Resource Type:
Polypeptide
Name:
DCAR_027476
Identifier:
DCAR_027476.mRNA-protein
Sequence:
MDRQPHDYSAMAFAQQQQQAANIQQQQQQFGFHPQHQQFPPSVHGPPFIQ
PHPSMQPYPFHHMQQGQLHPHPPHPHLLHLQQQQQLNPSFPPHMPPHIVP
SPFRGSYDSPPPAPPPSDPELQKCIDKLVEYAAKHGPEFEAMVRENQKDN
PAYRFLFGGDGHNYYRYTLWLATRPPGGPFNPPFPSTSIPVMHPPNPMVT
PSPPNDPKLNASGVGPGATSSLLNVPQMHQPPFPPFYDQQHSQPFPGTMG
GPGRQHYDQSSGAFKGLSGPLPSDVAMELNNVLNGLTGTKESIKGAKLWF
MQRSPFAPALAEALRDRVYAVDDSERQLHILFLSNDILFDREYTYQVSIT
IILQDMFEIVTRDMMVIETCLQRRTNTHDLSNEALAFRPVLGSILARIYH
NPQNKEENQERLQKVLQFWASKEVYDRDTIRLLESEMIGGVPTNSFTGHP
QRDFSSVSADASTFSGLPHQTSNHNVLHWQSDKQNFSDQERLENQVPSLS
AMPQQFLQNSSPAGSFPGAIPMLSSAQPTNLQSAPHLLPAQTSNIGEKLP
PYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTMIPPSTTSPSELLER
VSKFFREIGEVNPSEGPLNSADDDDEYERDSPVRKGGTCIPPPPNLQVDP
ETGTLPDGSVERKPGSVSSGRLGLGATANPNEASQYDDVYSSYRKQRSTN
YHTSMSARSATTTTR*
Sequence Length:
716
Sequence Checksum:
441afa9fda9d8a7f2ae5fb5f63164cd0
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_027476, derives from mRNA, DCAR_027476. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_027476 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_027476 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7AA58 ((Putative calcium homeostasis endoplasmic reticulum protein-like isoform X1 {ECO:0000313|EMBL:MPA53045.1}))
HSP 1 Score: 874.774 bits (2259), Expect = 0.000e+0
Identity = 499/699 (71.39%), Postives = 555/699 (79.40%), Query Frame = 0
Match: A0A5B7AA58 ((Putative calcium homeostasis endoplasmic reticulum protein-like isoform X1 {ECO:0000313|EMBL:MPA53045.1}))
HSP 1 Score: 874.774 bits (2259), Expect = 0.000e+0
Identity = 499/699 (71.39%), Postives = 555/699 (79.40%), Query Frame = 0
Query: 30 FGFHPQHQQFPPSVHGPPFIQPHPSMQPYPFH-HMQQ-GQLHPHPP-HPHLLHLQQQQQLNPSFPPHMPPHIVPSPFRGSYDSPPP-APPPSDPELQKCIDKLVEYAAKHGPEFEAMVRENQKDNPAYRFLFGGDGHNYYRYTLWLATRPPGGPFNPPFPSTSIPVMHPPNPMVTPSPPNDPKLNASGVGPGATSSLLNVPQMHQPPFPPFYDQQ-HSQPFPGTMGGPGRQHYDQSSGAFKGLSGPLPSDVAMELNNVLNGLTGTKESIKGAKLWFMQRSPFAPALAEALRDRVYAVDDSERQLHILFLSNDILFDREYTYQVSITIILQDMFEIVTRDMMVIETCLQRRTNTHDLSNEALAFRPVLGSILARIYHNPQNKEENQERLQKVLQFWASKEVYDRDTIRLLESEMIGGVPTNSFTGHPQRDFSSVSADASTFSGLPHQTSNHNVLHWQSDKQN----FSDQERLENQVPSLSAMP-----QQFLQNSSPAGSFPGAIPMLSSAQPTNLQSAPHLLPAQTSNIGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTMIPPSTTSPSELLERVSKFFREIGEVNPSEG---PLNSADDDDEYERDSPVRKGGTCIPPPPNLQVDPETGTLPDGSVERKPGSVSSGRLGLGATANPNEASQYDDVYSSYRKQRSTNYHTSMSARSAT 711
FGFHPQHQQFPPSVHGPPF+ PHPS+Q +PFH HMQQ QL PHPP HPH+LHLQQQQQ P+FPPH+PPH+VPSPF G YDS PP A PPSDPEL+K IDKLVEYAAK+GPEFEAM+RE Q+DNPAY FLFGG+GHNYYRY LWL+TRP GGPFN PFPS+SIP+MHPPNP++ PSP N P LNAS GA++S+L PQMHQPPFP FY+QQ HSQ F G GR +DQSS +FKGLSGPLPSDVAMELNNVLN L+GTKESIKGAK+WFMQRSPFAPALAEALRDRV+AVDDSERQLHI++L+NDILFD LQRR N HDL NEALAF+PVLG +LARIYHNPQNKEENQ RLQK+LQFWASKEVYD DTIR LE+EM G P +S P ++FS+ + D S GL Q +NHNVL WQ DKQN F DQE NQVP ++AMP QQFL NS AG+F G++P+ SS QP N Q PHLLP T+N+GEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPT+IPPS SPSE+LERVSKFF+EIGEVNPSEG P +S D+DDEYER+ P RKGG CIPPPPNLQVDP+TGT DGSVERKPGS SGRLGLGATANP EASQYDDVYSSYRKQRST YH+SMSAR+
Sbjct: 32 FGFHPQHQQFPPSVHGPPFLPPHPSLQQFPFHRHMQQPQQLLPHPPTHPHVLHLQQQQQPPPAFPPHLPPHLVPSPFLGPYDSAPPLAAPPSDPELEKRIDKLVEYAAKNGPEFEAMIREKQQDNPAYSFLFGGEGHNYYRYKLWLSTRPSGGPFNAPFPSSSIPMMHPPNPLMNPSPLNAP-LNASAAA-GASASMLGTPQMHQPPFPSFYEQQQHSQSFVGH----GRPDFDQSSRSFKGLSGPLPSDVAMELNNVLNNLSGTKESIKGAKIWFMQRSPFAPALAEALRDRVFAVDDSERQLHIIYLANDILFD-----------------------------SLQRRINPHDLDNEALAFKPVLGFMLARIYHNPQNKEENQLRLQKILQFWASKEVYDHDTIRGLENEM-NGGPPSSSFPGPPKEFSAAATDPSA-GGLSQQPTNHNVLQWQPDKQNSVPNFPDQEH-PNQVPPVAAMPPSLGAQQFLPNSVTAGAFMGSMPIPSSVQPAN-QQLPHLLPTPTTNVGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTVIPPSNVSPSEILERVSKFFKEIGEVNPSEGAMKPSDSRDEDDEYEREPPTRKGGACIPPPPNLQVDPDTGTYADGSVERKPGSSGSGRLGLGATANPTEASQYDDVYSSYRKQRSTTYHSSMSARATA 691
BLAST of DCAR_027476 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7A9K8 ((Putative calcium homeostasis endoplasmic reticulum protein-like isoform X1 {ECO:0000313|EMBL:MPA53044.1}))
HSP 1 Score: 857.44 bits (2214), Expect = 0.000e+0
Identity = 508/731 (69.49%), Postives = 571/731 (78.11%), Query Frame = 0
Match: A0A5B7A9K8 ((Putative calcium homeostasis endoplasmic reticulum protein-like isoform X1 {ECO:0000313|EMBL:MPA53044.1}))
HSP 1 Score: 857.44 bits (2214), Expect = 0.000e+0
Identity = 508/731 (69.49%), Postives = 571/731 (78.11%), Query Frame = 0
Query: 1 MDRQPHDYSAMAFAQQQQQAANIQQQQQQF--GFHPQHQQFPPSVHGPPFIQPHPSMQPYPFH-HMQQ-GQLHPHPP-HPHLLHLQQQQQLNPSFPPHMPPHIVPSPFRGSYDSPPP-APPPSDPELQKCIDKLVEYAAKHGPEFEAMVRENQKDNPAYRFLFGGDGHNYYRYTLWLATRPPGGPFNPPFPSTSIPVMHPPNPMVTPSPPNDPKLNASGVGPGATSSLLNVPQMHQPPFPPFYDQQ-HSQPFPGTMGGPGRQHYDQSSGAFKGLSGPLPSDVAMELNNVLNGLTGTKESIKGAKLWFMQRSPFAPALAEALRDRVYAVDDSERQLHILFLSNDILFDREYTYQVSITIILQDMFEIVTRDMMVIETCLQRRTNTHDLSNEALAFRPVLGSILARIYHNPQNKEENQERLQKVLQFWASKEVYDRDTIRLLESEMIGGVPTNSFTGHPQRDFSSVSADASTFSGLPHQTSNHNVLHWQSDKQN----FSDQERLENQVPSLSAMP-----QQFLQNSSPAGSFPGAIPMLSSAQPTNLQSAPHLLPAQTSNIGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTMIPPSTTSPSELLERVSKFFREIGEVNPSEGPLNSADD---DDEYERDSPVRKGGTCIPPPPNL-QVDPETGTLPDGSVERKPGSVSSGRLGLGATANPNEASQYDDVYSSYRKQRSTNYHTSMSARSAT 711
MDRQ HDY+A A QQ QQQ GFHPQHQQFPPSVHGPPF+ PHPS+Q +PFH HMQQ QL PHPP HPH+LHLQQQQQ P+FPPH+PPH+VPSPF G YDS PP A PPSDPEL+K IDKLVEYAAK+GPEFEAM+RE Q+DNPAY FLFGG+GHNYYRY LWL+TRP GGPFN PFPS+SIP+MHPPNP++ PSP N P LNAS GA++S+L PQMHQPPFP FY+QQ HSQ F G GR +DQSS +FKGLSGPLPSDVAMELNNVLN L+GTKESIKGAK+WFMQRSPFAPAL EALRDRV+A+DDSERQLHI++L NDILFD LQRR N +DL NEALAF+PVLGS+LARIYHNPQNKEENQ RLQK+LQFW+SKEVY+ DTI LE+EMIGG P +SF GHP+ S ++ S+ +GLP Q +N NVLHWQ DKQN SDQE + QVP + AMP Q FL NS P G F G +P+ SS QP N Q PH L + T+N+GEKLPPYPLFPPGLIPGMV+KMQIGSGVPYSPMSPLDIPT+IPPS SPS++LERVSKFF+EIGEVNPSEGP+ +D D+EYER+ P+RKGG CIPPPPNL QVDPETGT DGSVERKPGS SGRLGLGATANPNEASQYDDVY+SYRKQRSTNYH+SMSARSAT
Sbjct: 1 MDRQAHDYAAAAAMAFAQQQQQAANMQQQQQFGFHPQHQQFPPSVHGPPFLPPHPSLQQFPFHRHMQQPQQLLPHPPTHPHVLHLQQQQQPPPAFPPHLPPHLVPSPFLGPYDSAPPLAAPPSDPELEKRIDKLVEYAAKNGPEFEAMIREKQQDNPAYSFLFGGEGHNYYRYKLWLSTRPSGGPFNAPFPSSSIPMMHPPNPLMNPSPLNAP-LNASAAA-GASASMLGTPQMHQPPFPSFYEQQQHSQSFVGH----GRPDFDQSSRSFKGLSGPLPSDVAMELNNVLNNLSGTKESIKGAKIWFMQRSPFAPALGEALRDRVFAMDDSERQLHIIYLVNDILFD-----------------------------SLQRRINPNDLDNEALAFKPVLGSMLARIYHNPQNKEENQSRLQKILQFWSSKEVYEHDTICGLENEMIGGPPPSSFPGHPKE--LSAASTDSSAAGLPQQATNLNVLHWQPDKQNSVPTLSDQEHPDKQVPLVPAMPPSLVNQPFLPNSVPTGGFMGPMPVPSSIQPAN-QQPPHFLSSPTANVGEKLPPYPLFPPGLIPGMVKKMQIGSGVPYSPMSPLDIPTVIPPSNVSPSQILERVSKFFKEIGEVNPSEGPMKPSDSRDEDEEYEREPPIRKGGACIPPPPNLQQVDPETGTFADGSVERKPGSSGSGRLGLGATANPNEASQYDDVYTSYRKQRSTNYHSSMSARSAT 693
BLAST of DCAR_027476 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6QAM3 ((Calcium homeostasis endoplasmic reticulum protein {ECO:0000313|EMBL:PSS04950.1}))
HSP 1 Score: 838.565 bits (2165), Expect = 0.000e+0
Identity = 478/732 (65.30%), Postives = 537/732 (73.36%), Query Frame = 0
Match: A0A2R6QAM3 ((Calcium homeostasis endoplasmic reticulum protein {ECO:0000313|EMBL:PSS04950.1}))
HSP 1 Score: 838.565 bits (2165), Expect = 0.000e+0
Identity = 478/732 (65.30%), Postives = 537/732 (73.36%), Query Frame = 0
Query: 1 MDRQPHDYSAMAFAQQQQQAANIQQQQQQFGFHPQHQQFPPSVHGPPFIQPHPSMQPYPF-HHMQQGQLHPHPPHPHLLHLQQQQQLNPSFPPHMPPHIVPSPFRGSYDSPPPAPPPSDP-ELQKCIDKLVEYAAKHGPEFEAMVRENQKDNPAYRFLFGGDGHNYYRYTLWLATRPPGGPFNPPFPSTSIPVMHPPNPMVTPSPPNDPKLNASGVGPGATSSLLNVPQMHQPPFPP-FYDQ-QHSQPFPGTMGGPGRQHYDQSSGAFKGLSGPLPSDVAMELNNVLNGLTGTKESIKGAKLWFMQRSPFAPALAEALRDRVYAVDDSERQLHILFLSNDILFDREYTYQVSITIILQDMFEIVTRDMMVIETCLQRRTNTHDLSNEALAFRPVLGSILARIYHNPQNKEENQERLQKVLQFWASKEVYDRDTIRLLESEMIGGVPTNSFTGHPQRDFSSVSADASTFSGLPHQTSNHNVLHWQSDKQ----NFSDQERLENQVPSLSAMP-----QQFLQNSSPAGSFPGAIPMLSSAQPTNLQSAPHLLPAQTSNIGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTMIPPSTTSPSELLERVSKFFREIGEVNPSEGPLNSADDDDEY------ERDSPVRKGGTCIPPPPNLQVDPETGTLPDGSVERKPG-SVSSGRLGLGATANPNEASQYDDVYSSYRKQRSTNYHTSMSARSATT 712
MDRQ HDY+A A QQQ A QQQ+ FGFHPQHQQFPPSVHGPPF+ PHPS+Q YPF HMQQ H Q +FPPHMPPH+VPS G YDSPPP ELQKCIDKLVEY AK+GPEFEAM+RE Q+DNP Y FLFGG+GHNYYRY LWL+TRPPGGP+NPPFPS+S+P MHP NPM+ SP N P LL PQ+HQPPFPP FY+ QHSQPF G GR YDQSS FKGLSGPLPSDV MEL+NVLN L+GTKESIKGAK+WFMQRSPFAPALAEALRDRV++VDDSERQLHI++L+NDILFD LQRR N HDL NEALAF+PVLGS+LARI+HNPQNKEENQ RLQK+LQFWASKEVYD DTI E+EM GG P N F G +D S+ S D ST +GLP + +NH+ L WQ+D++ N SD+E + QVPS++ MP Q FL NS P G F G++PM SS QP N Q+ LLPA T+N GEK+PPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPT IPPS+ SPSE+LERVSKFF+ IGEVNPSEGP+ + D + ER+SPVRKGG CIPPPPNLQVDPETGT DGSVE+KPG S SGRLGLGATANP+EASQYDDVYSSYRKQRSTNYH+SMSAR+ATT
Sbjct: 1 MDRQAHDYAAAM-AYAQQQQAANIQQQKPFGFHPQHQQFPPSVHGPPFLSPHPSLQQYPFPRHMQQPHQLHPH---PPPHPHLLHQPPSAFPPHMPPHLVPSSLLGPYDSPPPPSASPSDPELQKCIDKLVEYTAKNGPEFEAMIREKQQDNPVYSFLFGGEGHNYYRYKLWLSTRPPGGPYNPPFPSSSVPTMHPQNPMMNSSPLNAP--------------LLGGPQIHQPPFPPSFYEHHQHSQPFVGH----GRSDYDQSSRPFKGLSGPLPSDVGMELSNVLNNLSGTKESIKGAKIWFMQRSPFAPALAEALRDRVFSVDDSERQLHIIYLANDILFD-----------------------------SLQRRNNPHDLDNEALAFKPVLGSMLARIFHNPQNKEENQLRLQKILQFWASKEVYDHDTICAFENEMAGGPPMNLFLGS-LKDLSAASTDPST-AGLPQRATNHSSLQWQADQRGLVTNVSDKEHPDKQVPSIAGMPSPLAAQSFLPNSVPTGPFTGSLPMPSSIQPVNQQA---LLPASTANNGEKMPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTAIPPSSVSPSEVLERVSKFFKAIGEVNPSEGPMKGSGDSKDDGDDYYEERESPVRKGGACIPPPPNLQVDPETGTFADGSVEQKPGSSTGSGRLGLGATANPSEASQYDDVYSSYRKQRSTNYHSSMSARAATT 676
BLAST of DCAR_027476 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6H1T4 ((Uncharacterized protein {ECO:0000313|EMBL:CCB46153.1}))
HSP 1 Score: 836.254 bits (2159), Expect = 0.000e+0
Identity = 483/730 (66.16%), Postives = 544/730 (74.52%), Query Frame = 0
Match: F6H1T4 ((Uncharacterized protein {ECO:0000313|EMBL:CCB46153.1}))
HSP 1 Score: 836.254 bits (2159), Expect = 0.000e+0
Identity = 483/730 (66.16%), Postives = 544/730 (74.52%), Query Frame = 0
Query: 1 MDRQPHDYSAMAFAQQQQQAANIQQQQQQFGFHPQHQQFPPSVHGPPFIQPHPSMQPYPFH-HMQQGQLHPHPPHPHLLHLQQQQQLNP--SFPPHMPPHIVPSPFRGSYDSPPPAPPPSDP-ELQKCIDKLVEYAAKHGPEFEAMVRENQKDNPAYRFLFGGDGHNYYRYTLWLATRPPGGPFNPPFPSTSIPVMHPP-NPMVTPSPPNDPKLNASGVGPGATSS-LLNVPQMHQPPFPPFYDQQHSQPFPGT-MGGPGRQHYDQSSGAFKGLSGPLPSDVAMELNNVLNGLTGTKESIKGAKLWFMQRSPFAPALAEALRDRVYAVDDSERQLHILFLSNDILFDREYTYQVSITIILQDMFEIVTRDMMVIETCLQRRTNTHDLSNEALAFRPVLGSILARIYHNPQNKEENQERLQKVLQFWASKEVYDRDTIRLLESEMIGGVPTNSFTGHPQRDFSSVSADASTFSGLPHQTSNHNVLHWQSDKQ----NFSDQERLENQVPSLSAMP-----QQFLQNSSPAGSFPGAIPMLSSAQPTNLQSAPHLLPAQTSNIGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTMIPPSTTSPSELLERVSKFFREIGEVNPSEGPL---NSADDDDEYERDSPVRKGGTCIPPPPNLQVDPETGTLPDGSVERKPGSVSSGRLGLGATANPNEASQYDDVYSSYRKQRSTNYHTSMSARSAT 711
MDRQ HDY+A QQQQ A QQQQ FGFHPQHQQFPPSVHGPPF+ PHPS+Q YPFH HM P PH L QQQ FPPH+P H+VPSPF G ++S PP P EL K IDKLVEYAAK+GPEFE M+RE Q+DNPAY FLFGG+GHNYYRY LWL+TR GGPFN PFP +SIP+MH P NPM+ PS LNA S+ +L PQMHQPP+ PFYDQQ Q G GR +D SS +FKGLSGPLPSDVAMEL+NVLN LTGTKESIKGAK+WFMQRSPFAPALAEALRDRV+AVDDSERQLHI++L+NDILFD LQRR N H+L NEALAF+PVLGS+LARIYHNPQNKEENQ RLQK+LQFWASKEVYD DTI LE EMIGG P+NSF+G P ++ S+V D S SGLP Q+++HN+ HWQ +K + +QE+ + Q+PSL+AMP QQFL N+ PAG F G++P+ SS QP N Q A HL A + +GEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPT+IPPS SPSE+LERVSKFF+EIGEVNPSEGP+ +S D+DDEYERDSPVRKGG CIPPPPNLQVDPETGT DGSVERKPGS S RLGLGATANPNE SQYDDVY+SYRKQRSTNYH+SMSAR+ T
Sbjct: 1 MDRQAHDYAAAMAFAQQQQQAANVQQQQPFGFHPQHQQFPPSVHGPPFLPPHPSLQQYPFHRHMPPQPQLHPHPPPHPHLLHLQQQQQAPSGFPPHLPSHLVPSPFHGPFESGPPPSNPPSDPELHKRIDKLVEYAAKNGPEFEVMIREKQQDNPAYSFLFGGEGHNYYRYKLWLSTRSSGGPFNSPFPPSSIPMMHSPMNPMMNPS------LNAPPAAAAGASASMLGTPQMHQPPYLPFYDQQQQQHQHPQPFLGHGRPDFDPSSKSFKGLSGPLPSDVAMELSNVLNNLTGTKESIKGAKIWFMQRSPFAPALAEALRDRVFAVDDSERQLHIIYLANDILFD-----------------------------SLQRRINPHELDNEALAFKPVLGSMLARIYHNPQNKEENQSRLQKILQFWASKEVYDHDTIYGLEGEMIGGPPSNSFSG-PHKELSAVPVDPSAVSGLP-QSAHHNIPHWQPEKPCSMPSLLEQEQPDKQMPSLAAMPPSLATQQFLPNAVPAGPFLGSMPIPSSVQPANQQPALHLPTA--AGLGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTVIPPSNVSPSEILERVSKFFKEIGEVNPSEGPMEPSDSKDEDDEYERDSPVRKGGACIPPPPNLQVDPETGTYADGSVERKPGSSGSARLGLGATANPNEVSQYDDVYTSYRKQRSTNYHSSMSARAGT 691
BLAST of DCAR_027476 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438DPH7 ((Calcium homeostasis endoplasmic reticulum protein {ECO:0000313|EMBL:RVW37329.1}))
HSP 1 Score: 832.787 bits (2150), Expect = 0.000e+0
Identity = 493/732 (67.35%), Postives = 551/732 (75.27%), Query Frame = 0
Match: A0A438DPH7 ((Calcium homeostasis endoplasmic reticulum protein {ECO:0000313|EMBL:RVW37329.1}))
HSP 1 Score: 832.787 bits (2150), Expect = 0.000e+0
Identity = 493/732 (67.35%), Postives = 551/732 (75.27%), Query Frame = 0
Query: 1 MDRQPHDYSAMAFAQQQQQAANIQQQQQQFGFHPQHQQFPPSVHGPPFIQPHPSMQPYPFH-HM---QQGQLHPHPPHPHLLHLQQQQQLNPSFPPHMPPHIVPSPFRGSYDSPPPAPPPSDP-ELQKCIDKLVEYAAKHGPEFEAMVRENQKDNPAYRFLFGGDGHNYYRYTLWLATRPPGGPFNPPFPSTSIPVMHPP-NPMVTPSPPNDPKLNASGVGPGATSSLLNVPQMHQ-PPFPPFYDQQ--HSQPFPGTMGGPGRQHYDQSSGAFKGLSGPLPSDVAMELNNVLNGLTGTKESIKGAKLWFMQRSPFAPALAEALRDRVYAVDDSERQLHILFLSNDILFDREYTYQVSITIILQDMFEIVTRDMMVIETCLQRRTNTHDLSNEALAFRPVLGSILARIYHNPQNKEENQERLQKVLQFWASKEVYDRDTIRLLESEMIGGVPTNSFTGHPQRDFSSVSADASTFSGLPHQTSNHNVLHWQSDKQN----FSDQERLENQVPSLSAMP-----QQFLQNSSPAGSFPGAIPMLSSAQPTNLQSAPHLLPAQTSNIGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTMIPPSTTSPSELLERVSKFFREIGEVNPSEGPL---NSADDDDEYERDSPVRKGGTCIPPPPNLQVDPETGTLPDGSVERKPGSVSSGRLGLGATANPNEASQYDDVYSSYRKQRSTNYHTSMSARSAT 711
MDRQ HDY+A QQQQ A QQQQ FGFHPQHQ FPPSVHGPPF+ PHPS+Q YPFH HM Q PPHPHLLHLQQQQQ +FPPH+P H+VPSPF G Y+S PP P EL K IDKLVEYAAK+GPEFE M+RE Q+DNPAY FLFGG+GHNYYRY LWL+TR GGPFN PFP +SIP MH P NPM+ PS LNA GA++S+L PQMHQ P + PFYDQQ H QPF G GR +D SS +FKGLSGPLPSDVAMEL+NVLN LTGTKESIKGAK+WFMQRSPFAPALAEALRDRV+A+DDSERQLHI++L+NDILFD LQRR N H+L NEALAF+PVLGS+LARIYHNPQNKEENQ RLQK+LQFWASKEVYD DTI LE +MIGG P NSF+G ++ S+V AD S SGLP QT++HNV WQ DK + +QE+ + Q+PSL+AMP QQFL N+ PAG F G++P+ SS QP N Q A HL A + +GEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPT+IPPS SPSE+LERVSKFF+EIGEVNPSEGP+ +S D+DDEYERD PVRKGG CIPPPPNLQVDPETGT DGSVERKPGS S RLGLGATANPNE SQYDDVY+SYRKQRST YH+SMSAR T
Sbjct: 1 MDRQAHDYAAAMAFAQQQQQAANVQQQQPFGFHPQHQPFPPSVHGPPFLPPHPSLQQYPFHRHMPPQSQQLHPHPPPHPHLLHLQQQQQPPSAFPPHLPSHLVPSPFHGPYESGPPPSAPPSDPELHKRIDKLVEYAAKNGPEFEVMIREKQQDNPAYSFLFGGEGHNYYRYKLWLSTRSSGGPFNSPFPPSSIPTMHSPMNPMMNPS------LNAPPAAAGASASMLGTPQMHQQPSYLPFYDQQQQHPQPFLGH----GRPDFDPSSKSFKGLSGPLPSDVAMELSNVLNNLTGTKESIKGAKIWFMQRSPFAPALAEALRDRVFALDDSERQLHIIYLANDILFD-----------------------------SLQRRINPHELDNEALAFKPVLGSMLARIYHNPQNKEENQSRLQKILQFWASKEVYDHDTIYGLEGDMIGGPPGNSFSGL-LKELSAVPADPSAVSGLP-QTAHHNVPQWQPDKPSSMPSLLEQEQPDKQMPSLAAMPPSLATQQFLPNAVPAGPFLGSMPIPSSVQPANQQPALHLPTA--TGLGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTVIPPSNVSPSEILERVSKFFKEIGEVNPSEGPMEPSDSKDEDDEYERDPPVRKGGACIPPPPNLQVDPETGTYADGSVERKPGSSGSARLGLGATANPNEVSQYDDVYTSYRKQRSTTYHSSMSARVGT 689
BLAST of DCAR_027476 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6PYB8 ((Calcium homeostasis endoplasmic reticulum protein {ECO:0000313|EMBL:PSR98746.1}))
HSP 1 Score: 828.55 bits (2139), Expect = 0.000e+0
Identity = 491/739 (66.44%), Postives = 547/739 (74.02%), Query Frame = 0
Match: A0A2R6PYB8 ((Calcium homeostasis endoplasmic reticulum protein {ECO:0000313|EMBL:PSR98746.1}))
HSP 1 Score: 828.55 bits (2139), Expect = 0.000e+0
Identity = 491/739 (66.44%), Postives = 547/739 (74.02%), Query Frame = 0
Query: 1 MDRQPHDYSAMAFAQQQQQAANIQQQQQQFGFHPQHQQFPPSVHGPPFIQPHPSMQPYPF-HHMQQ-GQLHPHPPHPHLLHLQQQQQLNPSFPPHMPPHIVPSPFRGSYDSPPPAPPPSDP-ELQKCIDKLVEYAAKHGPEFEAMVRENQKDNPAYRFLFGGDGHNYYRYTLWLATRPPGGPFNPPFPSTSIPVMHPPNPMVTPSPPNDPKLNASGVGPGATSSLLNVPQMHQPPFPP-FYDQ-QHSQPFPGTMGGPGRQHYDQSSGAFKGLSGPLPSDVAMELNNVLNGLTGTKESIKGAKLWFMQRSPFAPALAEALRDRVYAVDDSERQLHILFLSNDILFDREYTYQVSITIILQDMFEIVTRDMMVIETCLQRRTNTHDLSNEALAFRPVLGSILARIYHNPQNKEENQERLQKVLQFWASKEVYDRDTIRLLESEMIGGVPTNSFTGHPQRDFSSVSADASTFSGLPHQTSNHNVLHWQSDKQ----NFSDQERLENQVP--------SLSAMPQQFLQNSSPAGSFPGAIPMLSSAQPTNLQSAPHLLP-AQTSNIGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTMIPPSTTSPSELLERVSKFFREIGEVNPSEGPLNSADDDDEY-------ERDSPVRKGGTCIPPPPNLQVDPETGTLPDGSVERKPG-SVSSGRLGLGATANPNEASQYDDVYSSYRKQRSTNYHTSMSARSATTT 713
MDRQ HDY+A A QQQ A QQQQQFGFHPQHQQFPPS HGPPF+ PHPS+Q YPF HMQQ QLHPHP HLLH Q P+FPPHMPPH+VPS G YDSPPP P ELQKCIDKLVEY AK+GPEFEAM+RE Q+DNP Y FLFGG+GHNYYRY LWL+TRPPGGP+NPPFPS+S+P MHP NPM+ PS N P LL PQ+HQPPFPP FY+ QHSQ F G GR YDQSS FKGLSGPLPSDV MEL+NVLN L+GTKESIKGAK+WFMQRSPFAPALAEALRDRV++VDDSERQLHI++L+NDILFD LQRR N HDL NEALAF+PVLGS+LARI+H+PQNKEENQ RLQK+LQFWASKEVYD DTIR LE+EM GG P F G +D S+ S D ST +GLP NH+ L WQ+DKQ N SD+E + Q+P SL+A P FL NS P G F G++P+ SS QP N Q+ LLP + T+N GEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPT+IPPS+ SPSE+LERVSKFF+EIGEVNPSEGP+ + D + ER+SPVRKGG CIPPPPNLQVDPETGT DGSVERKPG S SGRLGLGATANPNE SQYDDVYSSYRKQRSTNYHTSMSAR++TT+
Sbjct: 1 MDRQAHDYAAAM-AFAQQQQAANIQQQQQFGFHPQHQQFPPSAHGPPFLSPHPSLQQYPFPRHMQQPHQLHPHP---HLLH-----QPPPAFPPHMPPHLVPSSLLGPYDSPPPPSAPPSDPELQKCIDKLVEYTAKNGPEFEAMIREKQQDNPVYSFLFGGEGHNYYRYKLWLSTRPPGGPYNPPFPSSSVPTMHPSNPMMNPSSLNAP--------------LLGGPQIHQPPFPPSFYEHHQHSQTFVGH----GRSDYDQSSRPFKGLSGPLPSDVGMELSNVLNNLSGTKESIKGAKIWFMQRSPFAPALAEALRDRVFSVDDSERQLHIVYLANDILFD-----------------------------SLQRRINPHDLDNEALAFKPVLGSMLARIFHHPQNKEENQLRLQKILQFWASKEVYDHDTIRALENEMAGGPPMKLFPGS-FKDLSAASTDPST-AGLPQHAPNHSALQWQADKQGLVPNLSDKEHPDKQLPPIVGGMPSSLAAQP--FLPNSVPTGPFTGSLPIPSSIQPANQQA---LLPTSSTANTGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTVIPPSSVSPSEVLERVSKFFKEIGEVNPSEGPMKGSGDSKDDDDDDYYAERESPVRKGGACIPPPPNLQVDPETGTFADGSVERKPGTSTGSGRLGLGATANPNEVSQYDDVYSSYRKQRSTNYHTSMSARASTTS 676
BLAST of DCAR_027476 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0DXF5 ((SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein {ECO:0000313|EMBL:GFS43072.1}))
HSP 1 Score: 826.624 bits (2134), Expect = 0.000e+0
Identity = 490/735 (66.67%), Postives = 544/735 (74.01%), Query Frame = 0
Match: A0A7J0DXF5 ((SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein {ECO:0000313|EMBL:GFS43072.1}))
HSP 1 Score: 826.624 bits (2134), Expect = 0.000e+0
Identity = 490/735 (66.67%), Postives = 544/735 (74.01%), Query Frame = 0
Query: 1 MDRQPHDYSAMAFAQQQQQAANIQQQQQQFGFHPQHQQFPPSVHGPPFIQPHPSMQPYPF-HHMQQ-GQLHPHPPHPHLLHLQQQQQLNPSFPPHMPPHIVPSPFRGSYDSPPPAPPPSDP-ELQKCIDKLVEYAAKHGPEFEAMVRENQKDNPAYRFLFGGDGHNYYRYTLWLATRPPGGPFNPPFPSTSIPVMHPPNPMVTPSPPNDPKLNASGVGPGATSSLLNVPQMHQPPFPP-FYDQ-QHSQPFPGTMGGPGRQHYDQSSGAFKGLSGPLPSDVAMELNNVLNGLTGTKESIKGAKLWFMQRSPFAPALAEALRDRVYAVDDSERQLHILFLSNDILFDREYTYQVSITIILQDMFEIVTRDMMVIETCLQRRTNTHDLSNEALAFRPVLGSILARIYHNPQNKEENQERLQKVLQFWASKEVYDRDTIRLLESEMIGGVPTNSFTGHPQRDFSSVSADASTFSGLPHQTSNHNVLHWQSDKQ----NFSDQERLENQVPSLSAMP-----QQFLQNSSPAGSFPGAIPMLSSAQPTNLQSAPHLLP-AQTSNIGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTMIPPSTTSPSELLERVSKFFREIGEVNPSEGPL------NSADDDDEYERDSPVRKGGTCIPPPPNLQVDPETGTLPDGSVERKPG-SVSSGRLGLGATANPNEASQYDDVYSSYRKQRSTNYHTSMSARSATTT 713
MDRQ HDY+A A QQQ A QQQQQFGFHPQHQQFPPS HGPPF+ PHPS+Q YPF HMQQ QLHPHP HLLH Q P+FPPHMPPH+VPS G YDSPPP P ELQKCIDKLVEY AK+GPEFEAM+RE Q+DNP Y FLFGG+GHNYYRY LWL+TRPPGGP+NPPFPS+S+P MHP NPM+ PS N P LL PQ+HQPPFPP FY+ QHSQ F G GR YDQSS FKGLSGPLPSDV MEL+NVLN L+GTKESIKGAK+WFMQRSPFAPALAEALRDRV++VDDSERQLHI++L+NDILFD LQRR N HDL NEALAF+PVLGS+LARI+HNPQNKEENQ RLQK+LQFWASKEVYD DTIR LE+EM GG P G +D S+ S D ST +GLP NH+ L WQ+DKQ N SD+E + Q+P + MP Q FL NS P G F G++P+ SS QP N Q+ LLP + T+N GEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPT+IPPS+ SPSE+LERVSKFF+EIGEVNPSEGP+ DDD ER+SPVRKGG CIPPPPNLQVD ETGT DGSVERKPG S SGRLGLGATANPNE SQYDDVYSSYRKQRSTNYH+SMSAR++TT+
Sbjct: 1 MDRQAHDYAAAM-AFAQQQQAANIQQQQQFGFHPQHQQFPPSAHGPPFLSPHPSLQQYPFPRHMQQPHQLHPHP---HLLH-----QPPPAFPPHMPPHLVPSSLLGPYDSPPPPSAPPSDPELQKCIDKLVEYTAKNGPEFEAMIREKQQDNPVYSFLFGGEGHNYYRYKLWLSTRPPGGPYNPPFPSSSVPTMHPSNPMMNPSSLNAP--------------LLGGPQIHQPPFPPSFYEHHQHSQTFVGH----GRSDYDQSSRPFKGLSGPLPSDVGMELSNVLNNLSGTKESIKGAKIWFMQRSPFAPALAEALRDRVFSVDDSERQLHIIYLANDILFD-----------------------------SLQRRINPHDLDNEALAFKPVLGSMLARIFHNPQNKEENQLRLQKILQFWASKEVYDHDTIRALENEMAGGPPMKLSPGS-LKDLSAASTDPST-AGLPQHAPNHSALQWQADKQGLVPNLSDKEHPDKQLPPIVGMPSSLAAQPFLPNSVPTGPFTGSLPIPSSIQPVNQQA---LLPTSSTANTGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTVIPPSSVSPSEVLERVSKFFKEIGEVNPSEGPMKGSGDSKDDDDDYYEERESPVRKGGACIPPPPNLQVDSETGTFADGSVERKPGTSTGSGRLGLGATANPNEVSQYDDVYSSYRKQRSTNYHSSMSARASTTS 674
BLAST of DCAR_027476 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P5XUG8 ((uncharacterized protein LOC111286246 {ECO:0000313|RefSeq:XP_022731858.1}))
HSP 1 Score: 825.083 bits (2130), Expect = 0.000e+0
Identity = 470/728 (64.56%), Postives = 537/728 (73.76%), Query Frame = 0
Match: A0A6P5XUG8 ((uncharacterized protein LOC111286246 {ECO:0000313|RefSeq:XP_022731858.1}))
HSP 1 Score: 825.083 bits (2130), Expect = 0.000e+0
Identity = 470/728 (64.56%), Postives = 537/728 (73.76%), Query Frame = 0
Query: 1 MDRQPHDYSAMAFA---QQQQQAANIQQQQQQFGFHPQHQQFPPSVHGPPFIQPHPSMQPYPFHHMQQGQLHPHP---PHPHLLHLQQQQQLNPSFPPHMPPHIVPSPFRGSYDSPPP-APPPSDPELQKCIDKLVEYAAKHGPEFEAMVRENQKDNPAYRFLFGGDGHNYYRYTLWLATRPPGGPFNPPFPSTSIPVMHP-PNPMVTPSPPNDPKLNASGVGPGATSSLLNVPQMHQPPFPPFYDQQHSQPFPGTMGGPGRQHYDQSSGAFKGLSGPLPSDVAMELNNVLNGLTGTKESIKGAKLWFMQRSPFAPALAEALRDRVYAVDDSERQLHILFLSNDILFDREYTYQVSITIILQDMFEIVTRDMMVIETCLQRRTNTHDLSNEALAFRPVLGSILARIYHNPQNKEENQERLQKVLQFWASKEVYDRDTIRLLESEMIGGVPTNSFTGHPQRDFSSVSADASTFSGLPHQTSNHNVLHWQSDKQ----NFSDQERLENQV-----PSLSAMPQQFLQNSSPAGSFPGAIPMLSSAQPTNLQSAPHLLPAQTSNIGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTMIPPSTTSPSELLERVSKFFREIGEVNPSEGPLNSADDDDEYERDSPVRKGGTCIPPPPNLQVDPETGTLPDGSVERKPGSVSSGRLGLGATANPNEASQYDDVYSSYRKQRSTNYHTSMSARSAT 711
MDR PH Y+A + QQQ+Q ANIQQQ FGFHPQHQQFP +VHGPPFI PHPS PY H QQ QLHPHP P L QQQQQ PSFP H+PPH+V SPF G YDSPPP A PPSD ELQK IDKLVEYA K+GPEFEAM+RE Q DNP Y FLFGG+G+ YYRY LWL+T PPGGP+ P FP +SIP+MHP PNP++ PS LNA + A+ + PQ+HQP FPPFYDQQH P G+ YDQS FKGLSGPLPSDVAMEL +LN L GTKESIK AK+WFMQRSPFAPALAEAL+DRV+A+DDSERQLH+++L+NDILFD LQRR N DL NEALAF+PVLGS+LARIYHNPQN EENQ RLQK+LQFWASKEVYD+D I LESEM+ G PTNSF G P ++ S+ S ++ST +G+ QT+N+NV WQ DKQ N DQE + QV PSL+ QQFL NS P G FPG++P+ S+ QP +LQSA NIGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSP+SPLDIPT+IPPS+ SPSE+L+RVSKFF+EIGEVNP +G +S D+DDEYE + P RKGG CIPPPPNLQVDP++GT DGS ERKPGS GRLGLGATANPNEASQYDDVY+SYRKQRST+YH+SMSAR+AT
Sbjct: 1 MDRPPHSYAAASAMAYSQQQRQPANIQQQ---FGFHPQHQQFPTTVHGPPFIPPHPSQFPYHPHMQQQPQLHPHPSLHPQLLHLQQQQQQQPPPSFPSHLPPHLVSSPFHGLYDSPPPLATPPSDTELQKRIDKLVEYATKNGPEFEAMIREKQHDNPDYSFLFGGEGNGYYRYKLWLSTLPPGGPY-PSFPPSSIPMMHPHPNPVMNPS------LNAPAMSAAASVGAMAAPQLHQPAFPPFYDQQHHHQHPQPFVTHGQPEYDQS---FKGLSGPLPSDVAMELTTILNNLNGTKESIKSAKIWFMQRSPFAPALAEALKDRVFALDDSERQLHVIYLANDILFD-----------------------------SLQRRVNPRDLDNEALAFKPVLGSMLARIYHNPQNNEENQSRLQKILQFWASKEVYDQDAIYALESEMMSGPPTNSFPG-PPKELSAASVESSTPAGILPQTANNNVTLWQPDKQSSIPNVLDQELPDKQVATALLPSLAN--QQFLPNSVPTGGFPGSMPLNSNLQPPSLQSA---------NIGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPLSPLDIPTVIPPSSVSPSEILDRVSKFFKEIGEVNPYQG--SSKDEDDEYEIEPPTRKGGACIPPPPNLQVDPDSGTYADGSAERKPGSSGLGRLGLGATANPNEASQYDDVYTSYRKQRSTSYHSSMSARAAT 672
BLAST of DCAR_027476 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6H2C9 ((Uncharacterized protein {ECO:0000313|EMBL:CCB46480.1}))
HSP 1 Score: 822.387 bits (2123), Expect = 0.000e+0
Identity = 489/730 (66.99%), Postives = 547/730 (74.93%), Query Frame = 0
Match: F6H2C9 ((Uncharacterized protein {ECO:0000313|EMBL:CCB46480.1}))
HSP 1 Score: 822.387 bits (2123), Expect = 0.000e+0
Identity = 489/730 (66.99%), Postives = 547/730 (74.93%), Query Frame = 0
Query: 1 MDRQPHDYSAMAFAQQQQQAANIQQQQQQFGFHPQHQQFPPSVHGPPFIQPHPSMQPYPFH-HM---QQGQLHPHPPHPHLLHLQQQQQLNPSFPPHMPPHIVPSPFRGSYDSPPPAPPPSDP-ELQKCIDKLVEYAAKHGPEFEAMVRENQKDNPAYRFLFGGDGHNYYRYTLWLATRPPGGPFNPPFPSTSIPVMHPP-NPMVTPSPPNDPKLNASGVGPGATSSLLNVPQMHQ-PPFPPFYDQQHSQPFPGTMGGPGRQHYDQSSGAFKGLSGPLPSDVAMELNNVLNGLTGTKESIKGAKLWFMQRSPFAPALAEALRDRVYAVDDSERQLHILFLSNDILFDREYTYQVSITIILQDMFEIVTRDMMVIETCLQRRTNTHDLSNEALAFRPVLGSILARIYHNPQNKEENQERLQKVLQFWASKEVYDRDTIRLLESEMIGGVPTNSFTGHPQRDFSSVSADASTFSGLPHQTSNHNVLHWQSDKQN----FSDQERLENQVPSLSAMP-----QQFLQNSSPAGSFPGAIPMLSSAQPTNLQSAPHLLPAQTSNIGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTMIPPSTTSPSELLERVSKFFREIGEVNPSEGPL---NSADDDDEYERDSPVRKGGTCIPPPPNLQVDPETGTLPDGSVERKPGSVSSGRLGLGATANPNEASQYDDVYSSYRKQRSTNYHTSMSARSAT 711
MDRQ HDY+A QQQQ A QQQQ FGFHPQHQ FPPSVHGPPF+ PHPS+Q YPFH HM Q PPHPHLLHLQQQQQ +FPPH+P H+VPSPF G Y+S P P EL K IDKLVEYAAK+GPEFE M+RE Q+DNPAY FLFGG+GHNYYRY LWL+TR GGPFN PFP +SIP MH P NPM+ PS LNA GA++S+L PQMHQ P + PFYDQQ Q +G GR +D SS +FKGLSGPLPSDVAMEL+NVLN LTGTKESIKGAK+WFMQRSPFAPALAEALRDRV+A+DDSERQLHI++L+NDILFD LQRR N H+L NEALAF+PVLGS+LARIYHNPQNKEENQ RLQK+LQFWASKEVYD DTI LE +MIGG P NSF+G ++ S+V AD S SGLP QT++HNV WQ DK + +QE+ + Q+PSL+AMP QQFL N+ PAG F G++P+ SS QP N Q A HL A + +GEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPT+IP S SPSE+LERVSKFF+EIGEVNPSEGP+ +S D+DDEYERD PVRKGG CIPPPPNLQVDPETGT DGSVERKPGS S RLGLGATANPNE SQYDDVYSSYRKQRST YH+SMSAR T
Sbjct: 1 MDRQAHDYAAAMAFAQQQQQAANVQQQQPFGFHPQHQPFPPSVHGPPFLPPHPSLQQYPFHRHMPPQSQQLHPHPPPHPHLLHLQQQQQPPSAFPPHLPSHLVPSPFHGPYESGSPPSAPPSDPELHKRIDKLVEYAAKNGPEFEVMIREKQQDNPAYSFLFGGEGHNYYRYKLWLSTRSSGGPFNSPFPPSSIPTMHSPMNPMMNPS------LNAPPAAAGASASMLGTPQMHQQPSYLPFYDQQQQQHPQPFLGH-GRPDFDPSSKSFKGLSGPLPSDVAMELSNVLNNLTGTKESIKGAKIWFMQRSPFAPALAEALRDRVFALDDSERQLHIIYLANDILFD-----------------------------SLQRRINPHELDNEALAFKPVLGSMLARIYHNPQNKEENQSRLQKILQFWASKEVYDHDTIYGLEGDMIGGPPGNSFSGL-LKELSAVPADPSAVSGLP-QTAHHNVPQWQPDKPSSMPSLLEQEQPDKQMPSLAAMPPSLATQQFLPNAVPAGPFLGSMPIPSSVQPANQQPALHLPTA--TGLGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTVIPLSNVSPSEILERVSKFFKEIGEVNPSEGPMEPSDSKDEDDEYERDPPVRKGGACIPPPPNLQVDPETGTYSDGSVERKPGSSGSARLGLGATANPNEVSQYDDVYSSYRKQRSTTYHSSMSARVGT 690
BLAST of DCAR_027476 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438J0J5 ((Uncharacterized protein {ECO:0000313|EMBL:RVX02454.1}))
HSP 1 Score: 817.379 bits (2110), Expect = 0.000e+0
Identity = 477/741 (64.37%), Postives = 537/741 (72.47%), Query Frame = 0
Match: A0A438J0J5 ((Uncharacterized protein {ECO:0000313|EMBL:RVX02454.1}))
HSP 1 Score: 817.379 bits (2110), Expect = 0.000e+0
Identity = 477/741 (64.37%), Postives = 537/741 (72.47%), Query Frame = 0
Query: 1 MDRQPHDYSAMAFAQQQQQAANIQQQQQQFGFHPQHQQFPPSVHGPPFIQPHPSMQPYPFH-HMQQGQLHPHPPHPHLLHLQQQQQLNP--SFPPHMPPHIVPSPFRGSYDSPPPAPPPSDP-ELQKCIDKLVEYAAKHGPEFEAMVRENQKDNPAYRFLFGGDGHNYYRYTLWLATRPPGGPFNPPFPSTSIPVMHPP-NPMVTPSPPNDPKLNASGVGPGATSS-LLNVPQMHQPPFPPFYDQQHSQPFPGT-MGGPGRQHYDQSSGAFKGLSGPLPSDVAMELNNVLNGLTGTKESIKGAKLWFMQRSPFAPALAEALRDRVYAVDDSERQLHILFLSNDILFDREYTYQVSITIILQDMFEIVTRDMMVIETCLQRRTNTHDLSNEALAFRPVLGSILARIYHNPQNKEENQERLQKVLQFWASKEVYDRDTIRLLESEMIGGVPTNSFTGHPQRDFSSVSADASTFSGLPHQT--------SNHNV------LHWQSDKQNFSDQERLENQVPSLSAMP-----QQFLQNSSPAGSFPGAIPMLSSAQPTNLQSAPHLLPAQTSNIGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTMIPPSTTSPSELLERVSKFFREIGEVNPSEGPL---NSADDDDEYERDSPVRKGGTCIPPPPNLQVDPETGTLPDGSVERKPGSVSSGRLGLGATANPNEASQYDDVYSSYRKQRSTNYHTSMSARSATT 712
MDRQ HDY+A QQQQ A QQQQ FGFHPQHQQFPPSVHGPPF+ PHPS+Q YPFH HM P PH L QQQ +FPPH+P H+VPSPF G ++S PP P EL K IDKLVEYAAK+GPEFE M+RE Q+DNPAY FLFGG+GHNYYRY LWL+TR GGPFN PFP +SIP+MH P NPM+ PS LNA S+ +L PQMHQPP+ PFYDQQ Q G GR +D SS +FKGLSGPLPSDVAMEL+NVLN LTGTKESIKGAK+WFMQRSPFAPALAEALRDRV+AVDDSERQLHI++L+NDILFD LQRR N H+L NEALAF+PVLGS+LARIYHNPQNKEENQ RLQK+LQFWASKEVYD DTI L+ EMIGG P+NSF+G P ++ S+V D S S T + H + L Q Q +QE+ + Q+PSL+AMP QQFL N+ PAG F G++P+ SS QP N Q A HL A + +GEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPT+IPPS SPSE+LERVSKFF+EIGEVNPSEGP+ +S D+DDEYERDSPVRKGG CIPPPPNLQVDPETGT DGSVERKPGS S RLGLGATANPNE SQYDDVY+SYRKQRSTNYH+SMSAR+ T+
Sbjct: 1 MDRQAHDYAAAMAFAQQQQQAANVQQQQPFGFHPQHQQFPPSVHGPPFLPPHPSLQQYPFHRHMPPQPQLHPHPPPHPHLLHLQQQQQAPSAFPPHLPSHLVPSPFHGPFESGPPPSNPPSDPELHKRIDKLVEYAAKNGPEFEVMIREKQQDNPAYSFLFGGEGHNYYRYKLWLSTRSSGGPFNSPFPPSSIPMMHSPMNPMMNPS------LNAPPAAAAGASASMLGTPQMHQPPYLPFYDQQQQQHQHPQPFLGHGRPDFDPSSKSFKGLSGPLPSDVAMELSNVLNNLTGTKESIKGAKIWFMQRSPFAPALAEALRDRVFAVDDSERQLHIIYLANDILFD-----------------------------SLQRRINPHELDNEALAFKPVLGSMLARIYHNPQNKEENQSRLQKILQFWASKEVYDHDTIYGLDGEMIGGPPSNSFSG-PHKELSAVPVDPSAVSVKCLLTVLFMQDCHNQHTITFRIGSLKSQVVCQVLLEQEQPDKQMPSLAAMPPSLATQQFLPNAVPAGPFLGSMPIPSSVQPANQQPALHLPTA--AGLGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTVIPPSNVSPSEILERVSKFFKEIGEVNPSEGPMEPSDSKDEDDEYERDSPVRKGGACIPPPPNLQVDPETGTYADGSVERKPGSSGSARLGLGATANPNEVSQYDDVYTSYRKQRSTNYHSSMSARAGTS 703
| Match Name | Stats | Description |
|---|---|---|
| A0A5B7AA58 | E-Value: 0.000e+0, PID: 71.39 | (Putative calcium homeostasis endoplasmic reticulu... [more] |
| A0A5B7A9K8 | E-Value: 0.000e+0, PID: 69.49 | (Putative calcium homeostasis endoplasmic reticulu... [more] |
| A0A2R6QAM3 | E-Value: 0.000e+0, PID: 65.30 | (Calcium homeostasis endoplasmic reticulum protein... [more] |
| F6H1T4 | E-Value: 0.000e+0, PID: 66.16 | (Uncharacterized protein {ECO:0000313|EMBL:CCB4615... [more] |
| A0A438DPH7 | E-Value: 0.000e+0, PID: 67.35 | (Calcium homeostasis endoplasmic reticulum protein... [more] |
| A0A2R6PYB8 | E-Value: 0.000e+0, PID: 66.44 | (Calcium homeostasis endoplasmic reticulum protein... [more] |
| A0A7J0DXF5 | E-Value: 0.000e+0, PID: 66.67 | (SWAP (Suppressor-of-White-APricot)/surp RNA-bindi... [more] |
| A0A6P5XUG8 | E-Value: 0.000e+0, PID: 64.56 | (uncharacterized protein LOC111286246 {ECO:0000313... [more] |
| F6H2C9 | E-Value: 0.000e+0, PID: 66.99 | (Uncharacterized protein {ECO:0000313|EMBL:CCB4648... [more] |
| A0A438J0J5 | E-Value: 0.000e+0, PID: 64.37 | (Uncharacterized protein {ECO:0000313|EMBL:RVX0245... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |