DCAR_018467 | CarrotOmics

Resource Type:

Gene

Organism:

Daucus carota subspecies sativus

Name:

DCAR_018467

Identifier:

DCAR_018467.gene

Locus Tag:

DCAR_018467

Publication:

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Relationship:

There are 2 relationships.
Relationships
The mRNA, DCAR_018467, is a part of gene, DCAR_018467.
The genetic_marker, MK003088 K0532, is located in gene, DCAR_018467.

Analysis:


Name	Description
Carrot Genome Assembly DCARv2	An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below. These sequences can be viewed in JBrowse here. Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search
DCAR V1.0 Gene Prediction	For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here.

Transcripts:


Transcript Name	Identifier	Type	Location
DCAR_018467	DCAR_018467.mRNA	mRNA	DCARv2_Chr5:30331977..30340768

Sequence:

ATGGCGAGCCCTCCGAAGCCATGGAAAGCGGAATATGCGAAGTCGGGTCG
ATCTTCATGCAGAACTTGCAAAAGCCCTATTGATAAAGAGGCTTTTCGTC
TGGGCAAGATGGTCCAATCCTCCCAATTTGATGGCTTTATGCCTGTAAGC
TTCTTACACTCTTTTCTGTTGCACATTGTGATTAATTTGTTGTGGGTTTT
GCTTATTTTGTTCAATGTTGCATATTTGTGTTGTAAAACTTGATGCCTTG
ATGCTTGTATGATAGTACTAATTAAGTTTACCCTGTTCTTGTTTTTCTTG
ATTCTGGCTCATTTGCTTTGTGCATTTGTTTTTTGCAATTTTGTGGTGAG
TGATTTTTTGGGCCCTGAGTTTCTAAAGACCACTGTAGTATACTTTTCTA
TTAGCACGGCCTATAATCATATTAAGTAGATATTTTTTCAGCAAGATGTG
AAGATTATGTTAAAATATTGTAGTAGAATATTTTTTATGCAAATATATGT
TGGAAAGTATTGATTTTATAATGATTTTTTTTATAGAAGATTAACGACAT
GGATTGATCAATTATATATTTTGATAAAAAATGAATAATCCAAATTACTA
AATCATTTGAAAATCTGCATATTTATTTATTTTTACTAGATATTTACATC
TGTACGGTCGAATTTTAATTAGATGTATAAATATTGTAAATTTGAGGCGC
AGTAGTAGAAAACAATTTTTCTACTATTACCTTTAGATTCTATTTTCCCT
GTTTTTATTTGGGTTTTATATCAAGTGACCAGTTTTATCGTTAAAATATC
TCACCTCACCCGCCCACACAAGAAAAAGTGTACTAGTACTACATGTGGCT
CATGTAATAAAAATAAATTATAATTATACATGCAGAGGCATGTTAAAAAC
ACATATATGAACTTAATTAATCTATGCCTAGGTATGAAATTAATCTATTT
GAAAAAAATTCCCCAATTCTGTTAAATTTTTGACAGAGTGATATATTTAG
TGATTTAATTAATTTAAATGATTCCTCGTAGAGATCGGTTAACTCCATGA
AATATTTTGACAAAGACAGTGGCTACTTTGATATAAAACCCCATTTTTAT
TTTGGCGTGTGCGTTAAAACCCATAGTATTTTTTGGGAGTTTTGGTGTTT
TGATATTTGTGTTGGAAAAGATTGCATTTTTCTATTGTTCGCCCTTGTAA
ATACTATTCATTTTTGGTAGGAAGATGTTGAGGATCGGAGAGTGGAGGTC
TGAGTGTGCACTTTAAATTTTGCAAGTGAAATGAGATAATTTTGGGAGTA
AAATTGCACTTTACTTTTTTTGGGAGTTCTTGTTTCTCTTTCATGGGATT
TTACTGTGAGGAGGGGGCAGGAATTTGGAATTACATATTTTAATATTTCT
ATAACTCATTGTTTTCTCGCCAACCATTTATTGTTTCAGTTCTTGTTAAA
ATCCATTGCAGGCATATAATCTGCATTGGTGTCATTTGAGAAATTATGCT
TGATAGTTCTCAATCCTATCAGTGGAAATTCTACTTAAATAGTTCAGCCC
CCAGCCTCTGCATGCTCTAGTGCACACATGATTCTGTACTCTTTGTATAA
AATTACCTACAGCCCTTCCTTTATGTGTGTGCTACATAAACTCATTTATT
ATATATGGAGCATAATATTTTCGTATAAGATGTATTTGTTGCATTGGTAT
AATCAATCAATTATATACTGTGTGATTCAGATGTTACTCTCACCTTGTGC
AAACCTTAGTTTTTAAAACCAACTACAGTGATGAGTAGATGTTTCTGTCA
TCTTTTGCGACCCGGTGCACGGATTGATATCTTCATATTGATGTAAATGT
CGTGAATTATTGGAACAGATGTGGAACCATGCCAGCTGCATATTGAAGAA
AGCCAACCAGATAAAGTCGTATGTTTTTCAATTTTAATTGTTTCTGTGAT
GGAGTTTCCTTCAAGTAAAACATGTCTTCTTATTTATTGTTTGTGTTTTA
TCTGAATACACACCTTTATAAATAGCCAAGATGATGTTGATGGCCTTGAC
ATGCTTCGATGGGAAGATCAGGAAAAGATTAGGAAATATGCTGACGGTAG
TGAGGCCCCAAAGTCTGGTGGTAGTCGTTCTTCAAGAGCTGCTGCTTCTG
CAGCTACAGCCTCTGGGATTGAAGTTTCGCAGAGCAGCCGTGCTACTTGC
AGACAATGCAACCAAAAGATCATGAAAGGGGATGTAAGTTAGAAACCTCT
TTCTAGCAATTAATTATTAGACTTACTGTTACTAATAGTTGGCAGCTGAT
TGTCTCTTTCTTGCTATGGATTATATTTTTTTCCTTTTCCATGGCACATA
TCAATATATCATAGACTTAGATTACTAAAAAATGAATATCAATATCTAAT
TAGCTATAGCTATAGATATTACTAAAGTGTTTCTCCACTTTTTGAACTAA
TTTTCTGCTCATTTAGTGCACATCCATCTGGGGATTAGTTTGTTGTCCTT
CATTATTCTATCTGTATTCTGTACTATATTAATATCTGTACTTCTGTAAA
TGGTCTGTGACTGTAGTATGAAGTGTTTATGCTGTGGCATGTTTCAGTCT
TATTACCACTTGGATACTATGTATGGTCGTATCACGTATGATTTCTATGT
TCCCGTAATGGTCCTTTAACAATAATTACACTTTCTATTATCAGGAGAAA
AACCTGTTCATCTACTCTTGGGACTATATATATATATAGCTTTGATATAC
TCTCTCCGTTTCAATTTACATGTCCACTTTTAAGAATAAAATTTGTTTCA
ATTTAGTTTGTCCACTCTAGCTTTCAATGTAAAATTATATTCCCAAAGTA
CTTCACATATATGTTATTTATATTTCCTAGATCCACCTCATTCCACATAT
TACAATCATTTAATGCGATTTATTTATAAACATTCACTTTTCTTAAACTG
TGTGATTTTTTAAAAGTGGACATCTAATTTGAAACGGGGGGAGTATTAAA
TATTACTTTGTTTCATGCTTAATTTTGTCATATGTTTGAAATATGTTTAC
TTAATTTGAAGGGTTTGTCTAGTGTGTGCCCCTGGGCACATGCTAAGCAC
CAAAGTTTATGAATTTGGATGCTTTTGATTGATGTGGTTGTTGTAAATGC
AGGGGGGTCCACCATTATTAAAGAGTGTAACCAATCAAAACAAGAGAAAT
CCTTTTATGCTTATTGTGTGCCCATGGGCACACCATAGAAAAACTATAAT
TTGAAATCTCTTGTAACCAAGAGAAATCCCTCAAATTTTATGCTTACAGT
TCGATTTTTATAATGCATTGTTCAGGTACGTATATCCGCTAAACCTGAGG
GTCAAGGTGCTAAAGGTGTGACCTGGCACCATGCTAACTGTTACATGGAA
TCATCTCCTACCATTGAAGTAAATAAATTATCTGGATGGGATGATCTTTC
TGCATCTGATCAGACTGCTGTCATTGCGATGATTGAAAAGTCAACTAGCA
AAGGTGTTTGAAGTGGGCTTGCTTAAACATAAACATAACTGTGTGTGATG
TGTGTGTGTGTTTGATGCTTTTACTGATCACTAGCATTTACTTTTTCAGG
TCCAATAAATGATCCAGTAGATGATACAAAGCCTATGCAACAATCTACCT
CTAAAGGTAATGCTAAGCGCAAAAGTGCATCAACCAGTGAACAGAAATTA
AAAGTTGCTAAGGCTGAAGGTGATGTACTGCCAAATACACCTAAAAAGAA
TGCTGATGCCTTGGGAATCGACAGCCCACGAGCATCTACCGTGGACAGAG
AACTAGAAACCCAGTCAAAAGAATTATGGTCTTTGAAAGACGATCTCCGG
AAGCATGTCACAACTTCAGAGTTGCGGGAGATGCTTGAAGTCAACGAACA
AAATTCAAAAGGATCAGAGCTTGACTTGCGTGATCGCTGGTAAGTTCTTT
TAGCACATAGCTATGAGCTCTAACTTCTAATCTACCCTATCTTCCTATTA
TAGTTGGCCCCTTTCTCGGTTCAGTTTGGTTTTATTTAATGCTACACCAA
GACACATTCTTATACTATTTTTGTTTACATGTATAGTGAGCCGCTGAAAG
ACACTACCTTATTAATAGAAGTAATACTTTATTAAATAATGAATGGAGTG
TTTTCTCTCTTTTTTTTGGTTTGACACTTGTATGTTTTTCAGTGCTGATG
GCATGCTCTTTGGAAAACTCGAGAATTGCCCTCTATGTTCTGGGTATCTT
TATTATTCCGGAGGGATGTACAAATGCAGTGGGTTCCTGTCAGCCTGGAG
CAAGTGTTCGTACTCCACAACTGAATCTGTACGTGTACAAGGGAAGTGGA
AGATCCCAGAAGGGTCAGAAAATGAATATCTTGTCAAGGTATATATTTTG
GCTGAATTCTGAAATATTAGATAACAAGAGGGTAGTGACACATCTTGGAA
GAACATATTGTATAATACTTTTGTTATTTTCCCTTGGAAGAACATATTGT
ATAATACTTCTGTTATTTTCCCTCTCCCATCTCTTTTTAGTGGTTCAAGT
CACAAAAGGTAAAAAAACCTGTAAGAGTACTTCCTCCACCAACACCTAGT
AAACCCTCTGGAACTCCGTCAACAAAAGATGGAAGGTTGGAGGATCTAAA
AGTTGCTTTTAATGGATTATCTGGGCCGGCTATGGTAAGTGTCATATATA
GTTTGCCGTCTACCTCTTGAACTCTGTTTAAGCACTCAATATTCCTGTAT
AATGTAATTTTCGTGGATATTAATATTGAACATGCTACTGAGCAGGAGGA
ATGGAGGAGCAAGCTTGGAGAGGTAGGTGTACAGATTCATGAAAAAGTTA
AGAAAGGTATGTAACTTCTACTTCACGTAGCGGATATCTATTGATGAATA
CTGAAGTCTTAACTGATATATATATTTTGTTACCTAACTGACAATGTATA
TTGCAGAGACAAACTGCTTGGTTGTAAGTGAAATGGTGAATGGTCAAAAT
GCTGAAGTAAAGAAGGCAAGGTAATACTGCCTTATTGATGGCACACAATT
TTTTTATGTTCATTCTATGAAGTTTTTAATTCATTGTAAAAGTGCTTCCT
CTTGGCAGGAGGATGAAGTTACCTATAGTTAGGGAGAACTATCTTGTTGA
TTGCCTAAAAAGACAGAAGAAGCTTCCGTTTGACTTGTATAAAATTGAAG
CTTTAGGAGAGACCAGTGGCAGTGATGTGGTGACGGTCAAAGTGAAAGGA
AGGGGTGCTGTGCACGAAGCATCTGGCCTACAGGATACTGGACACATACT
TGAAGTTGGGAAGAGTATCTATAATACTACTCTAAACCTGTCTGATTTGT
CTACTGGCGTCAACAGGTTTGTGTAAATTTAAATGCCTCTGTTGCAGTGT
ACCTTTTTTCTTCTTTGTCCTTTTTATACTAGTCAAATGAGATACCTATC
TACAGTTAATCGTTACAGATGTAAGCTCAGCATAGATCGTATGGTATTTA
TACTTGTAAAACATCAGCCATATTGTTCTTCAAACTTATTTTATTAATCT
ATTGTTGTAGTTATGTAAATTCTGGAAGTAACTTTAACTTAAGTTTCTGT
GTTACCTTGACGTTTCTGCAGTGGAGATCTCTAATAGAAAAATGTCTATG
CTGATTCTTAAAAGTTATTCTTATGTTTACAAATGACACAAGGCGAATAA
GTATTGAATGACAAATTATTGTTTTCTTTCCTTTAGAAGAGGTATGTCAG
CATGTTCTGCAGCCCATGCGTCGGTCTCATATATTGGAACTGTCATTTAT
AACTTATTGCTTCTGGTTCTGCGGTCAACTAGTTTCTGTTTTTCATTTGT
GGTGTCTTGCAACCCCTCACATTTATAAAACTAAGTCTCTGAAAGAGTGG
GCATGTAAGTCTTCTAGAGTGATTAAATTTTTTCCAAAAATTTGAAATTG
TTTTATAAGTAAGAGGTGTCATGATTAATTTAATTAACTTCGATTATACA
ATTTCTTATGCTTGTCTCGATCATTGACTATGTTTTTTTCTGTATGAAGC
TATTATATCCTTCAGATTATTGAAGAGGACAAAGGGTCAAATTGTTATGT
GTTCCGTAAATGGGGACGTGTTGGAAATGAAAAAATTGGAGGAAATAAAT
TAGACGAGAGGGACAAAGAAGATGCAATTGAAGAATTTGAGCGACTATTT
CTTGAGAAAACTGGTAACACATGGCGTGCATGGGAAAGGAAAGTAGATTT
TCAGAAGAGACCTGGCAAATTCTTTCCGCTAGAGATTGTAAGATTTAAAA
CAGTAACTAAATTTTATAGTAAGTGCTTAAAATGTCTTTTCTGATAGTTA
TTTAATTTTGCAGGATTATGGGGTTAATAAAGAGATGGTTCAGAGAAAAA
ACTTTAAGGATTCTGATAGCAAACTTGCAAGGCCATTACTAGAACTGATG
AAGATGCTTTTTAATGTGGAAACATACAGGTTCATAAAATTTTACCCATT
TCCCATTTAAGTTAATGATTTGCCTCATAGGATGTTTTGAATTAAAACAT
AAATTTCCAGAGCTGCAATGATGGAGTTTGAGATCAATATGTCTGAAATG
CCTCTTGGGAAACTTAGCAAAAGGAACATCCAACAAGGTATACTACTATA
GTACTATACATAAATTATTTGTGTAGATTTTAAGCATATATGTTAAATTA
TTTGTGTAGATTATAAGCATATATGTTAAATTATTTGTGTAGATTTTAAG
CATATATGTTAATGGTTTAAACTTTAACGATTAAAATCAGTACTTGAACA
ATCTGAAAACTTGCATTAACAGGTTTTGAAGCCCTAACTGAGATTCAGAA
TTTACTGAGCAGTAGTGCATACAATCCTACTGTCAGAGATTCTATGATTG
TCGATGCCAGCAACCGTTTCTTCACTATGATTCCTTCAGTTCACCCACAT
GTGATTAGGGATGAGGATGACTTTAAATCAAAGGTATATGGGTGTTGTAC
TGCATAATTTCAAGTTACATCGTTCATGTTCTGTTCAATTTAAAACAAAT
GTTATTCTTCACCTGGTCTACTATATCTCTAGTATGTAGCATGCTGCCTA
TTGCTGCTTAATGTTTCCTGTCTTGTAATTGTTACAAGTTGCAGTTCATT
AATCTATTTTCAATAGGTCATAAATTTCCTGTCTTGTAATTGTTACAAAA
GAAGTTGTTCATTAATCTGTGTTGAATAGGTCAAAATGCTTGAAGCACTT
CAAGATATTGAAATTGCCTCCAGGCTAGTAGGCTTTGACACCGATGATAG
TGTTTCTGTTGATGAAAAATATAAGATGCTTCACTGTGAAATGAACCCTC
TTCCTCACAACAGTGAGGATTATCGGTTGGTTGAGAAATATCTCCAAACT
ACGCATGCTCCAACTCATTCGGTGAGCATGCTTTAATTAGTTGTGGTTAT
TATCGTTTTTTTTTTTTTTACTTCTTTTATGGCGTCTTATTATGAAATTG
TAATACTATCAGGACTGGTCACTCGAACTGGAAGAGGTTTTCTCTCTTGA
AAGGGAAGGTGAATTTGACAAGTTTGCTCCTTACAGAGATAAACTAAAGA
ACAAGATGCTCCTTTGGCATGGTAAATTAATTACTTGTGATCACAGTTGG
CTGATGAATATTTAGGTCTCTTTACATTTTATGAAAAAATGTTAACTTTC
TAATGTTATGTTGTAGGTTCTCGGTTGACGAATTTTGTGGGTATACTTAG
CCAAGGATTGAGAATAGCCCCTCCTGAAGCTCCAGCAACTGGCTATATGG
TTATCTGTCCCTTCTTTCTTTTTCTTTTTTAAATTTTGTACAAGATAATT
TGTTTTAAAGTTGTCTGCTTATTTTAATGTTGAAAATATTCTTTCTGATA
TTAGTTTGGCAAGGGCGTCTATTTCGCTGACTTGGTCAGTAAAAGTGCTC
AGTACTGTTATACTGACAAAAAAAACCCTGTGGGATTGATGATTCTTAGT
GAAGTTGCCTTGGGTGAAGTGTATGAGCTAAAGGGTGCCAAGGTAGGTTT
CTTTCTGCATAAAGGTCATTTTATCTCTAGCAATTCTATTAGTCGTTGGT
AGAAGGCATGCATCTGGAATCTGATATTTGAAAGTCGCAATTTACATGTC
CCATATTCTAACAAGCATGCGTATTTCTCATTTTATTTTAGTTGTGGTTA
AATTTAATGGTTTTAACACAATTGTTTTTATTAATAATCAGTACATGGAC
AAGCCTCCAAGAGGTAAGCACTCCACTAAAGGCCTTGGCAGACAAGTACC
CCAGGAGTCAGAATATGTTAAATGGAGAGATGACGTCATTGTTCCTTGCG
GAAAGCCAGTTCCATCAAATGTGAAGGCAACAGAGCTGAACTACAATGAG
TACATCGTCTATAATACAGCTCAAGTAAGTTATTCATGTATTGTGTTGCT
AGTACTATTACCTAGTTTTGAACTGAAGTTCTAAACATTACTCTAAATCT
AATACTGTTAATCGATGAACAATCGTCTTATTTGGATTGTTGAAGTATCT
ACCATCAATCACCAGCCTCCTTTTAGTTGGATTAATTATTGCAACAAAAA
AAATTAATCATAATAATATTATGAGAACAATGTCAGATTTGCTTGAAGAC
CAGTTCTGCTGTTTATTGCATTCTCTGCCATGTTTTGTACTATTGTATGA
ATGTTTTGGAGGAGTAAATGTTCATCTCTGTATCTTGGAACAGGTTAAGA
TGCAATTCTTACTGAAGGTGAGGTTCCATCATAAACGGTGA

Sequence Length:

8791

Sequence Checksum:

04eadd27b0e38806a1079f46f6333a0a

View location in JBrowse:

DCARv2_Chr5:30331978..30340768+

Cds:

>DCAR_018467cds ATGGCGAGCCCTCCGAAGCCATGGAAAGCGGAATATGCGAAGTCGGGTCG ATCTTCATGCAGAACTTGCAAAAGCCCTATTGATAAAGAGGCTTTTCGTC TGGGCAAGATGGTCCAATCCTCCCAATTTGATGGCTTTATGCCTATGTGG AACCATGCCAGCTGCATATTGAAGAAAGCCAACCAGATAAAGTCCCAAGA TGATGTTGATGGCCTTGACATGCTTCGATGGGAAGATCAGGAAAAGATTA GGAAATATGCTGACGGTAGTGAGGCCCCAAAGTCTGGTGGTAGTCGTTCT TCAAGAGCTGCTGCTTCTGCAGCTACAGCCTCTGGGATTGAAGTTTCGCA GAGCAGCCGTGCTACTTGCAGACAATGCAACCAAAAGATCATGAAAGGGG ATGTACGTATATCCGCTAAACCTGAGGGTCAAGGTGCTAAAGGTGTGACC TGGCACCATGCTAACTGTTACATGGAATCATCTCCTACCATTGAAGTAAA TAAATTATCTGGATGGGATGATCTTTCTGCATCTGATCAGACTGCTGTCA TTGCGATGATTGAAAAGTCAACTAGCAAAGGTCCAATAAATGATCCAGTA GATGATACAAAGCCTATGCAACAATCTACCTCTAAAGGTAATGCTAAGCG CAAAAGTGCATCAACCAGTGAACAGAAATTAAAAGTTGCTAAGGCTGAAG GTGATGTACTGCCAAATACACCTAAAAAGAATGCTGATGCCTTGGGAATC GACAGCCCACGAGCATCTACCGTGGACAGAGAACTAGAAACCCAGTCAAA AGAATTATGGTCTTTGAAAGACGATCTCCGGAAGCATGTCACAACTTCAG AGTTGCGGGAGATGCTTGAAGTCAACGAACAAAATTCAAAAGGATCAGAG CTTGACTTGCGTGATCGCTGTGCTGATGGCATGCTCTTTGGAAAACTCGA GAATTGCCCTCTATGTTCTGGGTATCTTTATTATTCCGGAGGGATGTACA AATGCAGTGGGTTCCTGTCAGCCTGGAGCAAGTGTTCGTACTCCACAACT GAATCTGTACGTGTACAAGGGAAGTGGAAGATCCCAGAAGGGTCAGAAAA TGAATATCTTGTCAAGTGGTTCAAGTCACAAAAGGTAAAAAAACCTGTAA GAGTACTTCCTCCACCAACACCTAGTAAACCCTCTGGAACTCCGTCAACA AAAGATGGAAGGTTGGAGGATCTAAAAGTTGCTTTTAATGGATTATCTGG GCCGGCTATGGAGGAATGGAGGAGCAAGCTTGGAGAGGTAGGTGTACAGA TTCATGAAAAAGTTAAGAAAGAGACAAACTGCTTGGTTGTAAGTGAAATG GTGAATGGTCAAAATGCTGAAGTAAAGAAGGCAAGGAGGATGAAGTTACC TATAGTTAGGGAGAACTATCTTGTTGATTGCCTAAAAAGACAGAAGAAGC TTCCGTTTGACTTGTATAAAATTGAAGCTTTAGGAGAGACCAGTGGCAGT GATGTGGTGACGGTCAAAGTGAAAGGAAGGGGTGCTGTGCACGAAGCATC TGGCCTACAGGATACTGGACACATACTTGAAGTTGGGAAGAGTATCTATA ATACTACTCTAAACCTGTCTGATTTGTCTACTGGCGTCAACAGCTATTAT ATCCTTCAGATTATTGAAGAGGACAAAGGGTCAAATTGTTATGTGTTCCG TAAATGGGGACGTGTTGGAAATGAAAAAATTGGAGGAAATAAATTAGACG AGAGGGACAAAGAAGATGCAATTGAAGAATTTGAGCGACTATTTCTTGAG AAAACTGGTAACACATGGCGTGCATGGGAAAGGAAAGTAGATTTTCAGAA GAGACCTGGCAAATTCTTTCCGCTAGAGATTGATTATGGGGTTAATAAAG AGATGGTTCAGAGAAAAAACTTTAAGGATTCTGATAGCAAACTTGCAAGG CCATTACTAGAACTGATGAAGATGCTTTTTAATGTGGAAACATACAGAGC TGCAATGATGGAGTTTGAGATCAATATGTCTGAAATGCCTCTTGGGAAAC TTAGCAAAAGGAACATCCAACAAGGTTTTGAAGCCCTAACTGAGATTCAG AATTTACTGAGCAGTAGTGCATACAATCCTACTGTCAGAGATTCTATGAT TGTCGATGCCAGCAACCGTTTCTTCACTATGATTCCTTCAGTTCACCCAC ATGTGATTAGGGATGAGGATGACTTTAAATCAAAGGTCAAAATGCTTGAA GCACTTCAAGATATTGAAATTGCCTCCAGGCTAGTAGGCTTTGACACCGA TGATAGTGTTTCTGTTGATGAAAAATATAAGATGCTTCACTGTGAAATGA ACCCTCTTCCTCACAACAGTGAGGATTATCGGTTGGTTGAGAAATATCTC CAAACTACGCATGCTCCAACTCATTCGGACTGGTCACTCGAACTGGAAGA GGTTTTCTCTCTTGAAAGGGAAGGTGAATTTGACAAGTTTGCTCCTTACA GAGATAAACTAAAGAACAAGATGCTCCTTTGGCATGGTTCTCGGTTGACG AATTTTGTGGGTATACTTAGCCAAGGATTGAGAATAGCCCCTCCTGAAGC TCCAGCAACTGGCTATATGTTTGGCAAGGGCGTCTATTTCGCTGACTTGG TCAGTAAAAGTGCTCAGTACTGTTATACTGACAAAAAAAACCCTGTGGGA TTGATGATTCTTAGTGAAGTTGCCTTGGGTGAAGTGTATGAGCTAAAGGG TGCCAAGTACATGGACAAGCCTCCAAGAGGTAAGCACTCCACTAAAGGCC TTGGCAGACAAGTACCCCAGGAGTCAGAATATGTTAAATGGAGAGATGAC GTCATTGTTCCTTGCGGAAAGCCAGTTCCATCAAATGTGAAGGCAACAGA GCTGAACTACAATGAGTACATCGTCTATAATACAGCTCAAGTTAAGATGC AATTCTTACTGAAGGTGAGGTTCCATCATAAACGGTGA

Pep:

>DCAR_018467pep MASPPKPWKAEYAKSGRSSCRTCKSPIDKEAFRLGKMVQSSQFDGFMPMW NHASCILKKANQIKSQDDVDGLDMLRWEDQEKIRKYADGSEAPKSGGSRS SRAAASAATASGIEVSQSSRATCRQCNQKIMKGDVRISAKPEGQGAKGVT WHHANCYMESSPTIEVNKLSGWDDLSASDQTAVIAMIEKSTSKGPINDPV DDTKPMQQSTSKGNAKRKSASTSEQKLKVAKAEGDVLPNTPKKNADALGI DSPRASTVDRELETQSKELWSLKDDLRKHVTTSELREMLEVNEQNSKGSE LDLRDRCADGMLFGKLENCPLCSGYLYYSGGMYKCSGFLSAWSKCSYSTT ESVRVQGKWKIPEGSENEYLVKWFKSQKVKKPVRVLPPPTPSKPSGTPST KDGRLEDLKVAFNGLSGPAMEEWRSKLGEVGVQIHEKVKKETNCLVVSEM VNGQNAEVKKARRMKLPIVRENYLVDCLKRQKKLPFDLYKIEALGETSGS DVVTVKVKGRGAVHEASGLQDTGHILEVGKSIYNTTLNLSDLSTGVNSYY ILQIIEEDKGSNCYVFRKWGRVGNEKIGGNKLDERDKEDAIEEFERLFLE KTGNTWRAWERKVDFQKRPGKFFPLEIDYGVNKEMVQRKNFKDSDSKLAR PLLELMKMLFNVETYRAAMMEFEINMSEMPLGKLSKRNIQQGFEALTEIQ NLLSSSAYNPTVRDSMIVDASNRFFTMIPSVHPHVIRDEDDFKSKVKMLE ALQDIEIASRLVGFDTDDSVSVDEKYKMLHCEMNPLPHNSEDYRLVEKYL QTTHAPTHSDWSLELEEVFSLEREGEFDKFAPYRDKLKNKMLLWHGSRLT NFVGILSQGLRIAPPEAPATGYMFGKGVYFADLVSKSAQYCYTDKKNPVG LMILSEVALGEVYELKGAKYMDKPPRGKHSTKGLGRQVPQESEYVKWRDD VIVPCGKPVPSNVKATELNYNEYIVYNTAQVKMQFLLKVRFHHKR*