Resource Type:
Gene
Organism:
Name:
LOC108199641
Identifier:
LOC108199641
Cross Reference:
| NCBI Gene |  |
|---|
Relationship:
| Relationships |
|---|
| The mRNA, XM_017367556.1, is a part of gene, LOC108199641. |
| The genetic_marker, MK009812 8_12861957, is located in gene, LOC108199641. |
| The genetic_marker, MK009810 8_12862116, is located in gene, LOC108199641. |
| The mRNA, XM_017367555.1, is a part of gene, LOC108199641. |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. |
Transcripts:
| Transcript Name | Identifier | Type | Location |
|---|---|---|---|
| XM_017367555.1 | XM_017367555.1 | mRNA | DCARv2_Chr8:12846998..12862261 |
| XM_017367556.1 | XM_017367556.1 | mRNA | DCARv2_Chr8:12846998..12862261 |
Sequence:
GCACTTATAATCACCGTTGCCAAACACGCACTATATCTGTGTATGCTGAG
TTATCCTCAGTCCAGCTCTCCCGCTAGTGTCCCAAAATGCTGCTAGCACC
CCTCCATATCCACCACCCAACTCAATTTCATCATCATCCTCGCCGGCGTT
CAATCCCCACCGTCCATCCATCCCGTTCATTTGTAGTGTTTAGAACTTTT
CAGAATTTCCGAGTGTTCAAATGTACAACCACTGATGATGCTGCTACTAG
TAGTAGTAGTAGTGAGGTGAAAAGGGCCTATCCGTTTGATGAAATAGAAG
CCAAGTGGCAGCTTTTCTGGGAGGAGAATCGTACTTTCAGAACCCCTGAT
GGGGATGACTTGGATACTTCTAAGCCCAAGTTCTATGTTCTTGATATGTT
TCCTTATCCCAGGTCAATTCTTTCATTTTTATCAATTTTCAACACTATTG
TACTATCATAACCGCCTTTTATATGCTATATTATCTGTTAGAATCTCTCT
CCCTCCCTCCCTCCCAATCTCTCTCTCTCCCCCTCCCTCCCTCTATCTCT
TTCTCTTTGAAGACGCCCCCCCCCCCCCCCCCCCCCTCTAGAATGGCTTT
CCAGTGTTGCTGTTATAACTTTTTTTTTTTTGAAAATGAAGTGTTGCTGT
TATAACTTGGAAGTCTATAAGTATCTCAAAACTGGGACTTGGTTATGCTT
GTTTCATGGCCATGAATAGTTCCTAATCTAATTACTCATATTTATTTATA
TATTGTTGAATTAATGATACATTGGGAGAGGATGGTATTGCTAGACACCA
GTCTTTTAAAATGAACTTGTAAGTTTTCTAAATAGCCCTTATAGACAGGA
GAGTTTACTCTATATTTTGTTCTTCTTTCATTTTCTTATTTTTTTTGGCT
CTTTCAACTGGCCCAAGTGGTTAGTCATAGATCATAATATTCTTATAATC
AATATGCAGTTGTTAACAGGATAAAATTTGTTCACCCGACGAGCTCTTAC
TCTTTTTCATTCCTTGGGCTTGGATTGGCTCACACTCTCTAGAAGTTGGT
GTTTCTTAGCATTCACGAGTCACATTGTCAATTTTTTTAATCTCAGTAAA
AGTGTAAATAAGTATTTTTTTTTGATTATGTTTTTTGATAATTTATTTCA
ACATAAGAATGGAGAATAACTGTGTTAGGCTTCATGGATCACTAGTGTCA
TCCGGCTACACATACTTCTCTTTTTAATTTATATGACTAATGTGACATAA
TCTGATGGTGAGTCCGATTGATCATTGGTGCAGTGGGTCTGGACTACATG
TTGGTCATCCTCTTGGATACACTGCTACAGATATTCTTGCTAGATATAAA
AGAATGCAGGGTTTCAATGTCTTACACCCTATGGGATGGGATGCATTTGG
GTTGCCTGCAGAACAATATGCAATCGAGGTTTTTTTCTCAGCTCTGACAA
ACTATGGTTAAAATTCCGACTGAACATATACTGGTCGGTGATGCAATATT
TTTTTCCTTCTTAGACAGGAACCCACCCAAAACTTACCACATTAAAGAAC
ATTGACCGCTTTCGATTACAGGTAATACCCTGTCCTTTCCTTCCTCTCCA
GACTCCAATGATCTTGTGCTTTTACATATAATCTAGTGCTTAAAACTTCA
CTGGTCATATTATATTTCGAGAAACATTTTACATAACTATTTGGCCTTTT
ATGTTCTGATTGTAGGAATTTCTTTTGGTTTACAGCTTAAATCATTAGGC
TTCTCATATGACTGGGATCGTGAAATATCCACTACTGAACCAGCGTATTA
TAAATGGACTCAGTGGATTTTCCTCCAGCTTCTAAAGAAAGGACTGGCAT
ATCAGGTCCAAAATATACTTCTCTCTCTCTCTCTCTCTCCCCCTCACACA
CACACACACACATATTTACCCAATGTCCAATATGTACCCTTATATATTAA
TACTTATATATGGTTATAAATATAAATTTAGGCTGAGGTACCAGTCAATT
GGTGCCCTGCACTTGGCACTGTCTTGGCTAATGAAGAAGTAGTGGATGGT
TTGAGTGAGCGTGGGGGTCATCCAGTAATAAGGAAGGTATGCAGACTATT
GCATTATTGTCTGTGCTAGGGTCACGGCATTTTAGTGATGAATGATTGTG
TAATTTGACAGCTTATTATTTTTTGCCAAACAGCCAATGAGACAATGGAT
GCTCAGAATTACAGCATATGCTGAACGTCTTCTTGAAGATTTAGATGATC
TTGAATGGCCTGAAAGTATAAAGGAGATGCAAAGAAATTGGATAGGGAAA
TCAGAAGGCGCAGAGGTGGAGTTCCATGTTCTTGATCCTAATGGTCTAGA
AAGTGGCAATAAAGTTACTGTCTATACCACTCGGCCTGATACGATTTTTG
GAGTAACGTATTCATTCATTTCATTGTTTCTCTCATGCCTTAACTTTTAT
AGCAATTGTTTATGTTGTAATAGGTGCTATACTCTGTGCAGATATCTTGT
TCTGGCACCTGAACACGACCTGTTGTCATCGATTGTTCCAGAGTCCCATA
GCAAAAATGTATGGTATATTCTTTTATTTGTAGCATAGTCTCAGGATTTA
TACCAAACGGCCTATTAAAAGTGTTATGATCAATAACCCAGGTAAAAGAA
TACAGAGACCTTGCCTCTCGAAAAAGTGACCTGGAGAGAACCGAGCTTCA
GAAAGAAAAAGAAGGAGTATTTACTGGTTGTTATGCAGTAAATCCATCTA
ACAAGGAAGCTATCCCGATATGGGTTGCTGACTATGTTTTGGCTAGGTGT
GTTGAGAACTATTTCTCTTTCAAACTCTATGACTTGGATATAAAATAATA
ATAATTTTGTGGCAATTATGTACATGACATGACAGTATAGGCTAAGAATC
AAATTATTACATTTTAAATTAATATCCTATTCAAGATTGTTTGGAGATTA
GACTACTTCCATGAACATGATTATTAATTGACGATTGTGTCATGTAGCTA
TGGTACAGGAGCAATAATGGCAGTTCCTGCACATGATACTCGTGATCATG
AGTTTGCCTTAAAGTATGATATTCCATTATGTTGGGTAGTAAAGCCAAAT
GAAGAAACTAGCACAGATTCTGGAAAACCATATTCAGGTCATGGTACTTG
TGTGAATTCATCAAGCTCAGATTCAGGGCTAGACATAAATGGCTTGAATA
GCAGAAATGCTGCTAGCAAAGTCATTGATTGGATAGAGAAAACTGGAAAT
GGGAACCGAAAGGTAAGCTTGGTAAATTAATATTATATCAGGCTAGTATT
TATGTTTTTTCCCTTTTATTTATTTGTTCATGTTCTTTATAATAATTGGT
TTATTATTTGATCATCAAGAAGAATTGTTTCTTGACTCCTACCATTTAAT
GAAAAAAAAGATGTTTGGATAGGTAAATTACAAGTTGAGAGATTGGCTTT
TTGCCCGACAACGTTATTGGGGAGAGCCTATCCCAGTTGTTTTACTGGAT
GACACTGGGGAGACTGTTCCCATCCCAGAAACTGAGCTTCCCCTTACCCT
TCCTGAATTGGATGATTTCACTCCTACTGGGACTGGGGAGCCCCCACTAG
CCAAAGCGCTTGCATGGGTATGTTTCTCTCTGTTCATATTTTCTATTCTT
TCAAGTTCTTCAGTTTCATGTGTAAATTGTTTCCATGCCAGGACATCACT
ATAAGCTATATATATATATATATATACTGATTATTATTTCTATTTTGTTG
ATTTTATCAAACTCACATTACTCCAGGAGGATTTAGATTATGGAAGAATG
CATTCTTTGATTGACTTATATATTTCCTCATAGCTCTAGTTCATAACCAT
TTCCATGTGGAAGTAAACTCATTAGTGATAGGATTATAATTTATTAACTC
ATTCTTATGTATGCTTTTTGATGGATATGTAGGTTAAAACCAAAGATCCC
TTGTCCGGGAAGCCTGCAAAACGTGAAACTAATACCATGCCACAGTGGGC
TGGCTCTTGCTGGTAAATTTCTTTCATGGATTTATTTCATTTATTATATA
TATAGTTTTAAGGGGTTAATAGGCAAAAAGATCACTGAACTCATGGCCAA
CTTGCAGTTGGGTCATTGAACTCAAAAAGTTTGCAAACGAATCACAGAAC
TAAATTTAAGTTGCAGTCAACTCACTGAACTAATAAAAACTTGCATTTAG
GTCACTGTGCCGTTAAGAATGAGTTGACTTTAACGGAATCCGTTAAAGAT
AATAATAAAAAATATAAAAAATTTGAAAAAAATATAAAAATTCAATTTTC
TCAAAAAATTCTGAAAACTTAAAAAAAATCTGAAAATTTTGAAGAAACTT
TAAAAAATATGGAATGTTTTTAAAAAATATGAAAAATGTAAAAACTTCGA
AAAAAATCTAAAAATTTTGAAAAAAATTCAAAAATTCAAAAAAATCTGGA
AATTCAAAAAATATACCTAAATTTCTGAAGTTAAAAAAAATTCAGACTTT
TTCCAAATTTCCAGATTTTTTCGAAGTTTTAAATTTTCAAAATCGAGTTT
TTAAAAAAGCGAATTTTTATATTTTTTCAATTTTTATTAACGGATTCCGT
TAAAATCAACTGATACTTAACGGCACAGTGACCTAAATGCAAATTTTTAT
TAGTTCAGTGAGTTGACTGCAAGTTAAATCCAGTTCTGTGATCCGTTTGC
AAACGTTTTGAGTTCAGTGACCCAATTGCAACTTGATCATGAGTTCGGTG
ATTTTTTTGCCTATTAACCCGTTTTATATATTTGTGGCTGATGTATATCT
AATCATTCACTTAAGCATATCCGTATCAATTATTTAATTATCTTTAAGAG
CAATAAGTGAAGAATGAATCTAAGATACCGTATATCGATAGTGCAGCAAT
CAGTTGGTTGTTAATTCTAGATACAAGAACAGTTGTACGTAACGTACTGT
ATAATCCAATTAAGCTCCCCTCCGGAAACTTGCACTTTCATACAAAACTT
TAACTCCCACTCTTTGGGTAAAATCTAAAATATCCATCAAGCCTACAAAA
AGAAATTATAACTATACGATCTATATATATATAAACAGAACAATGAACAT
GTGTCATGCATCTCAAAGACTTTTAAAGTTTATACCTTTATTTCCTTATA
AATTGATCCCTACAAAAGTGGTACTGAATACTTATACTTTTAAGTTGTGC
CAGTAAAACAATCCAGTTTCTGAATTTAAAATGAACCACTGGTTTATACA
TATATAGTTTAGCCTAATGTTGCATGTTAATAAATTTTTTGTAATAATAA
TAAAAACTTGTCCTTTTTATAATTCTTAAATTATGTTGCATTTGAAAGGT
TGTTTATCATACCTCATATATTGGTAATTGTTGGGAGCACAAACAGCCCT
AAAGAAATTAACCAGCTCATGACAAGTAGTTTTTTAACGTCAGATTCAAG
TCGGGAACCAGGGTTTTTATAGCTTTCGATATGAGTGTGGTTTCCAAACT
GTGAAAACAAATAATTTGGTTCAGTTCGGTTTGACCCTCCAAAACCAACC
CATGCTCATCGCCGCACTCTTGGATGGGTACTAAAAGAAGGAAGGATACT
CAGACTTTTAAATTGTTTGGCTCACAACAGATTCGACGACTCTTGATATC
TTCGCTTCCTGGATACATTCTATTGAATGGAGTCTACAACTTTCAGATAG
CTGGAGGAAATTGTTATAGATTGAGAGAAATGTTGACGATCTTCGATCAA
TTACCTACAATGGAGGAGAGTATTATAGGAGGGCAGTTCGCGGGCTTCAA
CACGGGAAAAATGTTGTGTTTTTTAGGCTAATAAAAAAAACCATGTTCGT
GAGACTAAGTAGAACCTTAATGTATCATCTATATGGGGTAAGTGCTGGAA
GCATGGCAGGGGCTATCTATAGATATGTTAAGGCTAAGCATTTTTTATTG
ATTTTGTTGTTGTTTGATCTTTACTGAAAGAAGTTTAATGTACAGAAAGT
CAACAACTGACCTACTGATAGCTCTTGACACCCTCTGACCCAATCACAAT
GAAGGATCACCTGTTGACAGTTGTCACAGTTCTTATGGAATATCGATGAG
AATTCTGACTCATTAAGTTTTAATGAGGTTGCACATAATGCATCTAATTT
ACACTCAATTTTTGCCGATGTTCTGGATGCTTGTGATGAGTATGAGAGTG
GAGCTTTATGGAGGCAATGCACTGTTTTGAAATAGAACAGTATATCTACC
ACTACTTTTGCCCCAAAATACAAGGAATAAAATAGGGGGATTGGGGCTTC
TTTATGATGGATATAATAATTTTGTTCATATGATGAGGATGAAGAACATC
GGTGCTGGTTTATCGTACTATGGAATCCCCAAGGCAAACCTCAATCCAGT
GCAGCATGAATCGAATGCAATGATGCTTGTGTGATATTTAAAATGAACAG
TAAATGTTTTAAAAAGTCACTGTACGAAGTTGGCATGATGATACAAAAGG
TGGGTGATCTTAGAGGTGTTGTGCTGCTGGATGATGATGATTTTTTAAGA
TTTGGTTTTGATATTGAGGACCGAGGATCTAAAAGAGGAGCTAGGAAACT
GATATTGAACATTATATGAAGTTGAATTTTGTAGATTGACTTTTGGCTAA
TAGAGTAGAAAGTTTTGAGTTCATAGGATCTGATGTACAAGAAAATGTGA
CTAGGTCTTTTGCCGGAAAAGGTAAAGTCTCTTCTAGGAAGAAGGTGGAT
GGAAGATTGACAAGATCCATGAATTTATCAACTTTTAGGTGAGTTATTAA
TATGTGAACTTTGTTAATAAGCCCGGTACGTACATGATGAAGAAGAGTTT
GCTGTATGGAAGCCCAATCACTTTAAAGGTTCTAATGGAATTTAAATAAG
AATATACAGCTTCAATGATTTTGCAAAGTGTAGTAGTTTGAGTAGATTAA
TAAGTTTATTTACTAATTTCAGTAGATGAGTGGAATAATTGATGCAATAA
TGCATACTTTATGAAACTGGACATTAGTATAGTTGATCCTGAAGGGTTTT
GTACAGAAAAACACAGCGGAGAATGTGAAAATATATCGAAAAACCACAGA
AACCATCTGCAGGATCCATCCGAGACATGATATTTAATTCGTGGCATAGT
GTTTTACCTTTTACGAAACTTTAACAGTCGAGAATAAGGGAGAGTAAAGA
GGTCTGGCTATGCTCGATCACCACATATCCCGCAGCATGCGATCTATGCT
CTAATTTCTTGTTCACAAGAAATTCCTGAAATTCCTAATTGTTATCTAAT
TAAGTCTCACTTGATCATCCAACAACTGAATTTCTGGTTTTCTATTTTGT
AATTTTGAGCTTCTTTTTTTTAATTAATTAGGTCACACTTGATTGATTAA
TTAATAATTCGTTTATACTCCCTCATTCTAAGGTTCACTGTTTGCACGCA
TTTTGAGGCTCCTATAAAGTATAGTTCCTTAACATTTAAAAAAAAAATGA
ATAGAAGTTAAAACGTCAAACTTTTATTCAAGGGAAAAAATTTTAAAAAA
ATATTATGGAACTAGACTTTATAGGAGCCTCCAAATGCATGCCAAAAAGT
AACATAAAGAACCTGCTGGGACAGAGGGAGTAACATTTTAAGGTTTTAGG
AGAGGTTACTTAATAAGAGGCAGCCTTGTTTATCTTTTGTAGATTAGAAG
TGGGAAATGCTCAGGTGTAGCAAGGACAAGAGGGAGAGTGTTGAACGAAG
ATTATTCCATGGATCTATATACATAATTTTTAGCATGCGTTTACTTTATT
ATGTTGCTTGGAAAGCTTGGTCACTGTCTATTGCAGCTCCTTCCAAGTGT
AGTGGAAATTGTTTTAAACAGCCTCGCAGCTAGGAGGGCACACATATAAC
CCTAAAAGCTAGTGTGTACAATATAAAATGTTGCTTAACTAATGAAGTTT
GATGGCTATACAAAATGTAAATTGTTACTCCCTTTGTCCCATTTAATTTT
ATACATTTCTTTTCAACTGCTAGACACGCATTTCAATGCTCTTATAAAAT
ATAGTTCTGTAGCTTATTTTTAAGATTATTTTTTTTGAATAAAAATTTAA
CATCCAAACTTTAATTCAGAAAAAGAAAATCTTAAAAATAAATTACACAA
CTACACTTTAGAGGGCATTAAATGCGTGCCGCGTCCCCGTGCCCCAATGT
ATACTATCCAGGGGGACGGAGGGAGTATATATTCACTTGTTTAAAGGCAC
ATGACAGATCAAACTGATTGTATATGCCAAGTCCGTATATGGAAATAATG
CAAACTATTTCGTACAGGTAGTATTTGAAATTTATCGAACTTAATATATG
GTAATAATTCAGCTGTTTTGTACAGGTACTATTTGAGATTTATGGACCCT
AATAATACTAAAGCATTGGTTGACAAGACAAAGGAAATGTGAGATTTTCT
TTGCTACACAATCTTCTACATTGTTGTTGATCCCTTTTTGGTAGCGGTAC
TGTAGTAATATTTGCAGCCAGTTCTCCATGAAAATGGTATAAAAGTATAA
AACAGCTGTAATTTTGTAAAAGTGTTTGGACCAACAGATTTTTGCCATTT
GCACCATTTAACACAGGTATTGGAGTCCAGTTGATGTGTATGTTGGTGGC
GCTGAACATGCCGTTCTTCACTTACTCTATTCTCGGTTCTGGCACAAGGT
TTGTACTTCAAAATTGACATGAAATTTTGTGGATTACAGTAGCTATAATT
ATGAGCATTGTCAATCTTGATCACTTGAAAGTCTGTAGAACTGTTTGGTA
CATCATCCTACTGAGATGTATTAGGATAGTAGCAAAGCATGACATCATCA
CTTATGTCAAGCACCCTGAAATCATGGGGTTGTCAACTTGTCGCTATTAC
TGTAGCTGGAAAGGGACCAAGTTTTAGTTTCTACATAAGAGACGGTGCCT
CCTTGTATTAGTTGGACGCAAGTGGTATACATATAGACATGTTTACCCAC
CCTCTCTTGATCTCATTTTTTGCTGATACTACCTCATATAGTCTATAAAT
GAGTTATGAGGCAGCATGAATAAGGTATGAGAGAGTTAGTTCCAGTATAT
GAGACAAAGTTCTCAAGGGAACATCTGCTTATGTCCTTATTTTCATCCAT
TAGGCCTCTCAAAGGAAATCCAATCAGTTCAAATTACACAGGTGTAGGAC
ATCTAAAATCCATTAAGCGGAAAAAATTGGGATGACAGAAGCCTATCCTG
GTGTGTAACCTATCCTAGTATCCTTCCACTGTTTTCAGGCCAAGTTCCTT
CAAGCACTTGCGGTTGTCTCTTACCGCCAATTCCATCCATGGCTTCGCCC
TTTAATTCAATTAGAGTTGATTTTTTGAGCCCGTGGCAATGAAATCAGCT
TACAGTTCCCATTAGGGTATATATCAATATACCGCGATTTTGAGATTTTG
ACCCAAGATATGAGGGCTGCATTGCTGCCGTTTTTTGTGGAAGGCGAAGT
TAAAAGTTGATACTCATGTAGACGAGTTCATCCATATTGCTCCTGTTTAG
TTCCTGTGGATAGTTGAAGGCATCATGGCTGCATATGCAAATGGCTTGCA
CGATTTTTCTCTTGTTAGATTAACTAAGTTGGCCATCAATACTAGTATAT
TGTGTGGTTGCGAGTTTGAGCCCAGTATTTCTAGAATTTCATTATTTAAT
TGGAATAAATTCTATCCTAACCAAGGTTATGCTCATGGGCTCTGGGGATC
CACTGTCCTAATCCAACATAGCTAATGGGAAGGCATGGAAAGAGATGCTG
TAGATTATGGAATGAGGACTAGTAGACATAAATTGTTGTTAAAAACACGT
AAAATGTGCAATTAAATGATTTTATACTTAAGTGCTGTCTAACTGGTGAT
TTTTATTTGTTTTGGATTCTTCATAAACTCATTGTAGTAAAATTGATGAA
CTCAAGCCATCGGTCCCCCTATCTAAATTATAAACACACGTATCTAAAAA
AATTGGGAGTTAATAATTATAACATAAAGTTGTATCCTTATGCCCTATGA
TAAATTAATAATAACCTTCTCTCTCTCTTTTTTTTTCTTTTGTGACTTTG
TCTATTTATACGTCTTTTTGAATCAGGTTCTTTATGACATTGGTGCTGTA
TCAACTAAAGAACCTTTTAAATGTGTAATAAATCAGGGGATAATCCTGGG
GGAAGTAAGTTTACTTCTCAGTAATCTCCATTACTCCATATTAGGTTTAT
CCGTTCAAGTGTTTAATGTTGTGAGTGGCAGGGNCCATATTAGGTTTATC
CGTTCAAGTGTTTAATGTTGTGAGTGGCAGGTTCAATATATGGCATGCAG
AGACTCAGATGGGAATTTAGTTTCTGCAGACTCTGTTGACGTGTTGAAAG
ACTATAGCCAAGAGAAAGTACCTGAGGATAATGTATGCTTTCTAGTTGCA
TGCTTTACGTAATCACATGCTATCTTCATATTTAACTAATGTCCTACACT
TTTCTGTCCTTTGGTCTTCTCTAACAAATAGTATATAACAATGTAGGTCA
CCAAGTCAGGGGTTCATTTTGTACTAAAAGACAATAGAAATATTCGCTTG
ATTGCCCGGGCACACAAAATGAGTAAAAGTAGAGGAAATGTTGTAAACCC
TGACGATGTTGTTGCTGAATATGGTGCTGATTCTCTCAGGTTATATGAAA
TGTTCATGGGACCATTGAGGTAGATTAATCTTGATGAACAGTACAAAATT
TCTCTCTCATGCAAATTAGCTTTATCTTCTTCTTTTGGTTATATTCACCT
TTCTTACTACCTCTTGGCTATAATGTCTGTTCTCATTATTTTCACCTGTA
GAGACTCCAAGACATGGAATACTAGTGGCATTGATGGAGTTTATCGATTT
TTAGGGAGATCCTGGAGGTTAATAGTTGGTTCAGCGTTACCTAATGGTAT
GTTTGAAGATGGGACAATAGTAACTGATGATCAACCTTCTCTGGAACAAC
TGCGACCGCTCCATAAATGTATTAATAAGGTAATGGCAATTGATAGATTT
ATAAGCTCTTGTCGTATATTACATTATTGTCTGTGTAAGAGTTTGATTTA
GCATCGTAAATAATAAAATGCAGCCTTTTATTATTATGTTTATTGTTGTT
ATGAGATGCAATGTGATGTCTATGACTTATTTAGCAAGTTGACTTGTTTC
TTATGAATATCAAGAAGACATTTGTGTGGCTTTTCAGCACTAACAGATTT
AAAGCTTCATTACATGTATAATGCATCCGCTGCTAGACATTTCGAATTTA
TTATAATTTAAAGTATTTCGACATATATGTTTAGGTGACTGAAGAAATTG
AAGGAACGCGATTCAACACGGGAATATCTGCGATGATGGAGTTCCTTAAT
GTTGCGAATAAGGTCTCTATTTATTTGTATACACACACAATCACATGTGC
ATGCATATCCCTTTCTTGATGGCCTTCTGCTGAAGTTTCTCTAGTTTATT
TTATTCATTTATTACATACAACAATTCTGTTCCATTTATCTAATAACTGT
CACAACTTACAAGTTAGTGGTGTCGTAATATTATGCATTTGCCACATTCA
CGCTTACTGTCACTATAACAGAAAAGAGAAGGCATGTAAAGGCTAAATAC
ACAAATACGCATGCATGCACTGCATCATAATTTTGCTCAATTAGCTGATC
CGATGGATTGTATAATTTTTGATGTGTTCAGATGTTAATCGAGTAACAAG
TTTCAGTTGCAGTATACAGTATGTTTATTATTCCATTAACTGTACAATTT
TCTTTTTAATAGTGGGATAAACTTCCACGATCAATTGCGGAAGATTTCGT
TTTATTACTTGCACCATATGCACCACACATATCCGAGGAGCTCTGGTGTC
GTCTCGGGCACCCAGATTCATTGGGCTATGAGCCTTTCCCTAAGGTATAG
ATCTTGTACTCCAGTGATAATCTTTTGTAACTCATCAGACTTTCAAATGT
CCCCGAACAACATAAATCCCTTCGCCAGTTTTATGAACGTACATGTTAAG
TAATATGTTCCCGTGTGATGTCGTTCAATAATCAATGTTTAATGTGCTCC
TCTAGGGTGCTTGGCTTTAAGTACAAGGGATCAAGTGGACGTATAAATTT
ATTTAGACTTGCTAGCTTATAACCCGTGCCATGGCATGGATATGTTTTAA
AAATATATGTTTATTTTAATTATTCGTATGATGTTCGGATTTTTTATATT
GATATATTTGTGGGGGTGTGTGTGTGTATAATATAAATAATATAATATGA
TATAGTATAATATAATATATTATTACTTAATTTAGTTTATGAATTATCTT
ACTAATACTTTATACACTGATTTATACATGATTAAAGTCAAGATTTTCAC
TTCAGTGAAATTTAAAAAATTTTAACGATAATTTAACAATTATATTTCAA
TTAGAACATAAAATTAAGAAGCAGAAAAGATATTTATGAATTATATAATA
AGAATTGTATTCTATTTACAAAACCTCCTTTTATTTGGTTTAGAACATGA
AAAGAATAGAAGTCGAATTAATTACAAAACCCAATTTTTTTTTATTTTTA
CAAAACCTGCTACTACTTTGTTTAGAACATAAAAAAGTAGCGTACGTGTT
CTACTTACAAAAACTACTTCTATTCAATTAGAACATCAAAAGTATAAATT
ATATTTATGCTCAAATATTACATGTAAATATTTTTTATTATTATGTGATT
TAACCGTTTGATAATAAGATCTACATTAACACTTCGTATTTATTCTGCAA
TACTATATCAAACAACCAAATTATTAATTTAGCAATTATATTTCAATTAG
AACAGAAAATATGAAGTTGAAAAATTAGTTATAAATTTTATAATAAGAAT
CGTATTCTATTTACTAAACCTCCTTTCATTTGATTCAGAACATAAAAAGA
ATACAAGTCGTATTCCAATGGCAAAACCCACTTATATTTGATTTTTACAA
AACCTCCCTTATTTTAATTAGAATATAGAAAGGGTAGGGGACATATTCAA
CTTACAAAATCTTGTTTTCTTTATTTAGAATATCGAAAGTATAAATTGTA
CTTTATATTTAAATATTATATATGAATATCTTTAATAACCATGTAATCTT
AACGGTTTATCAAGATCTAACGATTAGTATTTATTAGATAGTACTATACC
AAACAACTAAATTATCCTCCTTACACCTATTATATAGAAGGATATAACTT
AAGTGTTTGGTTGGGTGCAAGAGACCAGCCCATAACGTATATCAGGAGGC
CCAGATCCAAGAGGAAGGATGAATAAAGCCCAATCAGGGGAGGTGGAAAT
GAGGGTAGTATAGTAATTCACTAATTGAAGAAAAGTATAACAGCAGATAG
ATAAAAGAATTGAGAGAAGGGAGAGGATTTTTTAAGAAAATATCTTGTAA
TCAAAGACTAGGGGTTGTGGGAGATCGTCGCTTCTCGAATTGTGGCACTA
CCTTATATCTTGTTCTTATTACATTTTATCAGTCGAAGTTTGAATCTCTT
TGTGTGTTGGAATCCTATTGCAAAACCTAAATATGATATCTTAATTATGA
TATCGAAGTTTGATTCTCTATGCATATGAATGTAAAGCCTAAATATGAAA
TCTTAAATACAGGGGTGGTCCAGGCCCCCCCAACATTTCAGGACAGGCAC
AAATTTGTGTATTACTTATGTTGAAAGTTGAACATTGGTAGATATTATTA
GCAACTGGCCAACCCCGAATAAGGTGATAAGTATGAAAATATCAGGTATC
ATATAGGTTAAAGTTAATAATTCCTAAGTAATGACAGAACATATTAGTCA
ATTAGAGAGAATAAGGCTTAAACCTAGGTAGTTGTATCTCCTTCGTAAAG
GATTTCCCCATAATGGCCTACTTGTTATATTATACCAAGTGCCTACTTGT
TATATTATACCAAGTAATAGTATTTTGAAATTTGAACCATCTAATTCATC
CTTAAACTTGACAAGCATTCATTTTCTTTATATAAGTTAATAGTTCAGAT
TTGTAGGTTCTTATGTTTTAGAAATTTTCACGACAATACTAATAATATTC
CTGAGAAAGAAGTATAATTGTTATTTCTTTTAGAAAAACATATAGTTTCA
ATTTAAATATTGCATAAAATATTATAATATTTATCTACATGTGACCTTTT
GGTCCCCCCTTTTGTGTATAAATTCTGCGTCTGCCCCTGCTTAAATAGTT
GATCTTTGTTATGTTACCCCAGTGTACCTGTATAATGTCTGCACAGTTGT
GGAGTATTATTGTTATTGAATTTCATTTGTGTGGGGTTTGTAGAGGAGAG
CTATTATATGTACAATGTGGATTTGAGTTTATATTAATTATTATTAAAAG
AGCTATTATAAGCTCCCCTCTATAGTCTATTCTGCACCGAGAAATATAAT
TTTTTTTTTCTGAGTATGGTGTCTACGTATTTGTGGTCTAATAACAGGCG
AATCCTGCATACCTGAAGGAAGCTACAATTACGCTCCCAGTACAGATCAA
TGGGAAGACAAGAGGTACTATAGAGGTTGAAGAAGCATGTACAGAGGAGG
ATGCTTTAAAACTTGCTGCACTTAATCCAAAACTATCAAAGTATTTAGAT
GGAAAGATAATCAAAAAGATCATATACGTCCCTAGTAGAATTCTGAATGT
TATTTTAAACCGAGAAAATGTCAAAGTGGGAGTTCGGTAGTTTCCTTTCA
TTGATTATGAGCTGTGCACATGTTATATAATACCAAGCGAGGTAAGATCA
GAGATCAATTGTATTATACCGGAGAAGATCCATCACACAATTTTGTGATG
TCTTGGGTAAGAGCTTTTACCAATTTCTCTTTCTTTGTGTATCTCGTCTT
TGTGCTATTGGTCTCTTTTGTTAAACTGATTACTCAAGTGTTCTGGTTTC
TGACAGTGCAAAAGCTAACCGTGGCTGGGAAATAGGAATGGAAGGCTTGT
TTATAGATTCGGTGGACCTGCAGAGTGTTCATGTCTACACTTCATTTTTA
ACATTAATGCAGTGATACTGGTACTTTGTGGCAATTTATATCAGTTTATG
AATCAATTTCCAGAATCACATACTAAACAAGTAGTTAACATTTTTATTTT
ATTACTAATATTGTTATATATGTCCAGTAAAGTCTTAGGAAGCATTTCAG
GATTTCTGACTCATTCACCAGCACACCTCAATTGATCTCAGAATAAAATT
CATTTCATTATAA
Sequence Length:
15263
Sequence Checksum:
2c721ec84de7b7225eb4cb7d89658df7
View location in JBrowse:
Gene:
LOC108199641
Gene Biotype:
protein_coding
Gbkey:
Gene