Resource Type:
Genetic Marker
Name:
MK002655 DcAOX2a
Identifier:
MK002655_DcAOX2a
Organism:
Marker Type:
STS
Publication:
Budahn H, Barański R, Grzebelus D, Kiełkowska A, Straka P, Metge K, Linke B, Nothnagel T. Mapping genes governing flower architecture and pollen development in a double mutant population of carrot.. Frontiers in plant science. 2014; 5:504.
Cross Reference:
| NCBI Nuccore |  |
|---|
Relationship:
| Relationships |
|---|
| The genetic_marker, MK002655 DcAOX2a, is adjacent to primer, DcAOX2a-F. |
| The genetic_marker, MK002655 DcAOX2a, is adjacent to primer, DcAOX2a-R. |
| The genetic_marker, MK002655 DcAOX2a, is located in gene, DCAR_021859. |
| The genetic_marker, MK002655 DcAOX2a, is located in gene, LOC108224450. |
| The marker_locus, DcAOX2a, is an instance of genetic_marker, MK002655 DcAOX2a. |
MapViewer Marker Map Positions:
| Map Name | Linkage Group | Position | Locus | MapViewer |
|---|---|---|---|---|
| 2014 yel×cola | LG6 | 65.6 | DcAOX2a | MapViewer |
Synonyms:
- MK002655
Sequence Coordinates:
DCARv2_Chr6:19098199..19100161+
View location in JBrowse:
Sequence:
ATGAATCATCTGTTAGCCAAGTCTGTGATGCGCCGTTTGATCAGCGGCGG
TGGCTCCATCCGCTCGGCGTCTCCGGCGCCGGCGCTGACGATATTCCGGG
CAGTGACTGAATCGGCGACGGCGAGGAGAGAGAGCTTAGTGTATGTGAGG
GGAGGAGGTGTTGAGTTGATGAAGAGGATGATGAGCAGTGAGGCGGTGAA
GGTGACGGAGGAGAAGAAGGAAGTGAAGGAGGAGAAGAAGAAGAGTGAGA
GTAACGTGGTGGTGTCGAGTTATTGGGGAGTGGCGAGGCCGAGGATTACT
AAGGAGGATGGTACTGAGTGGCCTTGGAATTGTTTTATGCCATGGGAAAC
ATATCAAGCTGACTTGTCGATAGATCTTGGTAAGCACCATGTACCAAAGA
CATTTCTTGATAAGGTGGCTTACAAGACTGTGAAACTACTAAGGATTCCG
ACGGATGTTTTCTTCCAGAGGCGATATGGATGTCGTGCAATGATGCTAGA
AACTGTAGCAGCTGTTCCTGGTATGGTCGGAGGTATGCTGCTGCATCTGA
GGTCTCTCCGCAAGTTTCAGCAGAGTGGAGGTTGGATTAAGGCGTTGCTA
GAAGAAGCTGAGAATGAGAGGATGCACTTGATGACTATGGTTGAACTTGT
GAAACCAAAATGGTATGAGAGGTTTCTGGTTCTTACCGTGCAAGGAGTCT
TCTTCAATGCTTTCTTTGTTCTTTATATGATGTCCCCCAAAGTGGCACAT
AGAGTTGTTGGGTACCTGGAAGAAGAGGCAATACATTCATATACCGAGTA
TCTGAAGGATATTGAAAGTGGTGCAATTGAAAATGTTCCTGCTCCTGCTA
TAGCTATTGATTACTGGAGACTTCCTAAAGATGCCAAACTAAAAGATGTC
ATAACTGTGATCCGTGCTGATGAGGCTCATCATCGGGATGTTAACCACTT
TGCTTCTGACATTCATTTCCAGGGGAAAGAATTAAGGGATGCACCAGCTC
CGCTTGGTTATCATTGACACTATTTGACTACCACATAGCTATATATCTCT
GAATATAATAAGATCTTTGTATCTACTGTATATGCCATACCCGCTGCTGG
ATATCGTAATTCAGAACAAGTCACACGACTATAGTAGAGATGCCATGCCT
ACTGCTTAATATTGTGTCACTCTGAAGTAAATCATGATAGTAGAGATTCT
TATCACGTTGTCGCCATATGGTCCATTTGGTTGAATGCCGTGCACAAGAC
AGGTTGTTTGTGTAGAATTGATTGGATTTTTAAGAAACAATTATTGTTTA
TTTTAATGTGTGCATGCTTTAGATACTCATTAATCATTATATAAGCATAT
TAGGGCAAAAAAAAAAAAAAAA
Sequences:
>MK002655_DcAOX2a ID=MK002655_DcAOX2a; Name=MK002655 DcAOX2a; organism=Daucus carota; type=genetic_marker
ATGAATCATCTGTTAGCCAAGTCTGTGATGCGCCGTTTGATCAGCGGCGG
TGGCTCCATCCGCTCGGCGTCTCCGGCGCCGGCGCTGACGATATTCCGGG
CAGTGACTGAATCGGCGACGGCGAGGAGAGAGAGCTTAGTGTATGTGAGG
GGAGGAGGTGTTGAGTTGATGAAGAGGATGATGAGCAGTGAGGCGGTGAA
GGTGACGGAGGAGAAGAAGGAAGTGAAGGAGGAGAAGAAGAAGAGTGAGA
GTAACGTGGTGGTGTCGAGTTATTGGGGAGTGGCGAGGCCGAGGATTACT
AAGGAGGATGGTACTGAGTGGCCTTGGAATTGTTTTATGCCATGGGAAAC
ATATCAAGCTGACTTGTCGATAGATCTTGGTAAGCACCATGTACCAAAGA
CATTTCTTGATAAGGTGGCTTACAAGACTGTGAAACTACTAAGGATTCCG
ACGGATGTTTTCTTCCAGAGGCGATATGGATGTCGTGCAATGATGCTAGA
AACTGTAGCAGCTGTTCCTGGTATGGTCGGAGGTATGCTGCTGCATCTGA
GGTCTCTCCGCAAGTTTCAGCAGAGTGGAGGTTGGATTAAGGCGTTGCTA
GAAGAAGCTGAGAATGAGAGGATGCACTTGATGACTATGGTTGAACTTGT
GAAACCAAAATGGTATGAGAGGTTTCTGGTTCTTACCGTGCAAGGAGTCT
TCTTCAATGCTTTCTTTGTTCTTTATATGATGTCCCCCAAAGTGGCACAT
AGAGTTGTTGGGTACCTGGAAGAAGAGGCAATACATTCATATACCGAGTA
TCTGAAGGATATTGAAAGTGGTGCAATTGAAAATGTTCCTGCTCCTGCTA
TAGCTATTGATTACTGGAGACTTCCTAAAGATGCCAAACTAAAAGATGTC
ATAACTGTGATCCGTGCTGATGAGGCTCATCATCGGGATGTTAACCACTT
TGCTTCTGACATTCATTTCCAGGGGAAAGAATTAAGGGATGCACCAGCTC
CGCTTGGTTATCATTGACACTATTTGACTACCACATAGCTATATATCTCT
GAATATAATAAGATCTTTGTATCTACTGTATATGCCATACCCGCTGCTGG
ATATCGTAATTCAGAACAAGTCACACGACTATAGTAGAGATGCCATGCCT
ACTGCTTAATATTGTGTCACTCTGAAGTAAATCATGATAGTAGAGATTCT
TATCACGTTGTCGCCATATGGTCCATTTGGTTGAATGCCGTGCACAAGAC
AGGTTGTTTGTGTAGAATTGATTGGATTTTTAAGAAACAATTATTGTTTA
TTTTAATGTGTGCATGCTTTAGATACTCATTAATCATTATATAAGCATAT
TAGGGCAAAAAAAAAAAAAAAA
This is the primary representative sequence for this feature.
Sequence Length:
1372
Product Length:
yel mutant 1900bp
Pcr Condition:
Annealing temperature 55