MK005198 K2642

Resource Type: 
Genetic Marker
Name: 
MK005198 K2642
Identifier: 
MK005198_K2642
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005198 K2642, is adjacent to primer, K2642_X.
The genetic_marker, MK005198 K2642, is adjacent to primer, K2642_Y.
The genetic_marker, MK005198 K2642, is adjacent to primer, K2642_Common.
The genetic_marker, MK005198 K2642, is located in gene, DCAR_012319.
The genetic_marker, MK005198 K2642, is located in gene, LOC108214678.
The marker_locus, K2642, is an instance of genetic_marker, MK005198 K2642.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 80592 NG full mapChr354.924K2642MapViewer
2016 Integ NG full mapCH362.874K2642MapViewer
Synonyms: 
  • MK005198
Sequence Coordinates: 
DCARv2_Chr3:45827034..45827094+
View location in JBrowse: 
DCARv2_Chr3:45827034..45827094+
Sequence: 
TCTCTCTTACATAATCACCCATTTTTCACAAACCCCARGTTCTTGATTTT
CTACACTGATAGATCTGATTT
Sequences: 
>MK005198_K2642 ID=MK005198_K2642; Name=MK005198 K2642; organism=Daucus carota; type=genetic_marker
TCTCTCTTACATAATCACCCATTTTTCACAAACCCCARGTTCTTGATTTT
CTACACTGATAGATCTGATTT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TCTCTCTTACATAATCACCCATTTTTCACAAACCCCA
Three Prime Flanking Region: 
GTTCTTGATTTTCTACACTGATAGATCTGATTT
SNP: 
A/G