Resource Type:
Gene
Organism:
Name:
LOC108199391
Identifier:
LOC108199391
Cross Reference:
| NCBI Gene |  |
|---|
Relationship:
| Relationships |
|---|
| The mRNA, XM_017367186.1, is a part of gene, LOC108199391. |
| The genetic_marker, MK008508 8_20600124, is located in gene, LOC108199391. |
| The genetic_marker, MK008912 85036.41555, is located in gene, LOC108199391. |
| The genetic_marker, MK009823 8_20609043, is located in gene, LOC108199391. |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. |
Transcripts:
| Transcript Name | Identifier | Type | Location |
|---|---|---|---|
| XM_017367186.1 | XM_017367186.1 | mRNA | DCARv2_Chr8:20596123..20609951 |
Sequence:
CCACTGCAAGGACCCAACTAAAGCTTAAAGGCCTGCTTCGTACAAAGTAG
TTATCCATATTACTTCTTCCCTTTCTTAGCCCGATCCGACCCACCCAGTT
CATCTCTCGCTCTTTTCCTCCAAAGTATTCCGGTGAAAGATCGGAGCCCC
GTTCGTCACTTCCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTGTTATATAACTGTTACGCATAGTGAAAATATGAGATTATATT
CATTGTTTTATAGCTGTGTAATTTTATTTTTCAATTCAAATATTGTTTGA
AAGCCTAACTGTATCGTCAATTGTTTCTCACTCCAAATTCAGAAGTTGTT
TACATTTTTGTATTTTTATATTTTTTCAATTGTCCAGTACTTGAAGATTT
GTAAAACATGGAATTTCATGTGATATATTATATCTGAATCTTCGTTTTTT
TGTGCCGAAGATATGTTTGGATGCTGATAGAGCTGTCTTTCGTACGGTGT
TCAGTTCTTCACTAAGCCTCCGTATAATTTGTAATTTTTTTGGCAGGGAC
ATGGAACATCCAGAAAACGAGTCTCGTTCTGGTGGTGAACAAAGCCAAGG
CAAGCCAGATGATGAGGTTAGGTTGCCGCTAGTTATTTATTTTAAAAATT
AGGGTCTCAGGGACTTGAGAAGTAATATTTACGCATCAAATTCTCCTAGT
GATGTGTTTTTCCGGCTTTTTAAATCAATGTTCGGACAGGCTATGAGTAT
TGATTGTTTAGAATTGTTTTGTCGTGTAAAACGGATTATGCCAGAAGCAT
ATTAGGAAAATGTTTTTACTTTTTGAAGGAATAATAAACTCTAATTTTTA
CAACCATATTAAATGCAGTGCCGAAACTTTTTAGTCTTATTGTGCTGCGA
AAACACGGCGATACCGACACTATATATGATGTCAACTAAATAATTAATTA
ATGATGATTGGATTCGGAGTGAGTCTTGCACGGTTGAGCTCTATATAAGT
GTGTGTATATATGTATTAGTCTGTGGGATGGGTTTTATCCAGCTACGTAA
CTATTTTTTTGGTTGCAGGAAGCTGGGGCTCGCCTCGAAGAATTTAAGAA
ATCAGTGGAGTTTAAAATGACTCTTCGTCAGAGTAACCTAAATCCTGAAA
GTCCTGGTAAGTAGTTTTAGAATGGGACTTTTCTTTGATACAAACAAAGC
TGGTTTCTATTAATTTAAAAAAAGTCATAACGTCAGTTCTATATATAATT
GTTGCAATAGAAACTAATTTATATCTAATTTATATCTAATTAGTTAGACA
TCTCAGTATGATTTCTGGAATATATAAAAACTTCTATTGTGTCTGGTTCA
ATTGAATTGAAGTGGGAATAAATGGAATAAAATCTGTACCATATTATCAG
TACATATTGTTAATATTCCTATAGATCAAAATTAGAGCTCAAACCAGCCA
ATTTGAGAAAGAGTTCCACTCTCCTCCATACTTATCTTCTTTGCAAACTC
AATTAAGGAATATTTGCACCCCCTTATAGTTCACTTTTTGTTTTTACCTC
TTTTCTTTCAACTTTAATTACATTACTAACTTTTGAGTCCATTTCTTCCT
CATTATACTTTATCTAACCAAATCGAGCATGAGAGTAACAATAATATTTA
CTTGATAGAAGTAGTTGGAAACTATGATGCTAGGACTCACCTTCAGACCT
AGCAGTACCCGTGTCGGCACGACCCTGGTATGGACAAGGAATCTGGATCA
GATCCTTCATCTGGAAATCAAACTCCTCCTCCCATCTCAGTTCACCGTTC
ACCAATTCCGGCGACTCATGATAACTCCATTGAATAGATGTCTTCAGAAG
AATATACATAAGTTGATGAAGAAAATATAACAAGCATTAAGCAGGCTATC
ATTAATTAGAACCACGGAAAGAACGGAATAAACAAAGGGGGAAGAAGATG
ATGAAGGCAATGAAGGAGAATGAGAATAGCTATGTTACCCGGATTCGGGT
ACGGGTGTGGATACGAGGGCCGGATTCTTAGTTCTAGGATAGTTAGTATT
CTTGGATGTGGATCCGAATTTAGATACACGGGTGCAGGGACCCGGCAATT
AAGCAGTTAAGCTTAGTACTAGTAAAACTTCATAAAGACTAATTTATTGC
ACATTCATAAAAATAGTGCCTGCCACAGATAAATCACATGAAACTTTTAT
TTATTTTATTTTGTAGCAAAAAATCGATAGAATAACATAGAAACAAGTCA
TTTATGGACAATACTCTTTTTAAACCAGTTGTAACAAGACCGTAATCTAT
ATTTTGAATTGGGATGCTACAAGGTGATGTGTCCGCTTCTATAAAAAAGG
ATCCGACTCAGATCCCGCACCCGCACCCATGTCATGTCCCTTGGACGTGG
TATAAGGACAAAGCGAGTTTGTGTAACATAGGAAAATAGATTGCAACTGA
TTTCTTTTTTTATGGAATAATATATAAAGTTAATCTTATTGATAATTTAA
ACTGAAATAGATTCAAAAAGCTTTTTTTTTTAATTTTACTTATATTTTTT
ATTTTTTATATTAGTACATGATAGTATTTCTAATCAGAATATCATTTAAA
AAATTGTTATCTTTGAACTAACTGAATAATTAATATTTATTTTAGAAATA
ATGTTGCCGTGTCCAAATCAAGGTGTCCCATTCTCGCTAAATGAGTCCCC
GAGTTTTTGATTTTGGAGTTTAGAGAATATGTCATTCTGACGCGTGTCTG
TGTCGTGTCGGATCCTCGCAGAAGAGTCTGAGCATCCCAGGTTGGATAGC
ACATTTATACTTGAGCTTTGGTTCCCATTAAAAATAAATGGCAAACAATT
TTGTAAAAGTAAGCGAGTGTTTAATCAAAAATTATTAAACCTATATTAAA
GTAACAACACAACATACAATAAGGACGTTAAGCACCTCGGGTCTTTAAAC
TCTCAACATATTTATATATATATATCTTATTTTTGTAAACGGCTCCTGAA
TTCTTAAAGCTCAGCAAATTGACTATCTAGATGTTTGGTCTGGTCACATA
CTTTTATCGCAATACATTGTGCCTGTGTTTCAAGAGAGAGGCTATACTAG
TGAAATAACTGGCCGAGTTACAAAGTGGGTTTGAGACTTTATGTTTAGAC
CTTCATGAATCTTCTTTTTCTTTTTTCTTTTTTTGCTGAAGACTCTATGT
TACCATTATATTATATATCATCTATGTTGCATAGTTCAATGTTTTGTTGT
ACCCATCCTCCCATCGGTCAAAGGACTCTATAAATCAGGATAAAATGTTC
ATGCCTACTTCATGATAGATCAGCCGAATTTGACATTTTTATCCATTAAT
TCTGTTTTTCTTTTCAATGTTTTCTCAGAGCCAAGTTTCCTCAGGACACT
AGATTCCAGCATTAAGCGCAACACTGCAGTTATTAAGAAACTGAAGCAGA
TTAATGAAGAACAGCGTGAAAGTTTAATGGATGAATTGCGAAGTGTCAAC
TTAAGCAAATTTGTTAGTGAAGCAGTGACCGCTATCTGTGAAGCGAAGCT
TAGAACATCAGACATCCAAGCAGCAGTCCAGGTATTTATTTTATTTGAGC
AATATTTAGCAGACACAACATCTAGTTTCATGTTACATCTTTCGAGTCTT
CAGTTGTTATTACATGGGAATGGAAAGATCTGTACCTCTATTCTGGATGT
TGTGACAAGGGACCACTATGTTGCACACTAATTGACCTTCAATAGTGCAA
TTTATGACAAACCAATGGAGTTATAGAAATAAGATCTGGCATTAAGCTTA
GGTACTTTAGCTTGACAGCCAGCCTGGATAGATCTTATATGTTTCATTCA
TTCTGCACTTGCACAAAGATATGCTGTTTGAGAATGTTGTTGATTTTTGG
CTCTCTGTTAAGAAGGTTTTTATTTTTTGGTAGAAAGTGTAACATTAAGT
TTTTCCTTACAGCACCCCTTAATATTATCAGAAATTCTAAATTACTTAAA
GATAAAAAAGTATGGTAATCATGGTAAAGTCAATTGTTCAAACCAAGGAT
TCACAGAACATAAAGTGGCAAGTTTGAGATGTTAGGGATAAGTTTGATTT
AGGCATTAGGATTGTAGAGTGTTTGATAGTGGGTTTAAATGTATATTCGG
GAATCTAGTTCAGTTAAGGCAGTATTTAATAAAATCTACCAAGGACCATT
TATATGATGTGTGCTACAATTAGGGAGAGAGGTGGAAAAGACGAGTTTCT
AGCCATTAAATATGACGATAGGAGGAATATCTTTCATGAATAATCTTCTA
TGCAATATATTTGGATATTTGCTTGGTTGTGCTCCTTTTTTCTGTTTTTC
TTATATTTCCCCCAATCCAGATCTGTTCTCTGCTCCATCAGAGGTATAAA
GATTTCTCCCCAAGTTTGGTTCAAGGGCTCCTAAAAATCTTTTTTCCTGG
AAAAACCCTGGAGGACCCAGATGCTGATAAGAATTCAAGGGCCATGAAGA
AGCGCAGCTCGCTCAAACTCCTTTTGGAACTATATTTCGTTGGTGTGGTT
GATGATTGTAGTGTTTTCGTCAATATTATTAAGGATCTTACGAGCATGGA
GCACCTAAAGGATCGTGATGCAGCTCAGACCAATTTGTCCCTTCTTTCTA
GTTTTGCTCGGCAAGCTAGATTCTTTCTTGGACTTCCGCTGTCTGGACAA
GAAATTCTTGAAGAGGTATATATGATGCTACTTTATTTTTATTGTTCTTT
TTTCACGAGTTAGACAGTCAGCAGATACCCTTACTATAGCAATTTTTTTT
TTTAAACTTAAATGTTGTATACGGATATTATGTGGTCTCCAAGTTTCGTC
TGCATAGCTTTATACTTGACCCTTGTTTGCAGACAGTACACAACATTAGT
TTTAATGGTCCAAGCTACCAATTATCTTTACAGAATGCTGACAACCTCAT
TTCATATTGTTTTTCTATCTCAGTTTTACAAAGGACTTAACATTACACCA
GAGCAGAAGAAATTTTTCAAAAAGGCTTTTCATGTATACTATGATGCAGC
GGCAGAGCTTCTTCAGTCAGAGCATACGGTAGGTTTTTTGATTCTATTCA
CCTTACATCTTCACTTTTGATGGTTTTGTTACCTTTAATGGTATTATGAA
GCCAAGGTTCTAAAGATCCTATAGTATTATGAACAGTGGTGTGTAATATT
AAGTTTGAACATTGGAAAGGTACAGTCTGACATGTGGGAGTTAAGAAATT
CTGTAGCAAGTTAGTTTTTAGTGTCTACAAGGTCAGTTCTTGTCAGTCTG
TTATATGGTCATAGTAGGCACGCTGATCCTCTCGCCTTGTGTATTTCTTA
ACTAATCTCTTTCTTGGCTTTTATTGAAGTCACTGCGCCAAATGGAGCAC
GAAAATTCAAAAATATTAAATGCAAAAGGCGAGCTAAGTGAGGAGACTGC
AACTGCATATGAAAAGCTCCGGAAGTCGTATGACCATCTATATCGTGGTG
TTTCTGCGTAAGTTGATTTGTAATTTGTAATTTTATTTTGGCATGGTTGT
TCAGATGTGGATAAGTTGAGTTTTATATAGGTGCCTAGGTGGGTGTTGGC
TTGTTTTGGAATTTTGTTCTAGTGTCTTGGTTCATGTTGTTCGACTTGTG
CTTTGTTAGAATACAATATAATCCTGCAAAGCCCTCCTCCCAAACACCTT
GAGGTTTTAGGAGAATTGGTCACTTAACATGCTTGATATCGGATTTCGTG
GGGAGGTCTTCTGCATTGTTGGTTCTTTCAATAGGGTATATTCTTGATAG
GCGGACTTCATTATAATTTCAAAACATTTTCCTGCTACTCCATTCCTTGC
TTACAGTATAAGCATGTTCATCAACATTTTCTTGGTGCCCGTGAACCATA
AAAAGCCGGGAACTTGCTTACAGCACATTGATACCTTGCTATAGTTTATA
TGTAAATTTACAATAACATGACAGAAGTTAGAAGATTTTATTTTTAAACT
AAAAAATGGTGAAGTTTTGTTACAAGTCACTTGGAAGTTGGAACAAAAAA
GGGTACAAGGAATTTATGTAATGTTGTTACATGTTTATAAATGAGATGTG
CATGGTGGCATGTTGTTCCCATATAGACCTCTATCTGAATACCTTGTGAT
CGTTTCTCATAGCTATCCTTTTTAAAGTTCAAATTTTATCGATAGGTTTG
CTTTATATGTTGTAGTTTAGCTGAAGCCCTTGACATGCAACCTCCCGTGA
TGCCAGAGGATGCCCACACAACTAGGGTCACTACAGGGGAGGATGCATCA
TCTCCTGGTCCTGGGAAAGATTCTTCTACCCTTGAAGCAATATGGGATGA
TGAAGATACAAGAGCTTTCTATGAATGCTTACCAGACCTCAGGTTTGTTT
TACGTAAAGCAATTTTTTCTACAAAAAAGTAGATAAATTTAAGTTTCAAA
AGAAGGCCAAGGAGGTGCTCTCCAAGTTCTCAGTCTATACAAGTAGACCA
ATTGAGCATAAAAATTGTAACTTCCACTAGATAATTAAGACCTCGAGAAA
ATTTAGGTAGATCAACATTGTCACTAGTATGAATATTTCGCTCAATAATT
TAAAAAGAAGCCTTGGAAATAATATGTAAATGGGGGAATTTATGTAAATT
AGCAACCTAGTATAGAAATATTAAAACCAGTCAACTTTTTCTCAAAGAAT
TATTTTTCCCATCATGTATGGGATGTGTCACCTTTTGCATCTTTTGTGTT
GATCACTTCTCCTTTAAATTTATCTGAAGCGCATCTAGTGTCATATATAT
CTGTATTAAAACTTTTGAGATTGAAGTTTATTATAGCTTAGAACATTTAG
TACAATTTTATCTTTATTGGTGAATGATACATTATATACTTGTTCCAGAG
CATTTGTTCCTGCAGTATTATTGGGAGAATCAGAGTCCAAGGTGAATGAT
CAATCTGCAAAGACACATGAGCAATCAAGTGTAAGCCTTTCCTAGTCTTT
TATTGACATCAGCAATAACTAATGGTTTTACTTACCTGTAACAATATGAA
GTCAGAAGACTTATATCTTCAGAACATTTAAAACTCCATTATGTTGTATT
GATTGTTCTTCATGTCGGTCTCGAAGTTTACACTTTTGACACATGCAACC
ACTTCCAGTGATTTTGCCATTAAAAGAAGTAAGGCGTGCATGATATATGT
ACTGTCAGACATGATTTTCTTGATCTGTTTTTGCACTTGTATTGTTTTAC
TTGTATTATTTGTATCACTTTACTATCGAGGATGAAGTATGCCACATTTT
AAATGTCATTCACTTGTTATGGTAATTGTATCATTTTTTTCTGAGAAAAA
TGATTCGCTTTTAGTTTCCTCAAAGTAATCTAAGGACTTCAGATTCTTGA
CCTTTAAAACAGATTTCCTTAATTGTGGCATGTTGCTTTGTGTAGGATTT
GACTACTGAATCGGACCAGCAGATTGTTACACAAGATATTGCAGAGGTTT
CTATAGGTTCTGAAGTTTCACAGGATTGCAAAAATGAAAAAGGAAAGGAA
AAGGATGATAGTAATGATAAAGAAAAAGCCAAAGAATTAGAGAAAGGAAA
AGAGAAGGAAGCTGATCGAAAAGGTGATGCTGAAAAAGAGAAACTTAAAA
ATCCTGAAGGAACCAATCTGGACGGTTTGTTGCAGAGGCTCCCAGGTTGT
GTTAGCCGAGACCTAATTGATCAATTGACGGTTAGTAATTACACTTGGCG
TGTAAAACATAATTGATGTATGAAATTTTCTTTTACATGGTGTTTTGGAC
TCTTTAAGTTACGTTTGTGAGTAATAATGTTGCTTAGGAGTTGGGGTAAC
ACTATTTCTTGTAACTTTACACTATGAAGGACTATTTAATCCTTAAAGTC
TTTTAAAGCAGCTTGAAATTTTAATTAGGGTATAAACAGTCCTTTGAGAG
TATTATATTAAATCACCCCTCAAAAAAGTCTCTGGATTGTTTACACGAGC
CCCTGGTCCACCACTCACTTCTAAAGAGAAATTGAAACAAAGAGCCCTAT
AATCCTATCCCATTCTCAATCCCTTGAAACATTCAAAGCCTTGATGCTCA
ATTCTTATTAGCTCTAGAAGATGTTTAGGCTGGATTTTGATGATAATTCT
CTTATATGTATATATATATATATAGGCACATTTATATTTTACTACTGTTT
AATATGCTTTTTAACATAGATTTTTCCTTTTTCTTCTTATTTATCATTAT
TATATTCAGGTGGAGTTTTGCTACGTGAATTCAAAATCTAGTCGCAAAAA
GCTCGTGAGGGCTTTATTTAGTGTCCCCAGGACATCTCTAGAGTTGCTCC
CGTATTATTCGCGCATGGTGGCTACTCTGTCGACTTGTATGAAGGATGTG
TCTTCTATGCTCATACAGTTGTTGGAAGAAGAATTTAACTTTTTGCTGAA
TAAGAAGGTATATTGCTTTGAGATGACCTTTGGTTAAGCTCTTAAAATTG
GACTTTTGTAACTTACATAAAATCAATTGCTGCAGGATCAAATGAATATA
GAAACTAAGATCCGCAATATTCGGTTTATCGGAGAACTCTGCAAATTTAA
AATTGCACCTGCGGGCCTTGTTTTTAGCTGTCTAAAGGTATTTTTAAGTT
AGTGTAGTGACTTATCACTGGATAGATAACTTGCTCTTACTGAATAGTGA
TAACGTCTCTCTCTCTCTCTCTCTCACACACACACACATAGGGTTAAAAA
TGGGGTGGGGAAAACGGGGAACCCGCCCTAACCCGCCCCGAATGGGGCAG
ATCCGCCCCGCTAATATGGGGAATGGGGCAGTGACGGGGAATGATTTTCT
GCCCCGCCAAAATATGGGGCAAGTATGGTATTTGTTGAATCCCCGTGGGG
ATTCCCCGCCCCGCCCCGCATATATTTAATATAAATAAATAATTATATTT
AATATAATATATTTATTATATTTAATATAATATATTTGTTATATTTAATA
TTATTATTTTTAATACACAAAACTATAATTTTACAATGTATAACATGTCT
CTTTGATTTCTATTATAATTAGTTTTTTGCTTTTAATATACATGTCTCGT
ATATTATTATTAAATTCTGAAGAAAAAATTACTTAATTTTAAAGTAATTA
TTTAAAGTGTAATATTATAGAAGCGGGGCGGGGCGGGGCGAAATTATATT
AAGTCCCCGGTGGGGCGGGGATGGGGATTAAAGATAAATCCCCGCGGGGA
ATGGGGCGGGGATGGGGGCAGGAAAAAATTATGTGGGGCGGGGTTGGGAA
ATGAAGTCCCCGTCCTGAACCCGCCCCATTTTTAACCCTGACACACACAC
ACACACACACACGTTCAAAAAATTACACATGACATAATGATTTATCTCTA
TGCCTATACTGGGTGGTTTTAATATATTATGTTTCAATACATTGTGATGG
GTGGTATTTTATGCTTTCTGTTATTATCTTAACCTTGTTGATTTACAGAG
TCAATTTGGAGTTGTCTGTTTATGCTTCTGTGCATTGTGAATCTAAAAGG
AAACTGCTCTTGTATTTGACTATGCAAATAGTCCTTGCTGTTTTCTTAAC
CAACATAAAGTTTGTTTAATTCCTCCATTTTCACCAGGCATGTTTGGATG
ATTTTACTCATCATAATATTGATGTTGCTTGTAATCTCCTTGAGACCTGT
GGCCGTTTTCTTTACCGTTCACCTGAAACTGCTGTACGCATGGCTAACAT
GCTGGAGATATTGATGCGCTTAAAGAATGTGAAAAATCTTGATCCTCGTC
ACAGCACTCTTGTAGAGAATGCTTATTACTTGTGCAAGCCACCAGAAAGA
TCTGCACGAGTCTCTAAAGTTCGTCCTCCATTACATCAGGTGCAGTGTTA
ATTTTGGTATATCCCATTAATTCTCAGATTCTGTATCTGCTTGGCGAAAT
TACTAACCTTCTGCTTGATGATCTGTAGTATATTAGAAAACTTCTATTCT
CGGATCTTGACAAGTCATCAATTGAACACGTGCTGAGACAACTTCGTAAA
CTACCATGGAGTGAATGTGAGCCCTATCTTTTGAAATGTTTCATGAAGGT
TCACAGGGGGAAGTATGGTCAGATACACTTGATTGCTTCACTTACTGCTG
GCTTGAGTAGATATCATGATGAATTTGCTGTTTCTGTTGTTGATGAGGTT
TGTTCTTTTCAGTATCATTGTAAATAAATGTCTGTCTGTGTGGGTATGAA
GATAGTAATGTATATCAAGTTCAGTATATAAATATTCATAAATCTATGAA
TTTCTTTACTGATTCAACAAGAGATTTCATCCATGTGTATGTTGTAGCTG
ATGAAGATCAAATATTATTCTGCTAGGTCTGAAACACTATTTTGTCCTGG
TAATATGAAGGACGCTTGGGGTTCTTATTAATTGTTATCTATTTCTATTT
GTGGTCTGAAAATTTGTTTCTGCTGCCTTGTTATACATTTTTGTTTTTGT
TTTGCTGTAACAATCCACGGCGGAGCTACATTTGGGCCATAGTGTGCCAC
CTCTCACCCTGAGTTTCTTGTCCGAACAGTAGTAGTACTAGTATGCTGCG
ATATATAAGCCAGTAGAATTAGTTAATAAAAAAATGATAGATTATTATTG
GAGACACAAATGACAAATGGGTAGACAAGCACTTAAGGTACATGCATAAA
AGAACCTGGAGGATTAGTTAGATATTATGTAATTGAAGTAAAATGTACAA
ACATAATATTATCCTTAATTTCCTATCCTTTCATATGTTTCTATGTATAA
AATTTTCTGCAGTTGTATTTTGGCACACCCTCGTTGTATATCCTTGCTCC
ACAGCTGATAACAATTTTGGTTTTGCTCATATACTAGCATACTGTAACTA
TATTTTTTTTGCAATAGCATCTTATCCTAGCATAAACTTGTTAGCAATAT
GTAATATGTATGACCATCAGAGTAAATTTGTATTTTATCCTTTACATAAC
TTGTATATGCTTTCACAGATTTTCTCTGAAATCATTATAATTCTACTTCC
ACATTTAGGTCTTGGAAGAAATTAGGGTTGGCTTGGAGTTGAATGATTAT
GGAATGCAGCAACGGCGCATTGCACACATGCGTTTCTTGGGGGAATTATA
CAACTATGAACATGTGGATTCCTCTGTCATTTTTGACACACTTTACTTGA
TTCTCGTTTTTGGCCACGGAACAGCTGAGGTATTTTAAACTTCATGGAGT
ATGTTTAGGTTTATGAATACTCATAAATCTAAATCCTTGCCATATAGTGG
CATTCTAGTGTCTAATTAGTAATTAAAGGCATGTTAAATGAAATCTGTAT
CTTAAATTTGTGCTATTATTCCTTCTACTTTTTTGTGTAGTTAATGATTA
ATTTAGTACTATTAATGAGTTTTTCTAATTTACATCACCTGAATTAACTT
TGCACAAGATAATTTTAGATCTTGTAGTAGTCATCAAAGCTGTGTATGAG
CTTTATAGCTAAGCTTTTAGTTCCAGTAAATAGAAACATAGTTAACTTAT
TTGAGCCCTAAACGCTAATATATATTTTTACTTTTCTAAATAATTCATTT
GTAGGAAGATGTATTGGATCCACCAGAAGATTGTTTCCGTATCAGGATGG
TTATAACGCTTCTTGAAACATGTGGACATTATTTTGATCGAGGTTCCTCA
AAGAGAAAGCTTGATAGATTCCTTATTCACTTTCAGAGATACATATTAAG
CAAAGGAGCAGTGCCACTGGATATTGAGTTTGACTTGCAGGTTAGATTTG
TTGATGCTCATTCCCTGTAATAGATGTGTGGCACCACTGGATTCAAGTTT
GACCTACACATTTCGACTTCTAATATATTTAATCATAATCCTTAATAGAA
ACACGAGCTTAAAGATTAAAAATTGCTTATAAAACGAAGCATTTGCAGGA
CTTATTTGCAGACTTGCGTCCCAACATGACCAGATATTCATCTGTTGAAG
AGTTAGATGCAGCTCTCGCTGTACTTGAAGAGCATGAACGTAAAAATTTA
AGTGAAAAAAATAATACTGAGAAACACTTGGACACAGAAAAAGTATCTAG
TGGACAATTGGGGCGTAGTTCAGTTAATGGACAAATGCTTTCGGATGGTG
TCAAGGCAAATGGCGAGGCACACGAAGAGGCAACAGAGGACACTGACACA
GACTCTGGAAGTGACACAATTGGTCCAGCTGGACACTATGATGAGGAAGA
GCTGGATGAAGAGAATCACGATGAGACTCATGACAGTGAAGAGGACTACT
CAGATGGGGGTGATAATGCTTCTGATGAAGATGATGAAGTCCGGGTTCGG
CAGAAGATTACGAAAGTGGATCCTTTAGAAGAAGCTGACTTCGATAGAGA
ATTCAGAGCTCTGATGCAGGTACTTTTCTAGTTTTGTTTTATGAAGCCTT
TGGAGTATCAGTTGCTAATTCCCCACTTCCTGGATTATTCGTTTAAATAA
CCGAGATGAGAAACTTGAGCAATTAGAAACTATTTTGTTTTTGAAGCTTT
ATTCATCTTAGTTTAGTTATTCCGGAGATTGAGTTCACTAATTTTCTTAT
TTTAACAAATTATATATATGGCTACGGGTCGAACTGACAATGCGAGGTGA
ATGCAGGAGAGCTTGGAGTCCCGTAAATTGGAATTGCGGGCTCGGCCAAC
TTTGAATATGATGATACCGATGAACATATTTGAAGGACCTACGAAAGATC
ATCATGGAAGAGGAGTGGAAGGTGAAAGTGGTGATGATACTTTGGATGAA
GAGGCAGGAGGAAGTAAGGAGGTTCGGGTTAAAGTTCTTGTAAAGCGTGG
CAGCAAGCAGCAAACAAAAGAGATGTTTATACCCCGAGATTCCACACTTG
TGCAAAGTACCAAACAGAAAGAAGCTGCTGAGCTTGAGGAGAAGCAAGAC
ATCAAAAGGTTGGTTCTGGAGTATAATGATAGAGAGGAGGAGGAGCTGAA
TGGATTAGGCAACCAACCAAATAGCTGGATTCAAAGTGGTGGTGGTAGAG
CTTCTAGCCGAGGCCACGCATGGGATGGGCATGGTGGGAGGGGTGCTGGA
TCACGTCATCGGTATCATCACCATTCTGGGGGTGGGATATTTTATAGCAG
AAGAAGATAAGGTTGACCAACACTTGGAAAGTAAAGAGACCAAAGAAGCT
TGGGGAAGAACATATTCCCCCCGCCCCAAAGAAACCCTTCAACATACTAA
ACCAGTACATTCAGTTTAATCCTTGTGGGATGCTTGCCGTTGTTTGCGGA
GGTATCATACAGGTCCTAAATTAACTTTTGGTTCCTTCGATGCATATTTT
TAAGTCGGTGGTTCTAGCTTATTAGTACAGGCAGGGTTGCAGAGTAATAG
ATATAGGAGTTTGCAGATTGGGATCTGTCTGCTAAAAGCTTCACAAGAGT
GAGCTGTCAGTGTTTATCTATGTATATAAGTTGTCAACAAGAAAGGAAAT
TGATCAGTGTGTAACAGTGTGTTATGTTTGTGCATGCAAATTTCAGCTTT
GTACTTGGATCTTTCAGTAGTAAATGGTACAGGATTTCCAAGAAAAAGAT
GGCCAAATTACAAGAAGTCGTCAAAATTACACCAGTACAGGACAAGGACA
TCAAATATTACATGCATTGCAATCTACTTTTTTGTTTGGATTCGTAATTT
TGTCGATGAACTAGTCTTTTCATTTTTATGGAATGTGAACAAATTGCTTC
AGAGTTCAATTTGAAGGGCGCTGAGTCATAAACTTGTGTTTTGTTTGGCT
GGGAGGAACCAAAGTTGTTATTTTTAGA
Sequence Length:
13828
Sequence Checksum:
fdbff6f96d990a2e5bc1b9e4e90e4640
View location in JBrowse:
Gene:
LOC108199391
Gene Biotype:
protein_coding
Gbkey:
Gene