATAA
ATATTGTTGCTTATAGTGCTGTCATCTTATCACCCCTCCTTATGTCATGC
CTCCATATATTATCAATTAATATCTTCTTTTTTAGTTTTTTTGGGCATGT
TTTTGTTCCTTGGATCTCACACAAAACTTTCTATAAATTTATGTTGAGCT
GTTTAGTACCTTGTGACTAATTGATGCCTTTGTAATAGGATGCATCAAGG
GGGTACCTGAAGCTTCTTTTCTTAACTGCTGCTTCTGGAGGTAGTGGCAA
TGGAGAAGCAATCCAAAGGTACCCAGTGATTTGCTCATTTTTATCATCTC
TTCTCTGAACAATAATATCTGTAGTTGCTAATCTCATGTGTGCTGCAGCA
ACCGAGATCTGTCTATGATTCTTGATGCACTGTTGAAAACAAAGTCTCGA
ACTGTTTTGGCTGATGTAATCAACAAAAATGGTTTGTTCCATAGCTTATT
CAGAACACGTTACTTTCATATTCTTTTGTGATCTGTGAATGTGTAGTATC
TCCAGGGTTTGACCTGCTTCAATCTTCAGGTTTGCAGATGTTGCACAACA
TAATGAAGCGGTGCAGAAAAGAGTTTCATAAGATCCCAATTCTCAGAAAG
CTTCTTAAGGTGCATGTCATAGGAAATGTGTATCATGTAACTTTAATTTT
TTTAAAACAAATAAATGAATCATTTTGTCTTTGAAGATTGAATAATGATG
TCACTGATAGTCCTTAGCTGAATTGTGTTTTTGGTTCCGGCGGTAACTGT
GTTAAATTAGTGGTGCAAGCATTAGTTGTATGGCTTGTTAACTTCCATTC
TTCCAGTCAACAATCATTTTATTTAACAAATTTTGGGCAGCTGATTTGCA
CTTATTATGGGGACTATGATAGTATATCTAAGTTCCTAAATTGCTCCTAA
TTTTTTGTTAGTATGTTTTATTCTACAGTCCTGCATTTGTGGCAATGGAT
ATCATAAAAACTAATTGATTACCACTCTTACACAACAGAGTGAACAAACA
AATGCCAAAATGCGATTAACATTACTCCCTGTACAACTCTAAATTGAAAT
GTAATTTACAAACTCCCCAAACTTCAAGAAGTGTGACTAACCTTTCTAAT
AGTATTTTCTCCAAATGCCTAACCCTTTTCCCCTAATCTGTTAATATCCT
TTCTCCAACCTTCCACACTCATTGCACTTAGTAAATAACCCATTAACACT
CCTCTTTTTAATTATTCCCTGCAGTCTCCCTTTGCCGAGCCTTCTAGAGA
ATGTTACAGACCTGAGTTTTTACTAAATTCTTAGCAGAATTATTATCTTA
TCAATATAAGAACCTAATTTGGGGCTGTAGGTTATGTCATAGTTAAGTAA
GCGGTCGATCTAAAACCTTAAGGTGTCAGAGTCTTCAACACTCCCCCTAA
TCGTACGATTGAACAAACAGAATCCAGACAGAAACATATAATTGATTTAA
ACAGATGGGGGCAGGAGGACTCAAACGTACCCCTCCCTAAACTGAGCTCT
GATACCATGTTAAGTAACCCGTCCATCTAAAACCTTAAGGTGTCAGAGGA
ATGCCCCTACGGGATTTTATACTCTTCAACACTAGTTACTGTGTTGGTCA
GATTATCATGGGTTGAGTTTTCAGTTAGTGTTGCAGTGTTACAAGTATAT
GTAGCTGGAATTGGGTGGATGTTAGAAGGGCTTTAGCTGCTTATATAGTA
AATGTTCATTGTTATTGGATGTAGTAGGTGATTCATATCAATCTAACCGA
GACAGATCCCACCAGTTTTGAGTCGTATAGAATTGCTGAGGGTTCAGATG
GGGCCAATTTGGAAAGACCTGTTTTCAGATTAACTTACTGTAATTTTATA
CTTATTTGGTTAATATTTGACTAATATTTTGTTACCATGAATTTGTGGAA
AGAAGTGTCGGGGTCTAATGAGTGTATGACAGGCTACCCAATTTTTTTGA
TGCAGGTCCTGCAGTACCTGGCTCTGAGGGAGATACTTACCCCAGAACAT
ATCACTAGTGGTCCACATTGTGCTGGGGTGGAGAGGTCAGAATATATTAG
TAATTTTTGTTTCTATGGACATCTTTACATAGTTCCTTCAGTTTATTCTG
AAAATAATTTGCTTTGGAAATTGTTAGCTTCACCTATTATATGAATACAA
AGACACATGCACTTCATGTTTGCCTCAAATAAGTTTTTAAATTAGACATG
GATAACATGGAAGGAGGGAGTTGACTCCAGCTTGTGCACAAAATTGAATC
CTCTGTGTATACATCTGTTGGCTAATAAAACGACAACTGAGTTTCACTGA
AGTTGACTTGTTGCTCTAGTAGGTCTTATATAAACAATTGGCATGCATAT
ATATATGGATTTTCTTTAAACGATTAACTCATATATATAAAATATATGTA
ATATGGATGTATATAAATGTATAACATGATCTACTTACTGAGTGCCTTCT
TTAATTTTTGGAATCAAGGACTATGTAAACTTCGTAGTCTTAATAAAATC
AACTACTTTCTGTTTATCATGACGTTGTGCTCCAGATTCAAGGTTTTGGG
CACTTGTTCACTGCCCATCTTTCCCTCCTAGCAGAATCTAGCTCCTAACT
TCTTAATTGTTAAATTCGTCTTCTGCTCGTCTTCTAAGATGTATAAGTTG
TGAGTAAAGATTAGTTGTCTTCTTCTTACTTCCTTGTTTGTGGTCTGTAT
CATTCATGAATATGTACCACTTGTTTGGACTAATTTGCAAGAAGTGTATC
AGGTGTTTCTCCGTTTTCTCTGCTATAAGTGAAACTGATATAAATATAAT
TGGTTTTGCTGCAATGTCTAAAAACACAAGTGATATAAGTCATAATATTG
GTTACCTACCAGAAAACATACTGTTTGTGTGTACAATGTTGAGAAGCTGG
TTTTCTTATATTTGAACCCAATTGAGAACACTTCAACTCTTCTAGAAGTT
CTTGACTTAGTTGGACTGAGCTTGGACAAACAGCTTTTAAGAAATGCAGT
GTAAATGAGAAAGTGAGATAAATCGAGTGTCTAATTGTCAACCAATTCAA
GGGCTGGGCTCAAACGAGAACTAGTTCTCTGGGGACCTAGTATGTTCTAT
AAACATCTTCTCACTAATTTTTCTTGAAATGTTTAAAATATTTTCATATG
TGTGTTTCTAAATACATGAAACATGTGTTTATGACTAAAGTGACGATCTT
TACTGGACAAGTACAGACCTAGCATGTTCTGTACATAGAATATATATATG
TACATACATACATATCTATGTGTGTGTGTGTTTCTGCTCCATAAACCTTT
TGTCACCAATTTGTTTTTCTATATGCATATATTTTTTTTTTGTTATAATT
GTGTTTTTATCTACAAACAACATCCATTTTATATAAAATATAATATAATT
CTTATAAAACAAAGAGTATTCTCTGGAGTTCTCTGATCAAGGAGTTAACC
TTAGGACCCGACCCGTTAAATCATCATGAAAACAAGAAATTATTGCTAAA
CTCCACAATTAGGTTATACTTTAGTACCATTTGTTAATGTAATGTCTTAC
TTCTGGTTTGTATAGTAATCTTTCTTATACTTTGTGTTTTGGTATTTCCT
ATCATCTTGTCTTTCCCCTAATGCTTTTTACACAACTTCTAAAATATATC
TGAAATGAAATATATCTTAATGCAGTTTTAGGGAGTCAATATTGTCATTG
ACGGAGCATGATGACAAACAGGTAATATTTACCTTCTCGAATTTAAATGT
ATATAGCTATGTAGCAAAAAAAAAAATTGTCTATAGGCCATTTTTTTTCC
TCTTTCACGATGTGTTTCTCTTCTGTTGTTTGTTAGAAAGTTTAATGTGG
GTTTATATTTTCATCCCTTTTTGCTCCCAATTTTCTTATAAATACTGATC
AGCTTCGGACCCACTCTACTTAGTTTAATTAATTTGAATTCTTTGCACTA
TTAAATGTACAATTTCTGTGTTTTGTAAAGAAGCAATCGTTCTTGATACT
AGAAATTGCTGCTGAAAATAAAAGTTGCTTAGGAATATTGTGCTTTAGGT
CAACTCCTAGTCTCCCACTAAAATTAAGTAAAATTCTTTTTCGGCTTTGT
TTTATACCCTCTGTGAGATTTACAACCTCCATAGAGCATGAGTCTACTGG
AAGTTCGAAAGCCACGAAAGAAGTTACTGTGTACAAACTAAATATAATTG
CAAGAATGGTCAGATAAACCAATTGAGGACTCTGATCTGTAGATGTAATC
ACCATAGGCGAGGAAGGTGATGTTTACATTGAACTGAGTGAAAGCAGATG
GGGTAGATTGGACTTTACAGTTTCTGTTGTTTAAGCTCTATAAGAATGTA
CTTATATAGTCTACTCGGTAAAATTCAAGGTGACTACATTTTGAATATGA
CATGTCCTGATTCTTTATTGTGGCGTTAATTTGTCTGGCTGATCCTACTC
GAAGGCCCTCCGACTAGAATGAAAATATTAATATCATGTTTATGAACTGT
TTTCTCATAGAGTTCACATTGAAATACTGAATATTCACATGCCATAAGAC
TGAAATTTATCTTAAATTCTGGAAAGTACACAAACCTTATTTTGTGATCA
ACATTTGTCCCCTTGGTTGCCTGCTTTTGTTGCATGACTTGGGATTTAAA
TAGGATATTGCTGAATCATTAGTTGGTTTAGTCTGGTGTAAATCTAATTA
TTTTCTTTTTCTTATAAAGTTATTTTCTTTAGAAACTGTAAAGAAGATCA
TTTGTGATAAATTTGAATATATTGGTCCTTGTTTTGTCTTTCTTGCACAA
CAGGTCCATCAAATTACACGCAATTTTCGAGATAGGTGGATCCCGCGTCC
AATTAGGAAGAACAGTTACATGGACAGAGACAGTGGTAAGCTGGATTTTA
ATAGGGTGGCCTCAAACTCCAGCAGGTTATCACCACTACAAAGTCAGTCA
TCTGATTCAGGCGCAAGACATCCTGAATCAGTAGAATGCATCAAGCAACC
AAGAAGCTCAAATATTAATCGTGAAAATACAGACGGCTGCTCTGCTTTAT
GTAGTAGTGAATTTGTTGCTGATGGAGCAAGAGTCCAAAAACGTAGAAGT
CGATGGAATGAGGCAGAAGACTCAAACCGTGGTAAATATGCTCCCCTGCA
TAAAGAACCAAGGATTCATTCTGAATCTGTACAAGTTTCACATATTAGCC
TGCTTTATGGGAATAGTGGAGTGCCATCTGACCAGGCTGCTATTATAAAT
GAGGAAAAGCATAACAATCTATATGTAAATCGTTCCCCCAATAGGATGAC
TATTAAATATCTAGATAACAACGAGCAAAGCATTGATGAGGATGTACCTC
CTGGTTTTTCTCCTCCTCATAAAGCTTCTTTTGTGCCATCTAGTGCTTCT
TCAACTGCCTCAACTTTTTGCCAAGAGAAGTGCTTGTTCCCAGAGTACCC
TTTTGAAGTGACGGTGGGCCATCCACAGGAGAGATTTGTTTCAAGGTCCC
CTGTTTCATTTGGGATTCCAATGCATGCGGTGGAGCATTTTGGTAGACAA
GGTGAAATAGCTGAGAATTGGTTTGTAGCAGCTGGGATTCCTTTCCACCC
TTATCCACCACTACCTCCGTATCCCCGTGATAGGCGAGGCCCTGCACCTG
CTTTAAGTTCTATGATATTGAACTCTGTTCCAGTAATTGGGGAGGGTTTT
CAAAATAATGCCACTTATCAATCGGATCAGATTACTTTCAGCACATCTGC
TTCTTGCATGCCGGATTTGGAACTTTCAGCTCCCGTGAAGCAGCACCATT
TTCAAGGAACAGGGGGTGCCTCTAATAGGTTGGAAAGGAGATACTTCAGG
CAGCAAAAGTGGATCAATACAAAATCAAGGCCTCCCTGGGTCCGGGGTGA
AGCTGGTAGGGGAAACTTTGGGAACATTTAAAGATATGGATTCAGTTTTG
TAGGCATATGAACCGGAGCAAACGTTCTGAAAAGTCCATCTATCCCAAAT
CAGATACATATGGGAGTAGGGCGTTGTGGGAATATATTTTAGCAACATCT
GCAGCACCAAAATTTGCCTTTAACTATTAAACTCTAGATACATCCTCTCC
ATTTTCTGTTTGTACTTCCTATTCTTTATTTATTACTCAAACTGGAATCT
ACGGTACAATGCGGTACTGCCTTGAGTCCCAGCATTCTATAGGTTGGGAA
AGCAATTATTCTGATTATGTTGTGTCATGGGCTGGACTTTCATACATGAT
ACCTCAAAGAGGTAAGCAATATGTTGTTTTTTTTAAAAAAATTTATTTAA
TAAATTTGTCAATCTTT
Sequence Length:
18167
Sequence Checksum:
423fa93dc745af697250fc8b3ace7d88
View location in JBrowse:
Gene:
LOC108222772
Gene Biotype:
protein_coding
Gbkey:
Gene