LOC108227467 | CarrotOmics

Resource Type:

Gene

Organism:

Daucus carota subspecies sativus

Name:

LOC108227467

Identifier:

LOC108227467

Cross Reference:


NCBI Gene	108227467

Relationship:

There are 4 relationships.
Relationships
The mRNA, XM_017402615.1, is a part of gene, LOC108227467.
The genetic_marker, MK003832 K1276, is located in gene, LOC108227467.
The genetic_marker, MK011269 6_3607188, is located in gene, LOC108227467.
The mRNA, XM_017402616.1, is a part of gene, LOC108227467.

Analysis:


Name	Description
Carrot Genome Assembly DCARv2	An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below. These sequences can be viewed in JBrowse here. Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100	The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here.

Transcripts:


Transcript Name	Identifier	Type	Location
XM_017402615.1	XM_017402615.1	mRNA	DCARv2_Chr6:3606260..3620218
XM_017402616.1	XM_017402616.1	mRNA	DCARv2_Chr6:3606260..3620218

Sequence:

TTGAAAAACATTGGAAAGTGCGAGAGGATGCCAAGTAAGCAAAACGGATT
AGACTCAGAAGCATGTCACTTGATAACCAATCTATGAATCTCTCTATCTT
CACTTGAACATACACACACCTCTCACTCCAAAAAACCCCAATTATGATGA
TTTTCTCTCCAAAATCTCAAACCCTATCTCTTCTCTCATCTTCTAATTCA
GCTTTTACATCTCCTTGCTCTCTCCGCCGTCAATTTGTCGGCTCCGGCCA
CATATTCCGACCTCCGGGCAACCTCTGCTACCGGAAAAAATGGAAGAAGA
AGAAGAGGATAGGCTTTGACATTGACGCTTCCCGAGGCAGACTAGTCGTT
GTCAAAGCTTCTATAAGTTCGCAATCCATCGTTGTGTTGATTGCAGTTGT
TGCTGTTTCCGCCATTACTGCTGCTTATCTTAATTACCGTCAACGAAAGC
CTAAACAGCACGAGGTTATATTTCTTGTCTTGTTTTCCATGTTTTTTTCT
ACTGTATTTTTTTAATTTTGTTTTTCATATAAATTATCATGATGAATTAA
GTTAGACTACTCAAATGAAATCATTGTTGTTTTCTCAGCGTTTTAAATTA
GGCTTCTAATGCTTGTTGTAGTTGCCTGGACCCGTAGATGATCAAAACAC
TGTCCATGACAAGGAAGATAATGCAGAGCTTGCGTCGTCGAGCCATTCTC
GAACTGCAATTTTGTCTTCTCTACCTGTTCTGCAGGCCCAATCTAATGCT
CACCCTGTCGACTTGGACTTGGAAGAGGAAGAAATCGTTGTGAAACAAAA
TGCTCAGGAAAGTAAATCCAGCTCTGACTTGGCCTTGTCAGAGACGGTTT
CTCAACTAGATGCTGCACTTGTTCTACCTAATCATACGGAGATAAAGGTG
GACCAAGTCGACAAACTGCGTCATGAAATTGAATCAAGTGCTGCAACAGT
TTCTCTAAATTGTGTAGTTAGTGGAGTGGTTGAACTTGATAAACCAAATG
ATGAAACTATTGACGAAGCGCGTGTTGATAAATATGCTGGAAATGGAGAT
TCTGTCCGTCGAGAGCTCCACACATTTTATGAGGCTAATCAGTCTCATGT
GCCACCCGGGGAAAATTCTGATAGTGTAAAGCCAGTGCATTCTCATGCTT
CCTCTAGCGAAACTTATAGCATATATCCACTGAATAGGAGTTATATAAAC
GGAGCAAAATTTTCAACTCTGGACATTCTTCCTACTTCAGGTTGTTCGGT
ACAAATTGCATTGTTCTTGAGATTTAGTTTCACATCTTATGTACATGTTC
TCCCTTTTTTGACTAAAGCGATGATAGAAATTTCTGTTATTTAAACTATA
CGTACTTAATATTAACAGCGATTAATCACTTAATACTTTAGGGAATCATG
AAGGAAGGCCTCATCTTGGATTTTCCGCAGAGGTTTCATTTCGAAAAAGC
AAAGGCTCAGGAAAAAGACACGAGTTTTTCAGTCAAAATGAGAGAGAGAT
GATAGATCAGAATGGTCACAGAAGTTCATTAATCTCCTCTTACATAAAGG
AAAAACACATCAACGAGAGACGTTCTCGTTCTGAAAGATCCACTGCTTAC
AGGCGCCTTCTGAAAGAAGGGAGGTAACTTGCTTATTTCATGTTCTTTAA
ATATTAGATTATTGCTGCCCCAGCCCCCCAACAAATGCTGAAGTAGCAAA
GGTTTCTGAACTAAATTATCAATATGATTACTGGTGAAGTACCTTTTCAC
TGACTCTGAATATTTAATTCATATATTCCTCTTTTGGGGTCAGCTTCATG
GTTTTGGAAATTACTTGATTGAGTTTCGGCCACAGGTTAGTGGACTGCTT
AGAATTGCTTGAAGATATGGAAAAACAAAACTTGCTAGATATGGATAAGG
TATTTTACAAGCTAGATAAAATGCCAATTTCTGATATTAATTTAAGAGTT
GCTGATTGGAGGGGTGCATCGGTCTCAGATATATCATGCAGGATTCTTCC
GGAACTGCAAAACACAAAGAGCTGTCAAAGAGGCTTTTCGTTTCACAAAG
CTTATCCCTAATCCAACCTTAAGTACATTTAACATGCTTTTGTCTGTTTG
TGCAAGTTCTCAACATCTTGAGGGTAATTTGCAAGCATTTTTTTTCTTTA
TTACTATATAATTATTACCTTTAGTTCTGAGACCTATACATTCTATGTAG
GAGCTTTTCAAGTAATGCAACTTGTTCAGGAGGCTGAACTGAAAGCTGAC
TGCAAACTTTACACTACTCTTATATCAACTTGTGCAAAATGCGGAAAAGT
TGATTCAATGTTTAAGGTGTGATCCTCTGCCCCCATCTGTATATATGTTG
TTGATTTAGTGTTTAAGGTGTGATCATCTGCCTATCTTATAATTTACAGT
ATATGCGTGTCTGTTTGTCAATATAATGTATATGAAAGATGGTCAATGGC
ATAGTTCAATATGTTCTACTGTTAAGCAACTCACTTCACACCATCAATTC
AAATTAGTATTAATTGAAATCATGAGGGCGCTAGTTAAGGAGCTCGACAA
ACAATCCACAGAATAATTAAGGATAATTTTGCCTTTTTATAGATGTAGTA
GCTTACAACCATGGGATGCACGGAATACGGAACTACTTTAATATTTTCAT
TTTTTTCATTCATGTGTTAATAATTTATATAATAGTGATAAAGTTCTTAT
ATAAATAATAAATCATAATATAAATAAAAGATTGTAATATTAATAGTTCA
TGTGTGAAAATTTTGTTATCATATAGTTATAATTTTATTTGTATAATAAT
ATTGAATTTAATCACTCGTGGTTGATGAGATTTGAACCTCAATTTTCTTT
ATCCTTGAACCTAATAATATATCTGTTTAAATTTATTATGTTAGGATTCG
AACCTTAAACTTGGTAATATTTTAAATAGTAAATATAGAACATTCTTTAA
TATCATATCTAACGATTTTCATCTATATGTTTGAAAGATCTAACGAAATG
TGGGCTTAACCAAATTAATAAATATACTTATCTTGGTTATAATAATATAT
AATATAGACAACTTTTTAGTCAATTCAGTGCTTGGTTGCCCTCTTACAAG
GATAATTGAAGAATAACTAAATTGTGTACATTGGTATTAACTTTAGTTAA
AATCCAGGAAGCGCAGACTCAAATACGGCGACATGGGAAACGGGTACGGG
GATTCACCAATCATCTAAGAGTCTTGCATGCAAGACTCAGCGAATAATAA
TAAAAAGTAATAATATATGTGAAAATAATAATGAGAAATTTTGCATATGT
AAGTAACACTTAACATTATTACTAGGGAGTAATAAATATCAAACAGGTTA
ATCAAAATATGCATTTGGGAAGTAAAATTAGTCTTTTATTGAGTGTTCCA
CAAGTAAATTAGAAGTTGTGAATTCTGCATCTGAGATAATATATCAGATT
TTTAAAATTTTATTTTACTGTTTGTTTTTAATTTTGTAATTATCTTTCTT
TGATTTAATTATAAAACATGTCAAAACTAGCAAGTCTCTTTTCTTTTGCA
CAATACCATCTAGGAACAAAACTTTATCTATAACTGAATGTCCTTGCGTC
CAATCCCCCAGTACCCCAATTACTCAAAAAATAATTTCAGCATCAAGTTT
AAATATTGTCTTAACATACATGTCATACTGATCCACTCTTCAATCCCAAA
CATGGGCTTCTCGATGAGGGGTGATAGCAAGAAAATAGACAGGAAAGAGA
GTATTAGGAAATAAAGTAGATATGTAGGCAGCAGAAAGCAACATAGTCCT
GTAAGAGGCTAAACTTATTTCTTTGATTGTTGTATTATATGATTAGTAAA
TAGTTAAACAATCCAAAATATAGACAATATCAACTAATATTTGATGGGAG
AAATGTAAAGTCGGAACACAACTGAAAGTTTAAGTATGCATACTGATGAC
TTTAGAGGCTAGAGTGAGTTTTGGGCAACATAGAGGGACGCAAATTACAA
TTTAGTCTTATTATAGTTGTTTTAATATAATATCATGCTCATTGACATTC
ATGAAGTTGTAGGTTTTCCATGAAATGGTTAATGCTGGAGTGGAACCCAA
CGTCCATACATATGGTGCTCTAATTGACGGCTGTGCTAAAGTTGGGATGG
TTGCCAAGGCATTTGGTGCTTATGGCATAATGAGATCTAAAGTATGGTTT
TACAATGATGTATCTTTATCTCTTTTTTTAAGTCTTCATTTATTTTCAAT
TTTCATCGTTTCCTTTTATCTGCAAGCATGGTTACTGTGTCTTGTATCTT
TTTATTTTTCCATATCGATTGCATTTTTGCATGCAGTAGAATGTGAAACC
AGACCGAGTTGTATTCAATGCACTTATCTCAGCATGTGGTCAGTCTGGGG
CGGTGGATCGTGCGTTTGATGTACTAGCAGAAATGAGAGCCGAGACCATT
CCAGTTGATCCTGACCATGTTACTGTTGGTGCTTTAATAAAGGCATGCGC
AAATGCTGGTCAGGTGAATGATCCTTTTAACTAGAAATAGTTGCCTACAT
GTTGATTTATATATACTCACTTTGAGGAACGATCTTTGTCAGTTTTTACA
TCAGTTTTAGTTATTAATGATCTAACGTTTCTAGGTTGTTCGGGCACAAG
AGGTGTACAATATGATCAGCAAATATAACATAAGAGGCACTCCAGAGCTT
TACACCATTGCTATTAACAGTAGCAGCCTGACTGGTGATTGGGAATTTGC
TTGCAATGTTTATAATGACATGAGAGAAAAAGGGGTCATCCCTGATGAGG
TATCACTGTATTGTCACTTTCTACTTGTTGACCATCTGACGTATTCCTAT
TCTGTCAAAAGTCTTGTTACAAATAGCCTATTGGCTTATATTTTATTCCT
GAATGTTGCTTTTTTCTGAATGGTTAGATGGTTGGATTGAATAATACAAT
TAATTTGTCTACACTTCATTTATATTATTAATTAATGGTTTTGACTAAGA
ATCTAGTATCCCAATCACATGGCTAATGGAAACTTACCGAAATAAGTATT
CAGCCATCATACGGTTCTGACTCTTGATTGTAAATAGGCGGCACATGCAT
TACAAAAGAGGTATATTAACTATCAAGTGAACAGTTCTCCAAAAACCATA
AGGTGTTAGGAGGGCTTACGATGATCATATTATAATATTAACACTCCCCT
TACTCAAAAACCCATTTTTATATTGAAGAGGGGATCACGGGCGCCCTTGG
GGAAATAATTTGCATTCGTGTCCATAGTTTTTCTAAAACCTTAATGTTGT
TTTTGGTTTGGGAGAATGGATAGGAATGGAATGGAATGAAATGACTAAAA
ATAATTGAAAGTAATACTGGTAGGAAGGAAGTTTTGACAAAAAATTGTAA
GTGCAAAATTGTTATGATGAGATTTGAGAAAACATTGACTATACTATAGG
AGGGAATGGAGCATTTCTTCTCAAATTGGGGGTGTGAACTCTAGTATAGG
GTTCAAGGAATGGAATGGAGGAAGGAATGAAATTTATAAACAATTACTCA
TAACATATTTCAAATTTCATTCCAGTCCTTCCAAATTCATTAACCCCAAC
CCAAAAAAACATAAGGTGTTTGGAGGAGGACTTACCAGGATCATATTGTA
TTCTAGATACTAACCACTAAGTTGCTACTCATGACTAACATAGAGGGTAA
GATGAAGGCCAGAGCCTGGAGGATACAGTTGAAACTTCTCATGTCTTTTA
ACGTGATTATTGATTAAACCACAATTCACTTCAAGTAGTGATTACTCTAA
TAAAGTATAATTATTATGGTTTCCTACACTGTACAGGCAATTTCAAAAAT
TCCATCTGCAACAAATCAAAATTGCGTTATATATTGAAAGTTTGAAACTG
ACTTATATTCTTTTGAACTGCTTGCTAGGATATCATAAAGCTTACTCAAG
TATTACTTTCATTTTTGCAGATGTTTATCAGTGCATTTATAGATGTTGCA
GGGCATTCTAATAAGCTGGAATCTGCCTTCGAAATCTTACAAAAGGCTAA
AAGTGATGGTATGAATGTTGGAATCATATCATACAGCTCGTTGATGGGAG
CATGTAGCAATGTATGTGAAACCAATCCCATTTACAAGTTTATTGTTTTC
TCTTAACAAAGTTGTTTGGTCTACTCCACTTACCTCGTATTGCATTAAAA
TCGGGCTGCCTAGCCTAAAACTCAAGCTAACCTTGTGAGGAATCAAATAA
TACTTATGCCTATCTTTAGTGGCTGCAGTTTTAGCAATCTAACTTACAAT
AGGCTGTAAGCTTATGCCGAGTAAAATCAGAGAATTTAAGATATGCATCT
ATAATTTGCAATGAACTGTAAAAAAAATGATTTTCAATTCTTTTAGGTAT
TGGTTTCTATCTTGCTAGCTCACGATGTCCATTTATTGATGAAACTAGCA
AGGACAAACCCCAATCAATGCAGACTCTAGTTGTCTTTTAAGTTTATACT
GGTTTTGCAACATACACATAGAATGAAACAGATTGCTAAGTACGCTTAGT
TTCTTTGGTGAACTAGATATAGCAATTCATGACACAGTAGTTATTAGATA
CTCATAGGCTCAACTTATTTAGCCCATGTTTCACATGGAATTCAAAAGAA
TCTGATGATAATGTAATTATGAAGGACTATCACAATTCACAATCTACAAA
CTCTTATTCCAGCGATATGTGACATGCAATCTGGCTTGTTTTGGAGGGTC
TGTGTAAAGACAACATTATTTTTTTTTAGCCAACATAATGACGTGTCTTC
TCCATATCCTTGCATAATACATCCATAAATTTTTCATAGTTCACTCCTTA
AACAGCATTGACAACAAATAACAAAATGTGGATATGCTCATAAGAAGCTT
TATATTGCCACTTCCTATCAGTGGAGACCATTGTCTTAGCTTAAATTTTA
CTCTGACAGTTGAATAGTCTATGCATCATATAAGGGGCTTCAATTCTGCA
AGTACATGTAATCTGCAATCCCTCGCTTCGGCCATTTCTAGGAATTTGAT
TGAATAAGACATGACTTCATTTCAGGTCAAATCTGTAATTTGAGTGGCTT
GGCACTGTCTATGGTTATGGTTTAAAGATTACTTTTTTTTCAGGCAAAAA
ATTGGCAGATGGCACTGGAGCTCCATGAGGAAATTAAAGACATGAATATA
AAACCAACAATCTCAACAATGAATGCCTTAATAACTGCCTTGTGTATGTC
TTATCTATCGTGCTTTGATTATTATTATTAATAATTTATTTCATCTGATG
AATTGAGTAAAGGATGCTTCCCTTTGCTTAAATAATCATATCATAGTTTC
TTTGTTAATTGAACTAGGATAGAAAATTAAATTGAGCAATTACACTGCAG
GTGATGGCGATCAACTGCAGAAAGCACTCGAAGTTCTATCTGACATGAAG
AAAGTAGGATTATGTCCAAACACTATTACATACTCCATTTTACTAGTGGC
ATGTGAAAAGTAAGTTTATACACAGAAAAAGTATGTTCTTGTTATGCAAC
ATAGTCTCGTTTTGACGTTTTCAGTCGTTTGCAAATTCGTAATTCTAAAA
ATAATATGGACTCCCATAAATGTTTCTTGTTAGTTGGTATTATTATTGAA
TTGTAATAAGGTAGACATACTACAAAGTAATTAAGCCTTAAAGTATTTTA
ATTCGAGGATGCAATTTAACACATCAATTTTACATTATAATTCTTAACAA
TTTGACTCTAAACCGTCATAGCAGGGCTATTTGTATAGAATTCAGAGTGT
GATATATGTTTATTTTGTGAGTCAGTGCTCTGAATCTCATCAAGTTGTAA
TACAATTGTAGGAATGATGACCTAGAAGTTGGGCTTATGCTTCTTTCTCA
AGCAAAAAAGGACGGCATTGCCCCAAATCTTGTTATGTGCAGGTGTTTAA
TAGGTAACACAGAAGTTTACTCTAAATATTATTGCTGATATATATGTCTT
CACTTCATTGAATGTACTAGTACTTCATTATGGCTGCGAATACCTTGACT
ATGTTATACCGTGCCTTCTTGTATAATTCTGTACGGAGGTCGACGTTTAA
AATGTAGTATATTCTTAACCTTGTCTCTTTGCACTAAAACTGTACCCCCC
CCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCC
CCCCCCCCCAGATATTGAAGTTACTTTATTTTTGTCTGTAATGAGTCGCA
TCAAGATTGAATTGTAGACAATGAGGAAATGCGATCCATTGTGATGCTTG
ATACATTTTAGGGAGGGCTATGTTAATATCAAGGCGTTAAGTTTGATTTT
CAAGAGAGAACAGACAGTTATGACTCCTTATCTTTTGGTAATTTAAAAGT
GAAGGTAAAAATTATTTACAAGATCTGATTCTACTAGCTAGAAACCTAAT
ATAAGCATACAGGCATGTAATATGTATACAAATCTTATCGCCCTTCACTA
GTGATTAAATTGCTAATTCGAAGGTCAGAGTATTTTTGAAATTTATCCTA
TCTATCACCAAAACATTTTCTCGATTCAGCTGATATAATCATCTCCCTTT
TACTTTTAAATGCATTACAAGTATAGGGTGAGTAAGGATATCCCTGGACC
TCTTTTAGTACCAGGAGCACCTTTGCTATGGCTCGTACACTTCTTGATCC
TCAGTTATCCCCTATCTTTAACACTTAGATACACGATCTGCTAAGAATGT
AAATTTCATAGAAAAGTTGAATTGGCCAAGAACATTTTTGCTCATCTCAT
TATTCAATATTGTATGACATTCTGTACTTAATTCTACCAAATCCGAGGCA
AGTCATATAGATAAGTAAACAGTTAGGCCAAGATTAAGCAACTCATATAG
ATAAGTAGATATAATTAGCCCAAGATTCTTTCATATATTTGTAAGAGAGT
GACTGAGGAAAATTATGTCCAAATTTGACTTTGCTCCCCACTTCTTTTGT
TTGGTACTTTTAACAGTAGGAATAGACAACCTCTGTTAGCTAGTAGAACC
GCAGAATGGGGATAAAAGTTAGTTTTCTGTGTGTAGTTGTCAAGCTTTCC
CTATATGGTACTTGTGTTGATCTGTCTTGAAATCAACACATTTTTGCATA
ATATGTCGTGCTGTCATTTCTTCAACCACATCCTTGTATCTTTCATTTAG
AAACTCCGTTATAATATGGGTGATCATGCTGTATGCTGCTTTCTTAGTTC
TTCACTCTGTAATTGGTCATCTTCTGTTTTACATGTCCGAAGCTTTATGC
TTGCGCCGATTTGAGAAATCCTGTACACTTGGAGAGGATGTCTTGTCTTT
GAATTCTGGAAGGCCACAGATCGATAGTAAATGGTACACATCTGCTTCAC
TCAACATTAAGCTGCTTTTTAGTACATGTATTTTGATTGAGGATAGTAAC
AGATCAATGCAGAAATAAGCAATTGCCCTTGAGATATGAATAAAAATCTT
TATGTTATAACCTTAAGCATTTGTTTAGTTCATTGACTTAATTGCAGTGC
GGAAGATATCTTGTTTTCCTTCGCATATGTCAAAGTGTTAAATCAGCATA
CTTTTGCTCATTTGTAAATACGTCTAAAAAGGTTTCAAAAATGCTTACGT
TCATATAGTCATTTACACGCCGTATAGCTGACGAGATGTAAGCAAATGCA
TATCTGTGAATGTCTTTCTATGTAATGGCCCAATTAAGCATGCTCAGCCC
CTTTTAAAAAAAACAAACGTACAAATTATCCTTGTGTTTGGTTATAATAG
TATAACATAGATATGATTAAGACTCCGCGATTCTTGAATACTGGACCTAA
TAAAATATATGAAATATATATTTTCTTTTTTATATTTGAGATATTAATGT
AATGCTTATAACTTAGATATTATGTTACCGTAATATATACACAAACAGGC
ATATCGAGTTTAGGGCTTGGATCGGGTTTGAATTGGGTTTTGGATCATGT
CTACACCTCTATTCCAAATCAAAATTCGAACTTTTTCGAGTTAAAAAAAT
TAAATCCAATCGAATTTCAGGTTTGGTAAAATACAATTGGATCCAAATGA
ATCAGGCATCAGTTGGATCGGATTGTTTTGCCACCCCTACTTATAAAAAA
TCATTGTTTTCTTTTAATTAACCGGCCCATCTAAAATCTCAAGGTCACAG
AAAAAGGCCTCAACAAATTCTTATATTGTTTAAGACTCCCCTTAATCGTA
CTTGCCAATAGACACACAAACAAATAATTACATAAAACAATTATGTTAAT
GGCTTAATGAAATATGAAGAAGTAATGAAGTTTCTGATATGAGCTGTTTT
TTCTGCAGGACATCGATAGTCTTAAGGGTTTACAGGGAAGCAATTATAGC
TGGTGTGGTTCCTACAACTGAAGAGTTTTCACAGGTTTTGGGATGCTTGC
GGCTTCCTCATGATTCGTCTTTGAGAGCTAGACTCATTGAAAATCTTGGA
GTTATTGATAGTACATCAAATAACTCAAACCTTTGCTCACTACTCGATGG
ATTCGGGGAATATGATCCCCGTGCTTTCTCATTACTTGAGGTGTACAAAC
AACTTTACGTCTTTGATATATATTTAAAAGATTCCGTTACACAAAAATGA
GTCTATATTTTAGCTTTGTTACTCGGACTCTCCATTTTTGTCCTTTTGCG
TGTGTCTAACAGACGTGCTATGCGTGTGGGTATGGGATCTGAATCGGATC
CTTGATCTGAATCGGATCCATGATCTTAAAACCGGGCACTTTACCCTTGT
AGCATCTAGTTCAAAATGAAAATTAAGGTGTTGTTACAACTTGTTTACAA
GAGCAAGGTCCATAAATGACTTGTTTAAAAGAGCAAGGTTCATAACTGAC
TTGTATAAATGTTATTCAATTGTTTTTATGTTGCAATTTAACATACATAA
TCAAGCATATGTGATTTATGTGTAGTAGAAATTAAATTTTATGAATGTAC
AATAAATTAGCCTGTATGATGTTTTACTTGTATTAAGCTTACTTTTATTA
GGATCCATATCCAAGAATTATAATCATCCTAAAACTATGAATCTGACTCT
TGGATCCGCACACGTGTTCGACACCCATACCCGAGTGTGGGTAACATAGT
GAGTGAGTGGAAATATCATCTGTTTTTGTGTTTCATTGCAGGAAGCTGCT
TCACTTGGAATTCTCCCTTCTGTATCTTTCAAAGATATTCCAATAGTTGT
TGATGTGCGAAACCTACAGATTCATAGTGCAGAGGTGATTATCCTTAAGT
GTCACTAGAATACTGCATTTACAATTTAGCAGAGGGTAATATTCCCTGCA
AGTACCGGTATTTGTTTTCCTAGAGTAGTGGCACTTTTATGAATTAAACT
ATCTAGGGGCTATCTTGACACAGTAATATACATGTTACTGAAAGTGTAAA
GCCTACGAGCACGTTTATGTACATCTTTATTCTAGTATGTTCTAACTATA
TTGCTTCCCTGATGCTGTTTGTGATTTTTTTTCCTGAGAATTCGCAGGTG
TTTCTCCTTACAGTTCTAAAGAGTCTGAAACATCGTCTTGCCGCTGGTAT
ATATATACATCCTTATTTAAATAATATTTACTTGACAATTTCTTATGTTT
AAGAATGCTGAGGACCAAATCGTAACAATGACCTCAGTTCATTAATCTGA
AAATTTATCAGTGCATTTGCTCTCCATTGGGGAAATTCTATATATCAACA
TCTTAGTTGAAGCAGGATTTATAAATCTGAGAGTATGCTTTATTAACCTT
GACATCTCGGACCTCCTGTAGTTTCTGCCATGATGCTTGGTTTACTTATC
TGGCTGGCCTTCTTTTATAATTTTTGTTTATCTTTCAAAATTGTTGCTGT
ATTGTCAGAACAATGTTACCAGAATACGATGGTAGAAAGTTATTATTGCT
GTAGATTATGACTGGATAATATGAAGAAGTGGATACCAGTCATTCTATAC
TGAACACTTTTTTTCTTCTTTTTGGTTCTTTGGTTTTTTCAGGTGTAAAG
TTGCCTAATATAATTATATTACTACCAATAGACAAAATACAAGTTCAGTC
TTCAAAGGGGGACAAGATGATAAACCTTGCTGGAAGGTATGATACAGCAT
TTTCAAAACTAATCGCACCCAAGTCAATAAAATACTTTTAGCAATTTCAA
TGCAATAATGTCAGCTATACCTCCGATCTATGTTGTATTTGAATAATCTC
AGTGTATGAGAAATTATAAAACTAAAAAGTATATGCATCCCATTATTTTC
AATAAGAAGCACACATATTGAGACCAGTAATTTATTAGAAGGAAGAGAAG
AAGTCCAAATTGTTGTTTTCAAATAGGGCAAGCCAGAATTTTATAAAAAG
TATATGCACCCCATTATTTTCAATAAGAAGCACACATATTGAGACCAGTA
ATTTATTAGAAGGAAGAGAAGAAGTCCAAATTGTTGTTTTCAAATAGGGC
AAGCCAAAATTGGAATTCGTGCTCTCGTAACAACCTTTATTCTAATATCT
TTTGTTCTGTTCTATTTTCAAACTATAGTTTTTGTAGCAACCTTTTTTCT
CAAACTGTTATATTTTCTGGAGTAATTGCGTAGGAGATCTGATTTGCAAT
TTTCGGTTCACACTAAAGATAGGAAATTTGAGAAAGACGTTTATGCTGCT
GATTTGGGCAGTGGTCTGGAATAGAGATAGAAGAACATGTTTTCAGTAGT
TGTAACAGCCTGCCTACTTGTCTAAGTTGATGGGGCATAATTTACCATGT
TTGGAGTGAAGTATTGTAATGTCTCTAAATATTTGAGTGTTCTGTCTTGG
AAAACAGGACTAGCCGTGCAGTTGCAGCATTATTGAGGAGACTGGCAATA
CCATACATAGGAAATGAATCATTTGGGAAAATTAGAATGAATGGAGTAGT
TGTAAAGAAATGGTTGCAGCCAAAACTTACTTCCCCTTTCAGGGGTAAAC
TATCAAATTTGAACTCATCTCAATCTCACCTTGGTAGAAACATTTCTCTG
CAGCAACGTAACATACGAATCGGTAATCTGTCCCTGGAGTGAGGAGCTCT
AGTGAGGAGCTCTATGGATCAGAATGGTGTTGTCTTGTAGAGTATGATTG
ACTCATAGTCTGCGAAGGAGCAAAAGATTGAGTTGCCACTGTAACATTTT
TGTTCGTAGGTGTAAAAAGTATGAGGAAATATTTCTTGGTTATGTCTTTA
GCATTGTTGTGGATAGTCTAAGGTTTACCAGAAAAAATTGTATCAAAATT
GTGATTGTTGCGGAATGGACAAACAAGAAATACTAGATGTAAGAGGCATA
TGGATGGTAGTATTTTGTAAATTGAGAGCACTAGTAGGCATGAAGGTTCA
TAATGGCTAGGGTCTGAGAGATTGTAGTATAAATACTGTAATTGCTTTAC
ACAAGAATTGTTGAGATTTGGTTGAAATATTTACAATACAAACTTTCATT
TTTCTCTC

Sequence Length:

13958

Sequence Checksum:

c8089c33da5f21fb5670e156cf098f8b

View location in JBrowse:

DCARv2_Chr6:3606261..3620218+

Gene:

LOC108227467

Gene Biotype:

protein_coding

Gbkey:

Gene