LOC108227368 | CarrotOmics

Resource Type:

Gene

Organism:

Daucus carota subspecies sativus

Name:

LOC108227368

Identifier:

LOC108227368

Cross Reference:


NCBI Gene	108227368

Relationship:

There are 4 relationships.
Relationships
The mRNA, XM_017402476.1, is a part of gene, LOC108227368.
The genetic_marker, MK011276 6_3913857, is located in gene, LOC108227368.
The genetic_marker, MK003474 K0918, is located in gene, LOC108227368.
The mRNA, XM_017402475.1, is a part of gene, LOC108227368.

Analysis:


Name	Description
Carrot Genome Assembly DCARv2	An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below. These sequences can be viewed in JBrowse here. Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100	The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here.

Transcripts:


Transcript Name	Identifier	Type	Location
XM_017402475.1	XM_017402475.1	mRNA	DCARv2_Chr6:3907676..3921846
XM_017402476.1	XM_017402476.1	mRNA	DCARv2_Chr6:3911554..3921847

Sequence:

TATAAATATTGTATGTTTTTCCGCACACCTTTTGTCTTAAAGTGTAGTAC
ATTAACAAGTGTTGTCAAGTGTATAGAATAGAGAGAGAGAGAGAGAGAGA
GAGAGATGGAGAGAGGAGGTCAAGTAAGAATTGGCAGTGATGATGAAGAT
GATGTTGTTGTGTTTGCAGTAAATGGAAAAAGATACGAGGTTTCAGTACA
CCCCTCTACCACTCTTCTTGATTTCTTGCGTTCTTCTACCCCTTTCAAGG
GTGTCAAGCTCAGCTGTGGTGAAGGTTTGTCCTCTTTTTTTTCTACAAAA
ATTTGATGAATTTGGAATCTTTAGTCCTTATGTATCTCCATGGATTTATA
CTTTTACTCTCTTCTAAGACCTGTTTTGCTTTGATTTTCTTTTCATCTTG
GCTCATTGTTATGGGATGCAGCAACATACCTCATATATTTCTAATCTTTA
GACTTTATTTTGCATGTGGCTTCTTAAATTTGTAGTCTTTATTCAAAGTT
TACAAATTGGGTTCATGAATTTGTAATTTTTATTCCAGTTTTGCAAAAGG
CCTCTTAAATTTGTAACCTTTATTCTTGCTTTTGCAAGTGGCTTCCTGAT
TTAGAATCTTTGTTCTCCATTTCTTTGCTGTTGATTCGTTTTGTAACATA
AAGTGGTTTATTAGGATTGCCAATATATGAAAATGCAATCTTTGTCTAAT
ACTATATACTGTACAAGATAAAATTGTGGTGTCTTTGTTACTTTAAAAAA
AATTAAAAGTGAAAAGCTACACTGTTTATTCAAATTTGCCATCTTATTTC
TGGGCTGGCAACATGAATTGAATTTTTGGAATTATCAAATTTTAAAGATA
ATATCTATGAATATAGAATAGCATGTAAAAGTATGTTTGTTACAATTGCA
GGTGGTTGTGGTGCTTGTGTTGTTTTACTGTCTAATTACGACCCTTTGCT
AAAGAAAGTAAAAAGTTACACTGTGAGTTCATGTCTTACACTTGTTCATA
GTGTAAATTATTGCTCAATTACAACAACTGAAGGACTTGGAAATAGCAGA
GATGGTTTTCACCCAATCCATGAAAGATTTTCTGGTTTTCATGCTTCTCA
ATGTGGTTTCTGTACGCCCGGAATGTGCATTTCGCTGTTCTCAGCGCTGG
TCAATGCCGAAGAGAAGCAGAGGCCGGACCCCCCTACAGGATTCTCCAAA
CTCACTGTTTCAGAAGCTGAAAAGGCTATATCAGGGAATCTGTGTAGATG
TACTGGATATCGACCCATTGCAGATGCCTGTAAAAGTTTTGCTGCTGATG
TTGATCTGGAGGATTTGGGAATGAATTCCTTCTGGAGAAAGGGAGAGAGT
AATGAAGATAAACTAAGTAAATTACCTTCTTATAATCCGAAAGATGATGT
TTGTACATATCCTGAATTCTTAAAAAGAGAATTGGAGTCTACAATGTATT
TGAGCCCTCATAAAAAGTCTTGGTACAGTCCTCGCACTCTTGAGGAGCTC
CGAACTTTCACTGACCCAAAATTGTCTACAACTCGAACTAAGTTAGTTGC
TGGTAACACAGGAATTGGTTATTACAAGGACCTTGATCAATATGAGAGAT
ACATCAACTTGAGGAATGTCTCTGAGCTTTCATCAATTAGTAGAAACGAG
ACAGGGATGGTAATTGGAGCAACTGTCACAATATCTAAAGCTATCTCAGC
ATTGAAAGAAAAAGTAGGTGGCGTCGTATGTTCAGATTGGGAATTGATAT
TCACCAAAATTGCTGAGCATATGGAGAAGATTGCTTCAGAGCCTGTTCGT
AACTTAGCTAGTGTAGGGGGGAATGTGGTTATGGCACAAAGACATTGTTT
CCCATCAGACATTGTCACAGTACTTCTTGCTGTGAGTTCTACAGTTGATT
TAATAATCAATACAAAACGTGAAAATCTTACATTGGAGGACTATCTGTCA
AAGCCACCATTGGATAATAGAGGGGTTCTATTGAGTATCCAAATTCCTTT
CTCGACCTCATTTACAAGTAACTTCTCTACCAAAACTAGTAAGTTGGTGT
TTGAAACTTATCGCGCTGCTCCAAGGCCACTTGGAAATGCACTCCCTTAC
CTAAATGCTGCTTTTTTAGCCATTATTTCACCAAGTAAAATGGGATTTGT
GATAAATAAGATTAAGTTAGCTTTTGGTGCTTTTGGAGCTAAACATGCCA
TGAGAGCAAGGGAGGCTGAAGAATACTTGGCTGGTAAGCCTATAAGTTTG
AATGTTCTCTATGAAGCTATTAACATAGTTCGAGCCACTGTGATTTCCAA
AGATGGAACTTCAGATGCTACTTATAAATCAAGCTTGGTTGTCAGTTATC
TTTTTAAGTTTCTTTATCCCTTGTCTGATGGCGTTGTTTCGGTTTCCAAT
GGTTTATCTACTCATAATTCTGCTAACAACTTTAAAGATGGAGACAACCT
GTCAAATGATGCTAAAAAGCCTTCACTATTGTCATCTGGAAAGCAGCTGG
TGGAAACAAGCAGAGAGTACTATCCGGTTGGTCAACCAATTGTTAAATCC
GGTGCTTCTATTCAAGCTTCTGGTTAGTTATGCCTCCTCTGTCTCTTCAT
TTCAATTTATACCTGATGCATATTAGTGCGGTAAATGCATCAAGAAACAT
AATAACTTTCTAGACATTATGTTTGGGAGTAATTTTAACATTAGCTGATC
CATGTTCAAATAGAAAATATCTTTCTGACTGTTGTTTCCCTCATCAATCA
TATAGGCGAAGCTGTTTATGTAGATGACATTCCTTCACCATCAAACTGCC
TTCACGGTGCATTTATATATAGCACAAAGCCACTGGCAAGGGTGAAGAAT
GTCCGATTCAAGACCAAGTCACTACCAGATGGAGTAACTGCTGTTATAAC
CTACAATGATATTCCAAATGGAGGGGAGAACATAGGTTCTAAGACCATAT
TTGGTACAGAACCACTGTTTGCTGACGAAATTACCAGGTGTGCTGGCCAG
TGTCTTGCTTTTGTGGTAATTTTGCTCTATCCTGGCTCTTGTATGTATTT
TGATCTATGGTATAACTTATTTAATGACATACAACAGTCTTTTATGTTCT
TTTTGTAATATCTTATTTAGGCTGCAGATACACAGAAGCTTGCAGATAGG
GGTGCATCTCTGTCCCTAATTGATTATGATACTGATGATTTAGAGCCACC
TATATTAACTCTTGAAGAGGCTGTTGAGAAATCAAGTTTCTTCGAAGTTC
CTTCCTTCTTATATCCGGCCCCGATTGGGGACTTCTCGAAAGGCATGGCT
GAAGCTGATCACAGGATTAACTCTGAGGTAATTGGTAATATGCTTTTCAT
TAATAAAGTACTATTTTTGTAAAATTGACTTTTGCTTCCCTTTCAAATTG
TTTATATATTTGTGCGGTTGATTTTCAGATCAAACTTGGTTCCCAATATT
ATTTTTATATGGAAACACAAACTGCCCTTGCTATACCAGATGAAGACAAT
TGCATGGTGGTGTATAGTTCTATTCAGTGTCCAGAGTATGTACACACAGT
TATTGCAAGATGTCTTGGTATACCTGAACATAATGTTCGAGTTATCACGA
GAAGGGTTGGAGGAGGTTTTGGTGGAAAGGCAATAAGGGCCATGCCTGTA
AGTGCACATGTCAGAATTTCCATATTATTTTAATAAATCCAACTTCCTAC
TAATTACAGAATATACTTATCTTTTAATTTAAATAATTCATGACACGACT
TCATTCTTTTAATTTTTTTTTGAAGTAATGGATTGCATGATAATGTTGTT
AGACGCTTCAATCGACTACAAGATGGATATTCTTGGATTTATACTTATAT
TGTTGGTAGGTAAACAATTAAATTATTCTTATCGTTTGGTAAACCAATTG
AATTTTTATTGTTAATGGGTAAACCAATTGAGTTATTCTTGTTTTAGGCC
ATGAGGACATAAAATGAAAAGAACCTATATATTAATATGTATATATGAGT
TTATACTAAATCGACATGAAGAGGGGGAGGGGGAGTGCTACCGTTGCACT
TTAAGTTTCTCGTATAAGATACCACTCTGTTACCCAAAAGTTAGTCAAGT
GTTAAAATATAAGAGTATCACATCTAAAAGTTAAAAAGAACGTTGGAAAT
GAGAGTATCACATGTAAAAGTCAAAAAGTTGCGGCATTAGCTGCTAAAGT
CCATAGAAATTTGTTTCACAGAGAATAACGTAAACATAATTATTGTTACT
TAAAAAGTTATTTCCTCCGTCCCTCTCATTTATTTACGGTTTTTTTCACT
GCTTGGCAAGGATTTTAAAATGTATATAAAATATATAGTTTCATAACTTA
TTTTTGAAATTTTATATTTTTAAATAAAAATTTAAACATTAAATTTTTTA
TTCAGAAGTACAAAAAAGTAAAATAATTTATGAAAATATACTTTATAGGA
GCCTTAAATGGCGTGCGAAACCATCTGTCCCAAATTTTTAAGAACCTGGA
GGGACAGAGGGAGTAAATTTAATAAATCAATGAATGAAATCCATATACCT
GGTCACTTTATTTGCTAGGTAAAACAAAATAACACAAATTACAGTGGAGG
GATAGCACCCTATTGTATGTAAATTCGTATGGTATATATCATATATATTA
TGTTTTAAACTATATTTTGATGTCTTAGACTTTGTTTTTTTCCAACTATT
TTGACAATGCTGTTTATCGATGTAGTAGATAGTTACGAATGCTGAAAGTG
TGGAAAATATAACGTTTATATGGGTAATTATGTCATTTACTTATATTTAA
CATTTGTTTAATGTTCACGTAGTGGAATGGTATTGTATCTGCAAAACTCA
AAATATAAAGGGTGGCACTCGTAAGTCAAACACATGAACTAGCAAATCTG
GAATAGCCAAATATAGAAAGGTACTATTAAGAATTTCCTTTATCTATTGA
ACGCTTCATGTTAAATTCTCTCCAAAAATATATGTGAAATACAACATTTC
ATGCTGACACTTTACATCATTGGAGTCTTGTACTTCCATAATACTAAAAA
ACGTAATGAAAAGCCAAAGAAGCTAATATGTGAGTACTATATGGATGTAT
CTTATAATCTACTCCAGGTACAAGCTAGTACAAGCTAGTAGTCTTATATC
TCTGCAAGACTGCAACTACTTACTATGTACAATGTTGATATCATACAGTA
AACAAAATCAACAAATGCAGCCTGATCTTCTGACACTCCCCTTAAGTTCC
CCTTTTGCTCAGTCAATTTTGACATTTATTATACCATTCTCTCAATGTAA
TATAGATTCCTACGCACAAATACTTGTTTAGACTCATCCTTTGCAATATT
AGTCTTGTCATTAGATCTCTCATTTCTGTACATGTAATATACTTGGTATA
TCAAATTTTAGGTAGCAACAGCATGTGCACTTGCAGCATACAAATTGCGG
CGTCCTGTACGAATGTATCTTAATCGTAAGACTGACATGATAATGGTGGG
AGGAAGGCATCCCATGAAGATAACTTATGATGTTGGGTTCAAATCCGATG
GAAAGATTACAGCCCTACACCTATGTATTTTGATCAATGCAGGGATGTCT
GCAGATATAAGCCCTATTATGCCAAATAACATGTTGGGGGTGCTTAAGAA
GTATAATTGGGGAGCCTTATCTTTTGACATTAAGGTATGCAAAACAAACC
ATTCCAATAAATCTGCAATGCGAGCCCCTGGGGAGGTGCAGCCATCTTTT
ATTGCAGAAGCTGTAATGGAACATGTTGCCTCTATGCTTTTCATGGAAGT
AGATTCTGTTAGACACAGGAACCTTCACACATTTGATAGCCTCAATTTAT
TCTATAAGCATAGCGCAGGAGAACTTGTGGAGTATACTTTGCCATCTATC
TGGGACAAATTACAGGTAACATCGAATTTTAGCCAAAGAACTGAAATGAT
ACAACAGTTTAATCAAAAGAATTTATGGAAGAAAAGGGGAATTTCTCGAG
TTCCCATTGTGCATGAAGTAACCGTGAGACCTACCCCGGGGAAAGTAAGC
ATTCTTTCAGATGGGTCCGTTGCTGTAGAAGTTGGTGGGATTGAACTTGG
GCAGGGGCTGTGGACGAAGGTCAAACAAATGACTGCATATGCACTTGGTA
CGATTCAATGTGATGGAACTGCAAACCTTGTGGATAAGGTACGGATTGTA
CAAGCAGATACATTGAGCTTAATTCAAGGCGGGTTTACAGCTGGAAGCAC
GACTTCTGAATCAAGCTGCGAAGCAGTTAGAATTTGCTGTAACATTTTGA
TCGAACGACTCTCCCCTTTAAAGGAAAAGTTGCAGGCTCAAATGGCTTCT
TTGACCTGGGATACTTTAGTTCTCCAGGTATATCTGATTTCTTGATAATT
TAGTTCTTCAGGTATCTCTCATTTCTTGATAAGAATTTATCTAAACCTCT
TAAATTTCCTCATATTATGTATCTCCTTGCAAGCACTTTGTTTTGTTTTT
CACTTATGCGTGCCGTTGGCTTTATAAATGATATTGCATGAGGATATTCT
TCTTAAAGGTGTACACTGTATATGTATTTAAGAGACCTGCATTATTCACC
CGTCAGATTAAAAAACCTCACGCCATCATGATTGGATCAGAATTAAACTG
CAATACAGTATATGCAGGTACTTGACTGGATTAATTTAAATGTACTAAGG
ATCATCAGGGATCAATACTTAAAACTGTATTAACTATTACGTGTTATTTG
GTAAAGGTCAATAGCAAGAACTTAAATACTGAAGCATAATGCACACATGC
TTTCACTGGTGCTCGAACCTTGGACCTCTTATTATCAAGAGAGAAGATGT
ATTCATTAGCGTAAGCCTTGCAGATTAAGTGCTTCGGATGGTAAATGGTG
GTTATAGTTGGATTTTATTCAAGTCTAGTATGATGACAACATACCAGAGC
TCTGTACTTAATTGTGTTCTATACTTATCAAGTATAGGAATAGGATCCTG
ACAAAAGAAAAGAGTATATAACAACAAACTTCTATATTTTGTGATGAAAA
CATATGAGAAAAATGTCTCCAAAGTTATTATAAAATGGAAATGATTTAAA
ACTGATTAAATTGAGCTGGAAGAACAAATACAAAAAAGAAAAGAGAAAAA
GAAGCTAACAAGGAGAAAGTACGGCTGCATGCTACAGAGCAGCAAACAAA
AATTTGTAGGCTCCATCCCCTAGTTTGCCAGTAAGCAGAAATGTCAAAAC
ACGATTCAGTTAGCTTATTTAAGGATTTCTGAGAATCAATTTGAATTTAT
TAGACTTTACTCAATAGGCACTAAATATAACACTGCTGTGAAGCTCTAGA
CATTTAGTTAATCACAACTCATGGCAACAAGCTTGGACAGAGTATCTGCT
GTATCTCATGCAGATAATTCCCTCAACATGCAGGCACACAGGCAAGCTGT
GAACATGTCAGCAAGTTCGTATTTTGTGCCCGACTTCGGTTCCATGCAAT
ACTTGAATTATGGCGCTGCAGTAAGTGAGGTAAGCTGCCTCCTGAATTCT
AATACTTATTTTTCTTGGCATCTCGGTATATATTTAAAAAGATAAGTGTT
TTGATATATATCTTGAACCAACCTTGCATGCAAACAATACTTTCTGTTGG
TTTTATTGAGGGAAAAGAAGAAAATGTCAGATGATTTTTACTAATCTCAT
TTATGTATTCTGTCTGACAACCCTCAGATTTGGGGTCTAGATCTGGTGCC
ACTAAAACCAAAATAACATAAACTCGGAATAAGAAGAGAAAATAAACTCG
ACCCCCTAAAATAGGATTGTAAACAAGAAACCGAAAACTATTACATCTAT
TACAACATATGTTATGTCACTAGCAAGACCTCGACAAGAAGCGTTGCTAG
CAATCCAAAAATATAAACCTGTTGACAACTTAAACTGAATACATACATAG
CTCCTACATCTGCACAACATCCGCTGCCTCAAAAGATCAAGCTACCCGCC
CACCTACATCACGTCTAAGAAACTGCAATGTATTCCTAGCAGCGTTCTTA
AGGGTAGTCTTAATGATACGAACCATCCTTGCCCCTATCTGAAAGAGTTA
GAATAATAGCAGTGCTCAGCTATATAAAAAGAACAAATGTAACAAAATGA
TAGGGATTAAAATGACTGATCTCAAATGTAAATTGTCAGGTATTTTCAAC
AATAGAGAACAACACAGATAGATTTATAAAAGTATGGCAATTACAAGGAG
TTTAACATTTAAAAACTATTATGTGAAAATCATCCGCCTACGGTGCATGT
TCTGCGTCGGTGATCAGCCGATCATCAAGCACTGGATACAGTCCCACATT
CTGTCCCAAAAAGAACAAAGGGGTACCTAAGGCACACGTTGGCCTAAAAT
AATGTAACATGTAACTAACGATCGGTACCGCAGTCCAACAAATGAATTCC
GCCTGGTTATGAGGTTTTATAATTAGTTAGTAACACTTCTATATTAAAAG
CCTTTTTAAATTTTTATTTTCATTTCACTATACTCGAAGGTGTCAAATCA
TTTTAAATCAAAATTCATGGGGCAACTCTCCGTGTATAGCACTTTCCTGT
TAACCAAGTTTAAAAATCAAGTTTAATGTGGTTTAGTTCAACATTCTCAA
TGTGATATAATGTCAAGGGAATATTGAACAAGATATAATCATTTGCCTCG
TAAACAGGGTTATGTGTTTCCGAATAGAGATTCCCAAAAATTGTAAGGAT
CATTCCAGGTAAGACACAAGAAACTGAAGTCAGCAGTATATATGTATCAT
GGAATTGAATTATAAACAGGACAATGGAACTGTTACTGAAAGACAATAGA
AAGAATAGAAGAGAGAGGGAACTTGCCCTGGTAACAGCTTTCTACTATAT
TTTAATGGTCTATTTACTGCCTGACCTGGTCTTCTAGCTGGTCCCCCCCC
CCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCC
CCATCCAGAATTCTGGTTTTGGATTAAAACGAGGTTGAAAACCTGTATGT
GGTGGTGCTCCTTCAGCTGTCTCTGCCTTCCTCTTCTTGTTATCTTCTTC
CTTCTGTGAAAAATCACTCTCTCCATCTGTACCACCGCTGTATATTCTCT
TAATTCAAACATTGCAATTTGCTTCTGATCCACTACTTTAACCTCTTGTG
AAATTGTTTAGCTCTTTTCACTTCTGAATCCATATAATCTGGAACAACCC
TGGATAATTCGGTGCATTTGGCCTCGTAGTTTACTACACTTGAGTTCTCT
TGCTTTAATTCTAAAATTTTTGATTTCAATCTGGTCCTGCATATACGTGG
GGAAATACATATAAAGATTTACTGAATTATTCCTTGAGAAGTATTTCCCC
ATGTATATGCAGGAGCAGATGGAAAATCAAATTTTTAGAATTAAAGCAAG
GGAATCGGAGTTGAGCAGACTATGATGCCACCAAATTCACCGAATTATCC
AGGTTTATTCCAGATTATCTGGATTTAGAAGCGAAAAGAGCTAAACGATT
TCAACAGGGGTTAAAGCAGTGAATTGGAAGCAGAGTCGCAATGTTCGAAT
TAAGTGAACATAGAGCGGTGGTACAGAAAGCCATGATTATAGAAGGAGAG
GGCGATTTTTAACGAAAGGAAAAAGATAACTAGAAGAGGAAGGCAAGGAC
AATTGAAGGAGCACCATCATAGAGAGTTTTTCAACCTCGTTTTAATCAAA
GACCAAATTCCAACCAGGGAGGCGGGAACCAGCTTAAGAGACCAGGCCAG
GCAGTAGATAGAGCATTAGAAGATAGTAGAAAGCTATTATTAAGGCAAGT
TCAAGTTCACTCTTTCTTCTATTCTTTCTATTGTCTTTCAATAAAAGATC
CATTGTCCTGTTTATAAATCAATTCCTTGATACATATGTACTAGTGACTT
CAGTTTCTTGTGTTTTACCTGGAATGATCCTTGGAATTTTTGGGAATCTT
TATTCGGAAACACATAATCCTGTTTACATTAGTGGCAAATGAATGATTAT
ATCTTGTTCAATATTCTCTTGATATTATATCACTTTGATAAGGTTGAACT
AAACCAAATTAAACTTTAGATTTTCAAACATGGTTAACAGGAAAGTGCTA
TACACGGAGAGTTACCCTGTGAATTCTGAATTAAGATTATTAGATACCTT
CGGCTTCGGGTATAATGAAAATAGAAATTGAAAAAGGCTTCTAATATAGA
AGTGCTATTAACTGGTTATGAAACCTGTTAACCAATTGGGACCGTGGTGC
CAGTCGTGAGTTACACGTTACATTATTTTAAGCCAATGTCTGCCTTGGGT
ATCCGTTCGTTCTTTTTGGTACACACTGCAGGACTGTACCTGGTGCTTGA
TGATCGGCTGATCACCGACACAGCACATGCATCATAGGCGAATGATTTTC
ACATAATAGTTTTTAAATTTTAAATTCCTTGTAATTGTGATACTTGTATA
AATCTATCTCTACTGTTCTCTATTGTTGAAAATACCTGTCAATTTAAAGT
TTATATCTAAAGTTCTATCATTTTGCTCTTTTTATATACTTGTTGAGCAC
TTCTTGCTCACTCTTGCTATTGTTATAACTCTTTCAGCAAGGGGCAAAGA
TTGTTTGTATCCTTAATACTACCTGTAAGAGCACTGCTAGGAATCCATCG
CAAGTTATTAGATGTGATGTAGGTGGCCAGGTAGGTTGATCTTTTGAGGC
ACCGAATATTGTGCAGATGTAGCAGTTCATTCTGATCTCTGGCTAATTCT
ACTTATCCAATAGCTAACAATTTAAAAATAACTTTAAAATAATCTCGAAA
CTCCCTCTTAATTCTAAGTACTGACCGATGATGACATCATCATTTGCTAG
AAACTTCTCTTCACAAACTTCTTATAGGTGCTCTTCTTACCAGTTACAGA
TGTTGATGCACTTCTCATCATCCACTTACTGCCTTTAGGACCTTTTTTCT
TTAAATCAGGAGCACTTCTCACCGACAATTCTACTTCTCTATTTCACACA
TCTATGGTGTGCCAATGTTTTTCCTTTCCTCTTTGAACCTCTCGGTGTTC
TCCCCTGAGAAGCTTTATCATCAGCGTCAGAATCTTTAACACCATAAAAA
GCGTCTTTGTTTTTTGGCGGTTCACTCGTAAGCAGCTTATTTTTAACACC
CAGTTTTCTCAATCGAACTAGCTCTTATAGCAGTTGTTGTTTTCTCATTG
GAGAGAAAAGAAGAGAATGTTAGATGATTTCTACAGTTCTCATCTATACA
TATTGTATACATCAATTTTGATCTATATATTTTGAATACATTAATTTGCC
TTTTATGGGCCAAGACATATTGATAAACATCCTTCAAAGATAGGATTCAA
AATGCATACCACTACTAACTTATTCATTCTAATCTCTAACTAATTCTATC
CGGTAGCAAACAATTTAAATAATTAAAAAAAAATTAAATAACGTTGAATT
AATCTCAACACTTCTCTAACAATGCTTTTACGGATGATGAAACTCTTCTT
TGAGGAATATGATATATAATGCATTAAGTCTCATTACTAACATGCTTAGG
GAGAAATATATTTGTATCTCAGGTGGAGATAAATACTCTGACCGGAGAAA
CTACAATTCTTCGCTCGGATATCATTTATGATTGCGGACAGAGCTTGAAC
CCTGCTGTAGATTTGGGACAGGTTCGTCAAATTTCATAAATCAGAATTTC
ATTCTTTTTAATCTTTCATTTGTCATATTCTACTTAGTTCTGAGCAATTT
ACCACATTTGGTCCTTTACATTAGAAATATCTGATAAGACCATACTGACC
AAATAAAGCATAACTAACCAGAGTTGCTAAAAAAAAAAGCGCAACTAACC
CGAGTTGCTGATAAAGTACAACTTGGATGGATCCTATCTGATCATGTGGT
GATTTTGTTTTTTTATGTGTATTCATAATATTAGTTTGATATTTAGTTGG
TTGCAATTGAGTAGATATGTTTAATGATTCAAATAAGAAGTTTACTCGTA
TACAGATTGAAGGTGCTTTTGTTCAAGGAATTGGATTCTTCATGTCTGAA
GAGTACCTTACTAATTCAGATGGACTAATGGTTGCGGATAGCACATGGAC
ATACAAGATACCGACTATTGATACAATTCCAAAGCAGCTTAATGTTGAGG
TACTTAATAGCGAACATCACAGAAACCGTGTTCTCTCATCTAAAGGTATG
GCTGCTCTCTTTATTTGGCTGATTAGGTATTAAAAATCTAATATATAAGC
ATGCAAATGGGTTCGCAATTAAAATTGATGACCTGCTATTATACTAAAAC
TGCAAGGATAGGCGAAGAGATAAGATATCTAGTAATAAAATAAAATGTTA
GTCAAAATCCACTTTACTAAAAAGGAAAAATCATTAAGAGTAACCTAACA
CCGCCTAAAATGGAAAAATCATCAAAATCTTTATTTAATAACAGTAACAG
TTCTAAACACTTCTAAACACTGACCTGGTTGATGATTGCTACCAGGGTTA
TACAACTAACGTGATCAGCACCCTAACAATTTAGTTACAATTACATCCAG
GAGCTTTTAGTATGGAAGGCAGGAAGAACTCTGAAGCCAAGAAAGAACTC
AAGCAGCAATACTTATTATTATCTAGGCTAAATGCCCTTTTAACCCTCAA
TGTTTCGGGATGTGAACTGATGCGGCCTCAATGTTTTGACTCGGCCGATT
AAACCCTCCAAGTATATGATATGTCCTGATTAGCCCTCATACCGGGATGA
AGCCAAAAAAGGGTATATAACGGAGGACAAACTTGAGAATTACTATCAAA
GATAAAGTTTGCTCGTTCCTTTAACCCCTAAAAGATAGTTTGCTTATTTA
TTTTAACCCCTAAAGAATATTAGATATGTATTTTAACCCTTTTAACCCTC
AATATTTAATGTCCTTTTAACCCTCAGGAGTGTGAAATGTCATGTTTGAC
CATCTGTTATATACTGTTTTATGGTATGAGGGCTAACCAGAACATATCAG
ATATTTGGAGGGTTGAATCGGCCGAGTTAAAACATTGAGGACGCATCAGT
ACACACCCCCAAACATTGAGGGTTAAAAAGGCATTAAGCCTATTATCTAT
ATAATGTTTTAAAAGATGTCAAGTTGCCTTCAAACAAATTGTGTTATATT
TAAGTTGTTGCAAAGCTTCTCATTTAGTCTTGTTCATTAGATCATCTGCA
AATGCATAGACTGGCACATACATCAGTACATCACCATGACCTAAAGAAGT
TTTGGCCACTTGTATATCTACTTACTGAAGTCTATGATTACATTGCAGCT
TCTGGTGAACCGCCTTTACTTTTGGCAGTTTCAGTACACTGTGCAACAAG
GGCTGCCATAAAGGAAGCTCGAAAACAACTTCATTCTTGGAAAAATTCAT
CAGACCAGTCTAACGTTTCATTCCAATTAGATGTCCCCGCTACCATGCCT
GTTGTGAAGCGACTTTGTGGAATGGATTATGTGGAGTCCTATTTGCAGAA
CTTGTTATCTTGTCAAGGAAGAAAACAGGCTTAATGTTTTTCTTTCCGCA
TGTCTGATGAGAACTGATATTATACACACTTCACTTGGAATAATATTGGG
GTGGAGCTAAAAATTTATCTTGAGAATTTTTTTCCTTTTTTCTATAAATT
TCTTTGATATATTTTATCCAA

Sequence Length:

14171

Sequence Checksum:

5786059679bd836ea8c3428e5f4c2698

View location in JBrowse:

DCARv2_Chr6:3907677..3921847-

Gene:

LOC108227368

Gene Biotype:

protein_coding

Gbkey:

Gene