Resource Type:
Gene
Organism:
Name:
LOC108199323
Identifier:
LOC108199323
Cross Reference:
| NCBI Gene |  |
|---|
Relationship:
| Relationships |
|---|
| The mRNA, XM_017367092.1, is a part of gene, LOC108199323. |
| The genetic_marker, MK004325 K1769, is located in gene, LOC108199323. |
| The mRNA, XM_017367093.1, is a part of gene, LOC108199323. |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. |
Transcripts:
| Transcript Name | Identifier | Type | Location |
|---|---|---|---|
| XM_017367093.1 | XM_017367093.1 | mRNA | DCARv2_Chr8:20503196..20524729 |
| XM_017367092.1 | XM_017367092.1 | mRNA | DCARv2_Chr8:20519834..20524729 |
Sequence:
AGCCCCAAAGTTACACAGGATCTATAAAATACTACGCTACGCAGAGGCGG
AGTGTGTGTTCAAAAACCTAGGGTTATTATGGATAAACCATCGGAAAAAG
ATAAATCCAGCCGGCGACACAAAGATCCCGATCGCGATAGAGATCACCAC
CACAAGCACCGCAGCTCTAAGCACAAATCTCGAGACGACGACGACAAGCA
CAGATCGAGAGGCGACCGAGAGAACGATCGCGAGCGGCGAGAGAGATCGT
ACGAGTCACGGGATGAGCGAGAGAGGAGTAGAGAGAGAGTATTGGATGTT
AATTTGAGTAAGAGGAAGGAGAGAGGAGGGAGCGAGGAGGAGAGATTCGA
TGAGAAGAGAGCTAGGGTTTCGGATGAGAGGAGAGAGAGGAAGAGGTTTG
AGGATGTGAATGGAGAGGAGAGAATCGAGAGAGACGAGAGAGAGGAGAGG
AGAGAGAGGAAGAGGATTGAGGATGGAGAGGAGAGAGGGAAGAGGAAGGA
GAGGAGGAGGTTTGGGGATAAGGTTAAGGAGGAGGATGTGGATGTTGATA
GTGAGAGTAAGCGAGGCAGTTTCGATGAGGTTTTGGTGAAGAGAGAAGTG
AAGAATGAGGAGGTGAATGGGAATCAGAATGGTGCGGGGGGTTCTGTTGC
CAATGTGAGTATTACTCACTGCATTTCTGATGAATTATTGTGTGTGTTTG
TGTTTTATGTAGTGGTAGAAATTTAATTATTTATTGAATGTGTGATAGTA
AGATTACATTATGCTGATTAGATAGCCTGCTTTTTGTGATGAGATGTGTT
CGATTAGCTTAGTGTCTTTGTCTTTTATGTCATAGTTGGAGCCTGGAGGA
TGAGTCTGTAACTGGGCTATGGGATGTTTGATTTCAGGACTGAAATGCCT
TTGGATTTGATTAGTTTATATCATAACCTAGGTGCCTGGAAGCTTGATTG
TTGTTTCGATGTTTAGCTTACTAATTAAGCCTGATTTGTGTTCATGTTTT
ATGCATTTGTCATTGTTATTCTCTAATTTTTTCTAGGTATGATCCATTTC
AATATTTTAGCCAAGAATCTATCCATGTTATATAACGATTAAAAGCATAT
CTTGTTCTGGAGATGATGTAAGTGATTTGTATTTGAGCTAAATTTGAGGT
CCTAGTTAAACCATTCATTAGTAGTCATTTTATATATGGTTTTTGTATTA
TCTATAATGCAATATCACTGTTGTGCATATATACAGCTATTACCACATGC
TATTAGATCTTTTCACTTAATGATTCATTATTCTTCTGGTTGTATACCAA
TTTTAGCAATATAACTCGCTAAAGACGAGATTGCTTCACATCTTAGGTGG
GGTTCCTTTTTTTTTAGAACTATTGGAATTGGAGCGTGCTATCATTTCTT
GTGTCAGCATATTTGTTATGGTACCAGTTGTATGACTCCACACCCTTTGT
GAGGACCTCAAAATGGGTTCATCAGGTGTCCTATGGCAATATGGCATTCA
CAGTTCACGTTATTATGTTTTCAAACATATATACCCATACATGTCTTCTT
TGCAGAAATTGTATATTGCTTTTTTGTGATCAACATTTAGTATTCAATGT
TATGCACAAAGCAGTAAAGCACATATCTGCAAGTAAACTGTCGGCTGGTC
AATGGTAGTATTTGTGGAAGACTTTTGATGAGTTTTTAACTTTTCCTTTT
AGTTGTCATGATGTTGGTGTGCTCTAAAGATATATTCTCAAGCATAATAT
TTTTTTCAAAACTCATAATTCAGTATACAGTTTTAATTGATTGATTCTAT
TTTTTACAGGGTGCTGGTTCGGAACCACTCAACATGGCATCAGGAACTCT
GCCTGGGGCCTCTTTTACTCCTGTCGACAATCCTAAGGTATCTTCAATTT
ATACCACAAATGAAAATAAGGGAGTTATTGTGAACAGATCTTATGAGGTT
CCTGGGAAATCTAGTACAGATGGGACAACTCCAGCAGCTGGGAGAAGTGG
AGGTCTCCACTCACTTGATGCTTTGACAAAAGCGAGGATAACCTTGCAGA
AGCAGAAGGAAATCTCCGAGAAGTTAAAGAAAATTCCATTGGTAAGTATA
CGATATAATATCACAAGTTTTACGCTTTCATTTTATTTCTTCAGTAGTTA
CCTGTCAATAATCTACTATGCACACCTAAAATTTCTTGTTGATCTTGTAG
TTAAACAAGAGTATTGGGTCGAAAGAGGGATCTAAAGCAGCAGTCTCTAC
ATCAGGCATACTTCCTACTCCTGCTCCATCTGCTGGAGTAACATTAAGTT
CTTCAATTCTACCTACTTCTGCTTCAGCAAAACCACTTGTGAGTGGTGTG
CCTCATCTAGAGGGCCTTACAGCACCAAAGGTTGAAGCGGTTAAACGTGC
ACAGGAGCTTGCCGCTAAAATGGGATTCAGACAGGACCCACAATATGCTC
CTCTGATAAACATGTTTCCTGGACAGTTACCACCTGATGTTACTGTCCAG
CCAAAGCCTGCAAAGGCTCCTGTTCTTCGTTTGGATGCGTTGGGCAGAGA
AATAGATGAACATGGAAATGTGGTGAATGTTCCAAAACTGAACAACCTCA
GCACCCTGAAGGTTTGTTATTTGTTTGCTTGCTGAGTTATAACATTCTAT
ATCTTTGTTTAAAGTTATCTTAATGCAAATTCACCAGTGCTTTCTTTTAT
GTTGTCCAGGTTAACATTAACAAGCAGAAAAAAGATTCATTTCAAATGTT
AAAACCTGAACTGGAAGTTGATCCCGAGAAAAATCCACACTTTGATCCGG
ACATGGGTATTGATAAGAATAAGCTTCTGAGGCCTAAAAGAATGAATTTT
CTATTTGTAGAGGAGGGTAAATGGTCGAGAGATGCAGAGATTACTAAGTT
GAAGGTATTCTGGTTTATATTTTCTATTCTCGCTCTGGTTATGTTAACAT
TTTTTTTATTCTCCACTTCTAATTTCTTTTTCAGAGTCAATTTGGTGAAG
CACAAGCGAAAGAGTTGAGGGTCAAGCAAGCACAGTTTGCAAAAGCTAAA
GCAGAGCCAGATATAAATCCCAACCTGATTGAGGTATCAGAGAGAGTGAT
CGTGAAAGAGAAACCAAAAGAACCAATTCCTGAAGTTGAGTGGTGGTAAG
ATACCTGAATCTTTCATTATACAGTATAATTCTGCTTGATTTATTTTAAG
AGAATATATTTATATTAGCTTTAAATTGTTGTCGGGTCGTTATAAATCAA
AGCAGTAAAGTCTATCTATGCTCTTTGAAACTGTGATTTACTGATTATGT
TACTTAATTGGTTCCTTCATTATATGTAGAACTCAACATGTGAAGTTTTA
TTTATCAAGCATGTGAATTAAATTCTTTTTCGTACTATTCCATATTACAT
GTGAGGTTTGGGTTGCAGATGATATTAGCTGTTTATATTGTTAAAAATGC
TAAACTCACATATAAAGCTGATTGAGAAATCAGCTTCATAATATTGGAAG
TGTAAGCTTGTTGCCAGGTCCATTTTAAAATTACATTGGTGATGCCTGCA
CGTGCCTATGTACACTTGTGAAAAGTGCCAGATCCTATATTGAAGATTTT
AAGTTCGTGTACGATAGTAGTGATGCTAAGTTTGGTGTTTTTCCTAATTA
TTCGCCCTTTGTTGATCAAATTTAGCATGTCAAATAACTAACAAGCGTAT
GCGATTGCTCATTATTTTCAGGGATGCACCTCTTTTATTGGCTGGTACTT
ACGATGATATATGTGACGGTAAAATAGCGGAAAATAAGTTGAGGATGGAG
AAAATTACCATTTATGTGGAACATCCACGGCCTATTGAGCCACCTGCTGA
ACCTGCTCCTCCACCTCCTCAACCCTTAAAACTGACGAAGAAAGAACAGA
AGAAACTCCGTACACAGAGACGACTTGCTAGGGAAAAAGATAAGCAAGAG
ATGATCAGGCAAGGCCTGATAGAACCTCCTAAACCCAAAGTTAAAATGAG
CAATCTGATGAAAGTGCTTGGTTCTGAAGCAACCCAAGATCCTACTCGAC
TTGAAATGGAAATCAGAAGCGCTGCTGCTGAGCGTGAACAAGCTCATGTC
GACAGAAATATGGCACGGAAGCTAACCCCTGATGAACGCAGTGGAAAGAA
GAAAAGGAAACTTTTTGATGACCCTAATACACTAGAGACGCTAGTTTCTG
TCTATAAAATTAATGATCTTTCACACCGTCAGACCCGCTTTAAGGTTGAT
GTGAATGCCCAGGAAAATCGATTGACAGGAAGTGCTGTGATATCTGACGG
CATTACTGTTGTGGTAGTTGAAGGTGGAAGTAAGTCCATCAAACGGTATG
GGAAGCTTATGCTTAAGCGAATAGACTGGGCTGCAGCTGTGAGAGATGAA
GACGAAGATGAGGATGAAGCTGTTGTAAACAAATGTGTCTTAGTGTGGCA
AGGAAGTGTTGCTAAACCGAGTTTTAACAGGTTTACTGTCCATGAGTGCA
GGAGTGAAGCAGCTGCTCGGAGGGTATTTTCTGATGCTGGAGTTCCTCAC
TATTGGGATCTTGCACTCAACTTCACAGAGGAGTGATTAGTCTGCTGCAG
AGTTATATTGATAGACCAAGTTTTTGCAGTTGCTTGAGCGGTATCCTTTT
TATGAGTTCATGTATGATTTAGAGCTTTAAACAGGAAAAAACTGGCTGAT
TTTATGTATCCCTGCTCCATGAAATACTTGTTTTGAGGTGGGCACTTTTA
GCCTATAATTTCTAGTTTGGTCTTTGGTCTTTGATCATTATCTTGTAAGC
TGTTGCTATAATAACAATATGGACAGTAATCCACTCTTCTTTTTATACCT
TCATTTTATGGGAAAACAATATATGCTAAGTTGTATTCCTGAAAATAAGC
CGGTTGGAGATATGTTATTAATTACTGACACTCCAAATATGTAGCATGTT
TTTTTATCTTGTTCAATTTTTTTTGAATTTGGTGCTAACATAGTTTCGAT
GCAACTTGCAGAACCTCATGTATTTTGCAAGGCTTGTTAGTGCAAAGCGT
AGATCAAATTTGAAGTTTTCTACTACTATTTGATTTCTGATTTTATTGCA
TGATGTTTCTTGAATGCTAAGTTTTGCCAATATACTATATTTGAGGGAAT
GAATGCTCATATTTAAGCAAATCAGTTGGGATTAGTTGCTGATTTATGAG
CTTGTTTGACTAGATTTAAATTAATGTCTTATGATTTATAATGATTTAAT
AGTATAAATAAGCACTTTAAATTGTACAAATAATTTTATATTATAGATAA
TTTTTAAGTTATAAAAAATATAATAAAAAAATAAATTTGATAAATTATTT
ATTTAAATGATAAAATTTATATTTATTAAATTTAATAGAAGTATAATTCT
TGATTATGAATCTTGTTTTAAATTCGATCCTGATTTTAGTGTAGTGTGAT
TAAATGCATGCTCGACTGAGAAATAAGGTTTTAAAAAAAAACATGCTATT
TCGTTGATGGACTGTATTCTCTGGTTCTAGTACATCTAAATAGTTTTCCA
TGACCTTACTCTGAAGATGATGAAGACACAAATAACAATAAATGGCAATC
CCTGGTGTGGAGATTTATAATTTTAACCAATAATATTTGGTTATGAAGGC
GTAACATCATGTAACAAACATATTCTCCGCTACTCTCTGAGTCTCTACTA
TAGTAGTAGTTCATTTTTATTTACACCCCCAAGTCGAAGCTCTCCTTTCC
ATTCTAGAATCATTTCCTTGATTTTTATCGAACAATAACCTTGACTCTTG
ACAGAATGGTTCCTAATAGAATTTTTTAAGTAAATTAGGAGAAACGTTGT
ATGGTTGGCTGGAAAAGAAAAAAGACTAGATATATATAATTTCCATCTCA
AAGAATTCTGGCAAGCAGAATGAGAGCCTCCTCTCGAACGAAGGACTTCA
GCAAACCAAGGAAGATTAATGCAGTTGTCAAGTACTTCAAAGCTCAATGT
ACGCGAAACACAACACAGACTGGCCGACCTGGATGAAAATGTTCAATTTG
GATCAACATGAATAACTTTTCTTTCTTCACTACATCACTACTAAATTACA
AACCAAGACAGCATGATCCATTCAAGTTTTTCATCTCTCATGATGCAATC
CAGTTCTTCTAACTTCTTTTCATAGTTTCGGTTAATGAAGGATCAGGGGA
TGTACACCATCGAGAAAGAGCAGGTATTTTTTACAATAAGATAGACAAGC
AACTTGACAAGGGAGATTTGCTGCTAATTTCTATTGGTCACGCAACTATA
AGAAATCCATTGATAAGGTTTAAATTTTGCATTCCACACTTTGCAACAAA
ACCTTAGTTAAGGCTTCTTCTCCAAACGGAAAATCATATCATGCCATTTT
TTTATCTAACACAAGCCATACACCATCCTTCAAACATGAACCATAAGCAG
TTACACTTAGACAGGTACACCGTAAATGTTGGAAGCAGCATTTATGTTTA
TCTCGAGAACAACAAAAGAAGAAATGCATGGAGCATCTTCAAAGAGATCG
GAAAACAAAATGTGATGATGATCAAATTACTGAATATCATATTTATAACT
ACCACAGTAGTATTAGATTAATACAAAATTAAACCTAATTTTGAAAAGGA
TTCAGATTACTTCAAATTGAATATAAAAACAACCAAACACCAGACAAGTC
TACAAAGAGGAGCCATTCCATCCAAGGTTGGATCCCTGCAAACAACAGAT
ATATAAGACTAGCAGAACATCAAGACAATAACACGTAAACTACAAATAGC
TGGATATACCGGGTACGTTTGGTTTGGTTTATTATCACAACTTGTGAAAT
GCAATTAGACCTTGGCCACCCCAATATCATTAGGTAATTTCAATTTGTCA
ATATTTAAATCTTTTTCATACTCGAAGACCTAATAATGAATAAAAGTTAC
GGCCGCAAAATATGCAAAAAAACTAAACAGAAACAACATAAAATGCAAGC
ATTACCAAAGATAGAACAATCAACTAGATAACATGAACAAATACTGCTTA
AAAATTAACCAAATGCCAATAAGACTGTATTTTAGTAACAAGAGGTTTTG
ACCGGTTGGGGGTTGGGTTAAATTTGCNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTGGTTGGGGATTGGAAGTCAATGCTGAGCTAGGGAATCCATTTACT
TTATTCATCAATCATAATTATGAACGTTAACTACATGTTATGAGTAACTG
TAGTTGACTTGCCTAATCTCTTATGATCGATCACCGAGAAATAACTCCTC
AGATCCTTAACACGTATATTGTCATTGGGATGCTATGAGATCACAATTGT
GAGGGCACTGACTAAAGGCTTAAATTCAATAAACATAGTCATGGTTATGA
CAACCAAATCATAATTTTAAAGAAAGCAAATATGAAAGAAAAACTAGTAT
ATTAAAATAAACAAAATTCATACACAACACCAACTTAAATTTAAGATCTA
CCGTTGAAGAAAAACACACCTTTGAACATGCATTTAATCATCAAGTAAGC
GATAACTACCAACAACCAAGGAACATGCTCCCTCCATCAAATTCAGCATG
ATTGTTTCAATTTGCTTAAATTCCTTTCGTTGGAAATGAATAGTAAAAAC
ATCTTTAACTTGACCAGTCGAATTGAGGTTGTTCGCCTACAATTAACATT
AGTCATCAGCATAGTTCAACAAAGACATCAAAGATATCAAAGACATTATT
ACACAGTAAATCATATACTAATTGAAAACAAACCCGTGTAGAGATCATGT
AATGCCCACCAGCTCTAAGATAGAAACGAACATTATTAACCATAAATAGC
GTCTCTGCAACATACTAGCAAACACAAAACCAAAATCACTACTATGTAAA
CCAGAATAGTAATAGAACATAACAAGTTATTGAGTAAGGTGTAATTCTCT
ACGCACGTACGAAGAATTATGAAATATCACAAATGAGCATGGTTACAAAG
ATATATTAGATATTCAACTAATAGCCATTAGCCCATTCTTTGAAACATGG
AAATCATACCGACTATCATATGAAATAAGCAAAACAAAAATTGAATGATG
AACTATACATGATTAAAAAGATATAGTATTACAAAAGTTATTTGTAATTA
GAGTAAGACCCCTGTCTCAAATTTATTTAAAAACACTTAACACGAAATTG
TGCACTTAATGGAGTACGAAATATTAAACTTCATATTACGGGGACAGAAG
AGAACCTCATCCAGATGACGATCAGTCTCAGCAAAGATCACATCAACCGT
ACTAACAAGCATGCGGTAATTCCCATGATTCCAGAATTTTTCTATAATTG
TCACAACATTGGGCCTCGTCCCGGCCATGCCTACAACATCATCAATATTC
CCCACTACATAGACCATACCATCCTGCAAATGAAAATTATGGAAATATGT
TTTCAAACTACTATTGAAACACATGTCTGGTCAAGGTATAAATGATAGAT
ATATGTAACCTACGACAGACTACATAACTTACCGAACCAACAAGATCGGA
CAGATTAGAAACCGTAAGTCCACATACATTTCCCAAGTATAAAACACGAG
AGCCGGGTTTCTAAAAAACATAAAACAAAAATAATTATTTAGATTTACAA
AAATAATTACACAACTCATATTCTATTTCAAGTTCCGAGATATGATAATA
CTTACAATCCATATGTTCGTAACACCATACATGATTGCGGCACTTAATTT
CGATCTGAGGGGATTCCACACTCTGTACTCGACTTCAGTTATGTCCCCCT
CATTCTGAGATAAAAAGATTGAAATAATTCCTAATAAGTAAAAACTTGGT
CGGCGGATGGAAACACAAAGCTATGCATTATTGTGCATTAAACAATGACA
ACACTAAAAAAGGACAAAGGACCAATATGGAGCCTTTTTAAGACATTAAT
TGAGAACTAATACATTGGGTTTAAAGAATTTAACACGTGACAAAAAAAAA
AAGCAGTTTCAACATAAAGATAATAATATTCATGGAGATTTACAAAAATA
ATTACACAACTCATATTCTATTTCAAGTTCCGAGATATGATAATACTTAC
AATCCATATGTTCGTAACACCATACATGATTGCGGCACTTAATTTCGATC
TGAGGGGATTCCACACTCTGTACTCGACTTCAGTTATGTCCCCCTCATTC
TGAGATAAAAAGATTGAAATAATTCCTAATAAGTAAAAACTTGGTCGGCG
GATGGAAACACAAAGCTATGCATTATTGTGCATTAAACAATGACAACACT
AAAAAAGGACAAAGGACCAATATGGAGCCTTTTTAAGACATTAATTGAGA
ACTAATACATTGGGTTTAAAGAATTTAACACGTGACAAAAAAAAAAAGCA
GTTTCAACATAAAGATAATAATATTCATGGAGATTCATAACTACATAAAT
CAATTAAGAGGCAAATATTAATCACAGATAAATCAACTCGCCTGAACACG
CATTAATTCTTCACCATAAAGAGCTTCGCCGGGTACTAAATTTTTGGTGC
ACAACATGTTGTCTTTACCCTTGGTTTTGAAAACACCTTCAAATCTAAAT
GGCACAACCCCAATTTGTTTTTTTAACGAAGAAAATGATGAAACCAAGAT
CGGCCTTTTGATGACTTTTTGAGTACACGTCCGGTTGTAAAGGCGCGCCA
GATTAAATTGAGCCCTTTCCAATTCACCATGCTGCATATAATCAGAATTC
AAAAGTGTTAGTATGAAAAATTATATATATATATAGGTCCTACTCCAATA
GAAACTAATAGAATAGAAACTAAATAGAAACCAATGAGATTAAGTAGAAT
GATGCGGGTTTTGGGACCGGGGATGGATCCCGAGATGGGCCTAGACGGGG
TCTAAGTGGGGCCTAATAGGGCCGGGTCGGGGCCTAGTGGCAACATGGTG
GGACCAAGTCTTGGCTATTTAAGATTGTCTACAGCATGTCTAGGGCCTGT
GAGGAGCCTTAGCGAGGCCCTAGCGGGCCCGGGGTGGATTGAGTTGGGGT
GAGGGCGGGCCTTAGGTGGGTGATGACATATAGGGGGTGGGTGAGGTCAT
TTAGGTATAGTTTCTCTTGGTTTCCATTTTAGTTTTTATTTTAGTGGTTT
GTATTTGAGCAATTGCCTACATACATATATTATTACAAATTATATTTTCA
TTAGAATAATTGCTTATTTCATAATGTTAATATTATTTATAGATTTAATT
GTGAATATATATATATATATAGATGTTATAAATGCTAGCTTGAAAAAAGA
ACAACATACCCCCAAGCCTATCAGTTGATCAATTTTCATCCGCAAGCCAC
GCATGACATCACTAATCAGTCTAGCACTTCGAACACATAGTCCTGTTTTC
CTTATAATCATTGCTCCCAGCATTGAATCACCAACTCCAACGGTATACAT
ACTTCCTCCCGTTTTTGGTTGTGGAAGAGCATCCTCGAGAAATTTCTGTA
ACTGATCAGTCACGAGTGCTAAAAAAGAAACAAAATTACAACTTTGTGTA
AAAAGAAGAGGGGATACATGGAAAGAAGTGGATTAAGACAGAAATGAACT
TTACACTTGGAAATAGCATTCATTTGAATTAGGGCATTCTCGACCGATGA
AAATGGTAGATAAGATTCAAGCTCAAAGGGCTGCTCTGATTGGTTGAGGT
ACTCCTCAACTGATTCAAATTTGTTCATCCCAACTTCAGTGATTCCACGG
GCAAGAACAAGGGCATATCCGGTGGCACATTCAAAAAGTAGATGAATCGG
CATAACTTTCTGAGAAACATAAAAGGCCAGTTAATTGTACACCACTTACA
CAAGGTCTGTCAAACCCAAACCAATTTTAAATTTTGAAATATTTAACAAA
TGCAAGGTGGGCATGAATGAAGTTTGTGAGAGTTTTTGAGAATGATTAAT
ATTGCAGGGCTAATACTGTGATTTACTATAAGTGAGAGGGAGTGAAGTGT
AATTTGAGTCTTTCTGTTACTTTTCTCTTACAAACTAAGGTGATAGTACA
GGGCCTATAAAAGGCTGCATAACAAATTTCTCTAAATGAAACATTCTCAA
GCGATCTTCTTTTTTCTATAGAGAAGAATAACAAAAAGTATAATAATCAA
ACAAAACAAATAATTGAAATCCACAAATATATCTACAAAAACATCAGCAA
GCAATTGAATTGTCGACAATATTAGTTGAAAAATAATTTACCCCTCTTCG
GATACGAGTAACTTCTCCGAGTGTTAGCTCTCTACAATCATCATCACCTT
TTCTTTTTCGCGATAGGTCGAGGATATAAGCCATTAGCCAACCAGCCAAA
CTTTAATCAGATGCTAAGGGATGGAGAAAGGGGCTTCCACTGAAATCACC
GGCTTCACTCACCTTTTAAACACAAATCAGTGTTTCCCCATTGGACGTGG
ATATAGAACCGTCCCGTAAAGAGAGCTATAGAAACTATCACGACACTCTT
TTATTCGGGACGGGAAATTGGAAAATTTTATGACCCTAAAATATTAAATT
ATTCTTTTACACAAATTATTAAAAATAATATAATTTTATATGTACTTATA
TTATTCTCTTTTATTTTTTACTATTTTATATTGTATTATGGTTTACTAAT
AATAAGTTTATGTGTGTTTTTGATTATATGATAATTAAAATTAATTCATA
GTCGAGTAATTAACTGATTAATTTTAAAATATATTTTAATTTATATTAGT
TTTAAAATTTTTAGGAATTTTCAAAATACTTGTGGATCCTTATTTGTCGT
TCGAACGATGATCAAAAAATATACTATATCAGTATTTGTGCAAATTCAAG
AATTAAGACGAAACTGAATCCATATTATTTAGATTTTAGGTTCTGAAATT
CGAAGTAGAGATTGAATTTCATAATTCTTGAACCGATAGTCGATCTTATA
TAATATTTGATTGAAAATAAAATATGATTACTATATATTTTATTTAATAT
AATAATGGGACATTTATATTTGATCAAAATTAGAGCATTTAAGATATAAT
AAATTATTTAGAAAAATTATACATATATTTAAATTTAATAAAATTGTATA
AATGATATCAAAATAATCAGTACTTTTTTTTTTTGAAAAAGAAAATAATC
AGTACTTAAATTTATATATTAACATGATTATTTTTATTTGAAAAATTGAT
TGTTCAATGCGTAGCACAGGTAAAACGTAGAAAAAGTCCTGAATATCACA
ATTTGGATTTTAGGTTTCGTGGTGCGGTTTACAATCCTTCAACCTGATTT
TTAGTTTATAATTTTATTTTCTATTCAAAATTTAANNNNNNNNNNNNNNN
NNGTTTCGTGGTGCGGTTTGTGAAAAATTCAAACCGTACCAAAAAACGTG
GTTTTTAAATTTCGTGGTGTGGTTACGGTTTGAATTTTCCACAAACCGCA
CGATGCGGTTTACAATCCTTCAACCTGATTTTTAGTTTATAATTTTATTT
TCTATTCAAAATTTAAGAGAATTATAACAAAAATAAGAATTCTATTATCA
TACAAATCTTAAATATGAATTGTGTTCGTTCTATGATTGTTCAATAAACA
CAATCTTATTCCTTTTAGGGTTCCTAAATAAGAAAATAATTGTATTACCT
TTACAATTCAATAAGAAAAGAATTGTATTATCTTTACAATCCTTTATTTT
CTATTCGAAATTTAAGAAAATCATAAGACTAAATCGAAAATAAAAATTCT
ATTATCGTACAAATCCTAAATATGACTTGTATTTGTTCTATGATTGTTCA
ATAAACACAATCCTATTCCTTTTAGGATTTCTAAATAAGAAAATAATTGT
ATTACCTCTAGAATCCAATTAAAAAAGAACTGTATTACCTTCAGAATCCC
TCAACCTGATTTTTTGAATTACATTTTTATTTTTCAATTTAAAATTCAAG
AAAATTATAAGACTAAATCGAGCAATTCCGGAGACGCCACATCACCGCCC
TTCGTATCCTCCTACTAGCTTATAGCCAGTGCAATGCACGGAACTTTTTT
AATTAATTTATAAAAATTTATTATTAAGTAAAGGACTATTGCAGTTTTTG
CTAGCCTTTCATCATAATCAAGGCAGGTTGATTCCCACTCCTCAAAGAAT
CCAATAACATCACCTGCAAGAGCTTTGAGCATATGACTTTGGCCCTTTCC
AAATTCTATGGACCTCAGCAAGATTGGAAGAATTTATAGAAAAAGTAATA
TTATAATTAAAAAAAACTATTTTATGATAGAATTGTTCTCCTATAATAAT
CAATACATGTCTTCAAAATTATTTAATAATACAAATAAAATCAGAATTAC
AATAATTATATAATCAATTATTTGTAATAAAAACCCTTTTCATAGTAGAA
TTTTGTACGATATAAAGATTCAGATGTTGGTTTCACTGTATATACAATCC
AAAGTTTATTGATCACGTCCTCTCTAATTTTCTATATTTAGGATATTTCA
TTATAGATTAGATTATTTTGCATCTTTGTATATTATTATTATTATTATTA
TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT
ATTATTATTATGACTATTATTATTATTATTATTATTATTATTATTATTAT
TATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTA
TTATTATTATTATTATTATGACCATTTAATGGATCTATTGCACTAATAAT
ATTACATTGATGAACAATAAAATGAGAAAATTAAATGAATTTGTACTTAA
TTAAAAAAATAATTAGATCAACATAACCGGTTATGTTTAAAATCGTTCCT
TTTGTTTCAGGAATTTAGCCTTTGGATCTAACATGGATCTTGCTCGTAGA
CTCCTCCAGCGTTTTGATGAATTTATAGATAACACCAATAACCGTTTCAT
TTTTTATCAACAAACAATCGAACAACTTCCGGCTGACCATCAGATTGTTC
GTGTCCAGAGTGCACAAATTAGGCATGTTTCTCCGATTGTTCATCGGGTG
CATCCAGTGGCGGATGCAGCTCCGAAAATAAGGGATGTCGTATATAATAT
TTTGTAGCGATATTAATTTGAATGAACACAGGGGAAAAATAATATTCATA
TTATATAAATATTTACCGTTTCATAACATAAATAAGTCATATCCACTCTG
ATTAGAATGACGGATACCAAAATGATTCAGACTACGTAATTTTTTACCGT
TGCACGACATTATGTAATTATATAAAACTAATTATATAAAATCAAGGACA
AAAATTTAAGAGAGGTTAACTGATCCCTCTTGCCCCTGTTGTCGAAGGGC
ATAGACTGAGAGTGAGAGTCATGAGGAATCAACATATGTCTCATGGTAAT
ATTGCTATGCGAAATGCAAGATTTTTTGGAAATGCTGTACGTCTTGTCAT
TTACCGTGTAAATGAGGATAATGAGTTGACATATATCTACCAGAGGTATA
TTGAGTGGTAGAAGACGAAAAGGAAGACGGAGAAGAAGACGAAAAGGAAG
ACGAAGAGGTGCTCACGGATGAGGGGCACGTGGTGTATTAGTATGTAGGA
CTTCCACGGATGTTGGGTTCGAATTGAGTATCTATGGTGAAAAAAGATAT
CCGTAAATTTCTAGAGTTAGTTGTAAAGTTAGTTTTAAAAGAGTTTGCTA
TCTTGTTATGTTAAGTATTAATATCAATTTTATGTTTTCTGGTACATTAT
ACTTCTCTCAAATAACTCTGTTTTTTTATAAATTTTCTAAGATTCTTTGA
AACTGAATGGAACATCTTCCAACTTATTAGGAAATTGGGTCTGCAAATAC
TTTTGCATTGTCTTTTTATAATTAAACCGACTAATAAAGACAATTGTTCA
TTGTTCTTGAATAGTGTCGAGATAGATATGTATATGTTAATACGACGAAT
TTTTCGAGATCATAATCTTCCGTCTCTAGACTGAGTTGTTATTTTTCGAG
ATCATAATCTTCCGTCCCTAGATTGAGTTGCTAGCTCTTGGTTTTAATAT
TTTGAAGCCTAAGAATTGTCCAATAAAATTCAGAAAATTGAAATTACTTC
TCTATTAGATTATATTTGCATCAACAAATTGACTTTAAAGATTTAATTGT
CTAAGAGTATTTATTACTACATTAGTACTCCCTCTATCCCATTTTATGTG
ACCCTTCCTTTTTGGGACGTCTCAAAAAGAATGAACCTACTATATTTACT
ATTTCTGAACCCATACTTTTCACTATTACACTCATCACTTATCTATTTTA
TACTCTCTTTTTATCAAATAAATACTATTACAACCACTACTTTTCTCCAA
TCTATTATTAAATTTTAGTAGGTCCCACCACTTACCCACTTTTAAACTAA
ATTTACTCTTTCTTACTACTTTTTCTTAATCTCCGTGAAAGTCAAACCAG
CTCACATAAAATGAGACGGAGGGAGTATACTGATAGCTATGCAATTGGAG
CAAATAAAAATAGTGGGATAGTATAGTTTTGATTAAGATTGTTGCAGGAA
CCAATTTTCGTTTTAGTCTGTCCATAATAGTATCTAGTGATAGCTTGTCA
ATTAGATTTTATAGTAATTCTACAATGTTGTGTGGTGATTGTTCTTTTGC
ATGACTTGTTTGGCCACTGATCAACTTTAGTTTTTCTCATTTCTAACACA
TGAAATACTTCAGATTCATGATGTAGTGGCCTACGTCTGATATATTGAAA
TATGAATGTCAGTTTTTTGTTTGCTTCTTGCTGATCGGGCCTTTTTCCTG
AAGTAAATGAGTAAGATATGTTAAATGCATATTATTATGGGATAAGCTGC
CACCATAAAGCACTCTCCAAGTCACCCTCTATATGTATATGGTATTTAAT
TTCTCCACAAGCTTCTTTTTGCATAATGTTAGAGCATCTATAATAGACTC
TTAAATAGGTTTCTAGCTCAAAATATAAAGAGAATGATCAAAAATTGAGC
TCCAAGAGGCTCTTAGTGGATCTTAAAAAACTTAAGATCCTCTTCTCTCT
CCTCTATTTTAAGAGCCTCTTTTCTCTCCTCTATTTCTCCACAAGCTTCT
TTTTGCATAATGTTAGAGCATCTACAATAGACTCTTAGATAGGCTCCTAA
CTCAAAATATAAAGAGAATGATCAAAAATTGAGCTCCCAGAGGCTCTTAT
GGATCTTAAAAAACTTAAGAGTCTCTCCTCTCTCCTCTATTTTTAAGAGC
CATGTAGTAGCTCCACTACATGAATTTAAATCCTTGACATAGTGGGTTTA
GATATGAATAAAATATACAATAATGAGAGGATATAGAGAGCATTGTTGGA
GTTATCACTCTTAAAATTATACTATATTACTAAGAGTCATATTTTTTTAT
ATTATATTTAGGAGTCTATTAGGAGACTCTTGGAGATGCTCCTAGGTATT
AGAGCAAGTCCAAGAGTGTCCTAGTGATTGCCTTATAAATATTAAAAAAA
TAGTGTCCTAGTAGTTTAGGACATAACTTTTGTACATCTATTCCAATAAG
TCTTATCTTGATGCCCTATTACTAATATATATATATATATATATATATAT
ATATATATATATATATATAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAA
GAGAGAAAAGTTCAATGGAGTACACATAATGATTGGAGTATTGGAGGACA
AAGTATCCACCATCCACTCATTTTCCATCCAAGGGCTGACATTTGTTTGA
CAGTTTTCTATTTTTAATATAAAATAAATTCATTTAAGTCATACTGTATT
TATGTTAGTATGTCTACACGTATACTGTACTCATTAACTGGCAGTTACAA
CTACCGCAAGATTCTAGCATCTCTATTCTGATAAAATGAAGTGTACATTC
AACTTTGCTTTTTCCATGTTCTTAGTTTGTGCTGCACTCCAATATCGGAG
ATTTTACAAGTTTTCGAGTCATAGCTTCTTTTTTTTTTTTTTCTTCTTCA
TTCTCCACAAACACACATGGCAATTGATCGTCATCAATCAAATTCGTTGG
ATTGCCTTTAATAATTGTATTCTGGTTGAGTTGTTTGTGTGTAAATATTT
AGAGTATAAACGTTTCTCCTTTGGAGTCGACAGATCATGTGTATTTTTCT
GTCCTGCGCGCTCAAAACTTTGTTCAAATTATATAGTTATATCGGACGAA
GCAGGGTCAGCGAAATAACTTCATGGAGGACAACAAATTCTTCAAAAATA
TGTGTTGTGGAGGGCACAATGCATAAGTCACAAAAGGGGAGAAAAACGAT
GACTGTATATTATGTCTTTTTTGACACAGCATGCATTGCAGACCCCTAGC
GTGCTCTCACCTAGCGCAGGCAACATTACTACTTCAAATCTCGTGTTCTT
AACCCTTGTGGAGTATAAGAAGAAATCTTATAGCGTCTAAGAATTTATCC
CAGGGAGTAATGAATTTAGGGTAATTAATATAGTTCAAATAGAGGTTAAT
ATAGTTAAACACCTTGTTATGCAATTGGATGAGAGAAGTATGAAACTATT
TTATTCTATAACTAATTTGTTCAAAAACAACTAGTCCGGGAGAAAAACCT
TAAGGTGTTTCATATAATTGAGCTTTACGAGTTAATAATCGATAGAGTAA
ACTGATGGTGGGACAATTTATTATTGCCTATGTAAGCTTCATTTTCGGTT
GTAGCTTCATTTTCAGATGGGAAACGATCAATTATTTACTTCAATCTAGT
AAATAATGAAGCTACAAGTTGTTTCTGGGCTAAAACGAGTCAAGAATGAA
ACTAAAAGTTCATTACAATTTCAAACAACCGAAAATGAAGCTACAAGTTG
TTTTTAACTTGAAACGAGTCTGGAATGAATCTAAACGTTGTTTCCAACTT
CAATCTACCAATATTGAAGCTACAAGTTGTTTCCGGGCTCAAACGAGTCA
AGAATGGAACTACAAATTGATTCCAATTTTAAACAACCGAAAACGAAGGC
ACAAGTTGTTTTCAACTTCAAACGAGTCTGGAATGAAGCTACAAGTTGTT
TCCAACTTCAATCTAGTCAGTAATGAAGCTACAAGTTGTTTCCGGGCTCA
AACGAGTCAAGAATGAAACTACAAGTTGATTACAATTTCAAACAACCAAA
AATGAAGCTACAAGTTGTTTTTAACTTCAAACGAGTCTGGAATGAAGATG
CAAGTTACTATATTAAGCTATCCTGAGTACCTTGGGAGCTTCATTAACAG
TTTATTAAAGATTTCTATTAAATTTATATTGGAATAGTATACCAATATAA
ATTTAATAGAAATCCCCCATTTACTACCTAATAAGCATATAATATTTAAA
CTTATAATTTAATATATATTATAACTTATAATTATAATTTGACAATGTTC
CCAAATATATATTATAAGTTATACAATTTGGTTCCCAAATATTATGTCTT
GTACTCTATTAAATCCTGATCTATGAAGAATTTTCATAGATCCTTAAATT
TAGCTTCATTATTTATATGATTAATAAATTAGTATATATAAGCTAGGGAT
TATTGACTATTCCAATGTCAAGAATGGATATCAGTTTATTAAAGATTTCT
ATTAAACTATATATAATTAAATACAAAACTGTTAATGCGCGAGGAAGGAT
GTAACATCCCACTATTTGAAACCTTTAATTACGAGGACAACATGTATACC
AATTTGTTACTACTTTTGTACCGACCTGTGGTGGGTTTTTGATCCCGTAT
TCACTTGCTTGGATGTTATATAGGAGTTCTTTTGGCTGTAAAGCTGAAAA
CAAAGTAGTCGATGTAGATTTTTTTACTAAATTCCGGACTTCTAAAATGT
TTCTTTGATAAATTTGAAGTTCTAAATTCAGTAACTCAGAATTTTTGATG
AATTTGTACTTGCAGAGTCTGATATATAGTTGAAGGCCGGAGAGAGCAAA
GAACTGACAGTGCTGCAACATTCACCCTAAAACATTACTAGTATTATTTA
CCTTCCACAAGTGAATTTATTTAGCAGTCTCATTTTAAAATGTTACCGCA
TATTCAGAATTTTGGATGTTAAGATTATTTTATCATTTGTCTCATATATT
ATGCATTAACTCTGCATGCATATCTGTCAAAAAAAAAAACATAGTCCATA
TAACTATGTCTAGGGTAATCATACCATCTAGCCTCTTTTGTAAAGTTTAA
AATATATCTAGTAAATATCAAATGGAATGAATTTTCTATTTGTAGAGGAG
GGTAAATGGTCGAGAGATGCAGAGATTACTAAGTTGAAGGTATTCTGGTT
TATATTTTCTATTCTCGCTCTGGTTATGTTAACATTTTTTTTTATTCTCC
ACTTCTAATTTCTTTTTCAGAGTCAATTTGGTGAAGCACAAGCGAAAGAG
TTGAGGGTCAAGCAAGCACAGTTTGCAAAAGCTAAAGCAGAGCCAGATAT
AAATCCCAACCTGATTGAGGTATCAGAGAGAGTGATCGTGAAAGAGAAAC
CAAAAGAACCAATTCCTGAAGTTGAGTGGTGGTAAGATACCTGAATCTTT
CATAATACAGTATAATTCTGCTTGATTTATTTTAAGAGAATATATTTTTT
ATTAGCTTTAAATTGTTGTCGGGTCTTTATGAATCATAGCAGTAAAGTCT
ATCTATGCTCTTTGAAACTGTGCTTACTGATTATGTTACTTAATTGGTTC
CTTCATTATATGTAGAACTCAACATGTGAAGTTTTTTTTATCAAGCATGT
GAATTAAATTCTTTTTCGTACCATTCCATATTACATGTGGGGTTTGGGTT
GCAGATGATATTAGCTGTTTATATTGTTAAAAATGCTAAACTCACATAAT
AAAGCTGATTGAGAAATCAGCTTCATAATATTGGGAGTGTAAGGTTGTTG
CCAGGTCCATTTTAAAATTACATTGGTGATTGCCTGCACGTGCCTATGTA
CACTTGTGAAAAGTGCCAGATCCTATATTGAAGTTTTTAAGTTCGTGTAC
GATAGTAGTGATGCAAAGTTTGGTGTTTTTTCTAATTATTTGCCCTTTGT
TGATCAAATTTAGCATGTCAAATAAGTAACAAGCGTATGCGATTGCTCAT
TATTTTCAGGGATGCACCTCTTTTATTGGCTGGTACTTACGATGATATAT
GTGACGGTAAAATAGCGGAAAATAAGTTGAGGATGGAGAAAATTACCATT
TATGTGGAACATCCACGGCCTATTGAGCCACCTGCTGAACCTGCTCCTCC
ACCTCCTCAACCCTTAAAACTGACGAAGAAAGAACAGAAGAAACTCCGTA
CACAGAGACGACTTGCTAGGGAAAAAGATAAGCAAGAGATGATCAGGCAA
GGCCTGATAGAACCTCCTAAACCCAAAGTTAAAATGAGCAATCTGATGAA
AGTGCTTGGTTCTGAAGCAACCCAAGATCCTACTCGACTTGAAATGGAAA
TCAGAAGCGCTGCTGCTGAGCGTGAACAAGCTCATGTCGACAGAAATATG
GCACGGAAGCTAACCCCTGATGAACGCAGTGGAAAGAAGAAAAGGAAACT
TTTTGATGACCCTAATACACTAGAGACGCTAGTTTCTGTCTATAAAATTA
ATGATCTTTCACACCGTCAGACCCGCTTTAAGGTTGATGTGAATGCCCAG
GAAAATCGATTGACAGGAAGTGCTGTGATATCTGACGGCATTACTGTTGT
GGTAGTTGAAGGTGGAAGTAAGTCCATCAAACGGTATGGGAAGCTTATGC
TTAAGCGAATAGACTGGGCTGCAGCTGTGAGAGATGAAGACGAAGATGAG
GATGAAGCTGTTGTAAACAAATGTGTCTTAGTGTGGCAAGGAAGTGTTGC
TAAACCGAGTTTTAACAGGTTTACTGTCCATGAGTGCAGGAGTGAAGCAG
CTGCTCGGAGGGTATTTTCTGATGCTGGAGTTCCTCACTATTGGGATCTT
GCACTCAACTTCACAGAGGAGTGATTAGTCTGCTGCAGAGTTATATTGAT
AGACCAAGTTTTTGCAGTTGCTTGAGCGGTATCCTTTTTATGAGTTCATG
TATGATTTAGAGCTTTAAACAGGAAAAAACTGGCTGATTTTATGTATCCC
TGCTCCATGAAATACTTGTTTTGAGGTGGGCACTTTTAGCCTATAATTTC
TAGTTTGGTCTTTGGTCTTTGATCATTATCTTGTAAGCTGTTGCTATAAT
AACAATATGGACAGTAATCCACTCTTCTTTTTATACCTTCATTTTATGGG
AAAACAATATATGCTAAGTTGTATTCCTGAAAA
Sequence Length:
21533
Sequence Checksum:
2e5bbd70da67f1e2eb8ded4317a635ed
View location in JBrowse:
Gene:
LOC108199323
Gene Biotype:
protein_coding
Gbkey:
Gene