MK004027 K1471

Resource Type: 
Genetic Marker
Name: 
MK004027 K1471
Identifier: 
MK004027_K1471
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004027 K1471, is adjacent to primer, K1471_X.
The genetic_marker, MK004027 K1471, is adjacent to primer, K1471_Y.
The genetic_marker, MK004027 K1471, is adjacent to primer, K1471_Common.
The genetic_marker, MK004027 K1471, is located in gene, DCAR_016789.
The genetic_marker, MK004027 K1471, is located in gene, LOC108223255.
The marker_locus, K1471, is an instance of genetic_marker, MK004027 K1471.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH519.541K1471MapViewer
2016 70796 NG bin mapChr555.872K1471MapViewer
2016 Integ NG bin mapCH518.341K1471MapViewer
2016 70796 NG full mapChr555.872K1471MapViewer
Synonyms: 
  • MK004027
Sequence Coordinates: 
DCARv2_Chr5:7630990..7631042+
View location in JBrowse: 
DCARv2_Chr5:7630990..7631042+
Sequence: 
TTTCTCTGGARCGTTGTACCTGCAGCTTATATGAGTTRATAACAACATAT
TCTGATAGTTGTCAAAGSCAA
Sequences: 
>MK004027_K1471 ID=MK004027_K1471; Name=MK004027 K1471; organism=Daucus carota; type=genetic_marker
TTTCTCTGGARCGTTGTACCTGCAGCTTATATGAGTTRATAACAACATAT
TCTGATAGTTGTCAAAGSCAA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TTTCTCTGGARCGTTGTACCTGCAGCTTATATGAGTT
Three Prime Flanking Region: 
ATAACAACATATTCTGATAGTTGTCAAAGSCAA
SNP: 
A/G