XM_017379564.1

Resource Type: 
Polypeptide
Name: 
XM_017379564.1
Identifier: 
XM_017379564.1-protein
Sequence: 
MMDLEFEKICVVDGSPNTVLLCPRQFYKVEREKTNKPHDALSPKQGFSDI
RFRRYSRASCKRSQSKSTVPEGNKVLKRGSVYQSSQEVTMKDLGDVGDRR
KIEFPQGSVNALSIGVVNSLCDSDEDSSSVEHRSSAMSLNSESSTSVTST
SVTSKPCTSKEFFSSSRQPILKREVSLNSFLKISLKSEDGKNQSAKYAER
KEVEASMCNNDPTFSLPRDDSGLKKRDTGSVMQKSLSARPVLPYTHPRLE
SNCSTPGTLFSGLSPTRETSEPLPELKSQRSPLGSVDEHIPIAKVSIKRN
KRLHRSLLPDFSKTSWNTCESQIVKEYSKPPLPCSPAHLHGHLKFKNRHG
MPYFEFLVKSPEDKIIAKTWKVGNALNWLYTFHTSQNKSRAISPNWGIKE
SNKESAMVGQMQVSCLLRSDLNDAGALENSTVTEFVLYDIKQARKDIAAK
KDSFSSLEAAKPLTSVKTNLAGGTCKLHETSDLRKYSDQPKNVFNGGHSP
WEPADLHPNNEIAAIVIQVPLEKRESLKEKRRNQKSNQSYINLHDFEGLD
QRTNCLSQTKVNVVTSSGNHGLPTAECPGPSRLLDRWKSGGGCDCGGWDM
GCPLVTFDNSNRCPEDHSPINNQQPWKLYIQGGKEKSPAFRMTGTKEGEY
EVDFHAQLSTLQAFSICVSILHSTEATDAAKQSRDDKFQQCDSLSGLLDE
DIKYIFENVQDEKKKAPASFVLNPPFSPIARV
Sequence Length: 
732
Sequence Checksum: 
883aca90edb940e13b4b71a70931de59
View location in JBrowse: 
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017379564.1, derives from mRNA, XM_017379564.1.
Loading content
Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017379564.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017379564.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4EY59 ((Uncharacterized protein {ECO:0000313|EMBL:THG21998.1}))

HSP 1 Score: 561.992 bits (1447), Expect = 0.000e+0
Identity = 347/763 (45.48%), Postives = 470/763 (61.60%), Query Frame = 0
 
Query:    2 MDLEFEKICVVDGSPNTVLLCPRQFYKVER-----EKTNKPHDALSPKQGFSDIRFRRYSRASCKRSQSKSTVPEGNKVLKRGSVYQSSQEV-TMKDLGDVGDRRKIEFPQGSVNALSIGVVNSLCDSDEDSSSVEH-RSSAMSLNSESSTSVTSTSVTSKPCTSKEFFSSSRQPILKREVSLNSFLKISLKSEDGKNQSAKYAERKEVEASMCNNDPTFSLPRDDSGLKKRDTGSVMQKSLSARPVLPYTHPRLESNCSTPGTLFSGLSPTRETSEPLPELKSQRSPLGSVDEH---IPIAKVSI--KRNKRLHRSLLPDFSKTSWN-TCESQI-VKEYSKPPLPCSPAHLHGHLKFKNRHGMPYFEFLVKSPEDKIIAKTWKVGNALNWLYTFHTSQNKSRAISPNWGIKESNKESAMVGQMQVSCLLRSDLNDAGALENSTVTEFVLYDIKQARKDIAAKKDSFSSLEAAKPLTSVKTNLAGGTCKLHETSDLRKYSDQPKNVFNGGH------SPWEPADLHPNNEIAAIVIQVPLEKRESLKEKRRNQKSNQSYINLHDFEGLDQRTNCL----SQTKVNVVTSSGNHGLPTAECPGPSRLLDRWKSGGGCDCGGWDMGCPLVTFDNSN-RCPEDHSPINNQQPWKLYIQGGKEKSPAFRMTGTKEGEYEVDFHAQLSTLQAFSICVSILHSTEATDAAKQSRDDKFQQCDSLSGLLDEDIKYIFENVQDEKKK-------APASFVLNPPFSPIARV 732
            M+LEF+K C V GSP TVL  PR+  ++E+     + T   +D  S ++GF +I FRRY  +SCK + S+S   EGN+VL+RGSVYQ+S+EV  M+ +  +  RRKIE      +A S+G+V+SLC S+++SS +E  RSS +S+NS+SST       TS P    E F           VS + FL++       ++ SA+  ER+++       DP      D    + RDT   + KSLSA+  LP +  + ES+ S P +  +  SP ++  +P  + KSQRSPLGS       +P A+++   + N  L +SLL +FS T  +    SQ   K++    + CSPAHLHG LK +N+HG+P+FEF +K PED  +A+TWK  NALNW+YTFH  +  +      WG+K+SNKES+MVGQMQVSC L ++L DAG+ ENS VTEFVLYD+   R+ +AA+ +   S +  KP      +  GGT KL   SD  K   Q K+  + GH       PW   DLHP+ EIAA+VIQVP  KRESLK K  ++KS+Q + NL D   +++R   +    S TKVNVVT SGNH LP++E  GPS LLDRW+ GGGCDCGGWDM CPL  F + N +  ED+  + NQ+P +L++QG KE +PA  MT  +EG Y VDFHAQLSTLQAFSICV+ILHSTEA+ A    RD +  QC+SL   ++E++K + E V  E+K+        P SF LNPPFSPIARV
Sbjct:    5 MELEFDKYCKVGGSPKTVLPSPRRSSRIEKRIVKGKLTCTTNDLFSLEEGFKEINFRRYRSSSCKFNPSRSPGLEGNEVLRRGSVYQNSKEVRKMRKIVAMEGRRKIE--SSGSHAFSMGIVDSLCSSEKNSSLMERKRSSVVSINSDSST-------TSIPMPLIEEFLDLSHHGTDNVVSSDGFLEMPSNLNGKEDHSAENMERQKMCDPKFRCDPDVGPINDGIDFRDRDTALALHKSLSAKLALPLSPSQSESDGSKPSSPKTRFSPIKKMFDPFTKSKSQRSPLGSSASEPGGLPPARLATVGRNNNTLRKSLLNEFSNTMQSPEFGSQFGKKDHCNSAVSCSPAHLHGCLKLENKHGVPFFEFSLKYPEDVFMARTWKADNALNWVYTFHNRRKSNNG----WGLKDSNKESSMVGQMQVSCYLCTELKDAGSFENSMVTEFVLYDVAHGRRSVAARGNPNQSSDVVKPPKVSSQSSVGGTSKLDNVSDQSKLKLQLKHSTDNGHFDKLTPHPWALEDLHPSLEIAAVVIQVPFAKRESLKHKGGDEKSDQPHPNLLDLSAMEERKKGIGDGSSTTKVNVVTPSGNHSLPSSESRGPSPLLDRWRLGGGCDCGGWDMACPLTVFGSPNIQSGEDYLLVENQRPLELFVQGAKENTPALTMTVIEEGRYSVDFHAQLSTLQAFSICVAILHSTEASIAVGHERDKQLLQCNSLRVFIEEEVKDLIEAVTGEEKRKVGKMEEIPPSFKLNPPFSPIARV 754    
BLAST of XM_017379564.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438JJU5 ((Uncharacterized protein {ECO:0000313|EMBL:RVX09207.1}))

HSP 1 Score: 545.428 bits (1404), Expect = 0.000e+0
Identity = 338/766 (44.13%), Postives = 468/766 (61.10%), Query Frame = 0
 
Query:    2 MDLEFEKICVVDGSPNTVLLCPRQFYKV----EREKTNKPHDALSPKQGFSDIRFRRYSRASCKRSQSKSTVPEGNKVLKRGSVYQSSQEV-TMKDLGDVGDRRKIEFPQGSVNALSIGVVNSLCDSDEDSSSVEH-RSSAMSLNSESSTSVTSTSVTSKPCTSKEFFSSSRQPILKREVSLNSFLKISLKSEDGKNQSAKYAERKEVEASMCNNDPTFSLPRDDSGLKKRDTGSVMQKSLSARPVLPYTHPRLESNCS--TPGTLFSGLSPTRETSEPLPELKSQRSPLGSVDEHIPIAK--VSIKRNKRLHRSLLPDFSKTSWNT-CESQIVK-EYSKPPLPCSPAHLHGHLKFKNRHGMPYFEFLVKSPEDKIIAKTWKVGNALNWLYTFHTSQNKSRAISPNWGIKESNKESAMVGQMQVSCLLRSDLNDAGALENSTVTEFVLYDIKQARKDIAAKKDSFSSLEAAKPLTSVKTNLAGGTCKLHETSD----LRKYSDQPKNV--FNGG-HSPWEPADLHPNNEIAAIVIQVPLEKRESLKEKRRNQKSNQSYINLHDFEGLDQRTN---CLSQTKVNVVTSSGNHGLPTAECPGPSRLLDRWKSGGGCDCGGWDMGCPLVTFDNSN-----RCPEDHSPINNQQPWKLYIQGGKEKSPAFRMTGTKEGEYEVDFHAQLSTLQAFSICVSILHSTEATDAAKQSRDDKFQQCDSLSGLLDEDIKYIFENV-QDEKKKAPA-------SFVLNPPFSPIARV 732
            M+L+FEK C +  SP TVL   +++  +     +EK  +  + LS ++ F++I F  +   SCK  + +    EGN  LKRGS+YQSS+EV   K +G V  RRKIE  + S ++    +V+SLC SDE+   +E  RS   SLNS+      + S   KPC+      SS    L R  S + F +I L  ++ +N SA+ AER  +  S    D       D + L +R+T   + KSLSA+  LP++  + ES+ S  +P   F+   P R+  +P  + KSQRSPL SV +   + K   S + NK   +SLL DF+ T+ +    SQ  K E+    +PCSPAHLHGHLK + +HG+P+FEF +K PED ++AKTWKV NA NW+YTFH+ +N+ ++ +  WG+K+SNKE++MVGQMQVSC L S+L D G   NS VTEFVLYDI  ARK I A+++S  S +AA+P       LAG + +L + SD    L+  ++   N   F+     PW PA+LHP+ EIAAIVIQVP EKRESLK +R  + SN+ + +  D   ++Q+      +S  KV VVT+SGNHGLP+ +  GPS LLDRW+ GGGCDCGGWDM CPL+ FDN +      CP   SP    QP +L++QG KE+ PA  +T  +EG+Y VDFHAQLSTLQAFSICV++LHS+EA       ++     C+SL  L++E++K++ E V ++EK+K P         FV NPPFSPIARV
Sbjct:    5 MELDFEKYCSLGLSPRTVLPSNQRYLGIGKRNTKEKPARRSNLLSIEEDFAEISFGDFHSFSCKSIRYRPVGVEGNVELKRGSIYQSSEEVRKKKKMGAVEGRRKIELSRSSDSSFPFRIVDSLCSSDEEDPVLEEKRSPVKSLNSD-----LNASSVRKPCSQVFSLPSSPGHFLTRGGSSDGFSEIGLNLDNRENHSAESAERDSIRDSKFKCDDVVGPQNDSNDLLERETVLTLYKSLSAKVALPHSPSQSESDYSRTSPKARFN---PIRKMFDPFTKSKSQRSPLHSVVKPGGVTKGPASGRNNKTFRKSLLHDFANTTQHVELASQFAKKEFHHYAVPCSPAHLHGHLKLETKHGVPFFEFSLKHPEDVLVAKTWKVNNAFNWVYTFHSIRNRKKSNASGWGLKDSNKETSMVGQMQVSCYLCSELQDGGKFGNSMVTEFVLYDIAHARKSITARENSCHSPQAAEPAKGSNEGLAGQSLELDDVSDDAVKLKCQTNHASNHDDFDAAVPYPWAPANLHPDLEIAAIVIQVPFEKRESLKYRRGEKFSNKVHSDFLDLSMVEQKKKDVLDMSPAKVKVVTASGNHGLPSGDSRGPSSLLDRWRLGGGCDCGGWDMACPLIVFDNPSILRVEDCPLMESP----QPLELFVQGAKERVPALTITRVEEGQYAVDFHAQLSTLQAFSICVAMLHSSEAFSTTGDEKNRHLLHCNSLKMLIEEEVKFLIEAVTEEEKRKVPKLVEGTLPPFVFNPPFSPIARV 758    
BLAST of XM_017379564.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6HUC6 ((Uncharacterized protein {ECO:0000313|EMBL:CCB58349.1}))

HSP 1 Score: 544.273 bits (1401), Expect = 0.000e+0
Identity = 338/766 (44.13%), Postives = 468/766 (61.10%), Query Frame = 0
 
Query:    2 MDLEFEKICVVDGSPNTVLLCPRQFYKV----EREKTNKPHDALSPKQGFSDIRFRRYSRASCKRSQSKSTVPEGNKVLKRGSVYQSSQEV-TMKDLGDVGDRRKIEFPQGSVNALSIGVVNSLCDSDEDSSSVEH-RSSAMSLNSESSTSVTSTSVTSKPCTSKEFFSSSRQPILKREVSLNSFLKISLKSEDGKNQSAKYAERKEVEASMCNNDPTFSLPRDDSGLKKRDTGSVMQKSLSARPVLPYTHPRLESNCS--TPGTLFSGLSPTRETSEPLPELKSQRSPLGSVDEHIPIAK--VSIKRNKRLHRSLLPDFSKTSWNT-CESQIVK-EYSKPPLPCSPAHLHGHLKFKNRHGMPYFEFLVKSPEDKIIAKTWKVGNALNWLYTFHTSQNKSRAISPNWGIKESNKESAMVGQMQVSCLLRSDLNDAGALENSTVTEFVLYDIKQARKDIAAKKDSFSSLEAAKPLTSVKTNLAGGTCKLHETSD----LRKYSDQPKNV--FNGG-HSPWEPADLHPNNEIAAIVIQVPLEKRESLKEKRRNQKSNQSYINLHDFEGLDQRTN---CLSQTKVNVVTSSGNHGLPTAECPGPSRLLDRWKSGGGCDCGGWDMGCPLVTFDNSN-----RCPEDHSPINNQQPWKLYIQGGKEKSPAFRMTGTKEGEYEVDFHAQLSTLQAFSICVSILHSTEATDAAKQSRDDKFQQCDSLSGLLDEDIKYIFENV-QDEKKKAPA-------SFVLNPPFSPIARV 732
            M+L+FEK C +  SP TVL   +++  +     +EK  +  + LS ++ F++I F  +   SCK  + +    EGN  LKRGS+YQSS+EV   K +G V  RRKIE  + S ++    +V+SLC SDE+   +E  RS   SLNS+      + S   KPC+      SS    L R  S + F +I L  ++ +N SA+ AER  +  S    D       D + L +R+T   + KSLSA+  LP++  + ES+ S  +P   F+   P R+  +P  + KSQRSPL SV +   + K   S + NK   +SLL DF+ T+ +    SQ  K E+    +PCSPAHLHGHLK + +HG+P+FEF +K PED ++AKTWKV NA NW+YTFH+ +N+ ++ +  WG+K+SNKE++MVGQMQVSC L S+L D G   NS VTEFVLYDI  ARK I A+++S  S +AA+P       LAG + +L + SD    L+  ++   N   F+     PW PA+LHP+ EIAAIVIQVP EKRESLK +R  + SN+ + +  D   ++Q+      +S  KV VVT+SGNHGLP+ +  GPS LLDRW+ GGGCDCGGWDM CPL+ FDN +      CP   SP    QP +L++QG KE+ PA  +T  +EG+Y VDFHAQLSTLQAFSICV++LHS+EA       ++     C+SL  L++E++K++ E V ++EK+K P         FV NPPFSPIARV
Sbjct:    1 MELDFEKYCSLGLSPRTVLPSNQRYLGIGKRNTKEKPARRSNLLSIEEDFAEISFGDFHSFSCKSIRYRPVGVEGNVELKRGSIYQSSEEVRKKKKMGAVEGRRKIELSRSSDSSFPFRIVDSLCSSDEEDPVLEEKRSPVKSLNSD-----LNASSVRKPCSQVFSLPSSPGHFLTRGGSSDGFSEIGLNLDNRENHSAESAERDSIRDSKFKCDDVVGPQNDSNDLLERETVLTLYKSLSAKVALPHSPSQSESDYSRTSPKARFN---PIRKMFDPFTKSKSQRSPLHSVVKPGGVTKGPASGRNNKTFRKSLLHDFANTTQHVELASQFAKKEFHHYAVPCSPAHLHGHLKLETKHGVPFFEFSLKHPEDVLVAKTWKVNNAFNWVYTFHSIRNRKKSNASGWGLKDSNKETSMVGQMQVSCYLCSELQDGGKFGNSMVTEFVLYDIAHARKSITARENSCHSPQAAEPAKGSNEGLAGQSLELDDVSDDAVKLKCQTNHASNHDDFDAAVPYPWAPANLHPDLEIAAIVIQVPFEKRESLKYRRGEKFSNKVHSDFLDLSMVEQKKKDVLDMSPAKVKVVTASGNHGLPSGDSRGPSSLLDRWRLGGGCDCGGWDMACPLIVFDNPSILRVEDCPLMESP----QPLELFVQGAKERVPALTITRVEEGQYAVDFHAQLSTLQAFSICVAMLHSSEAFSTTGDEKNRHLLHCNSLKMLIEEEVKFLIEAVTEEEKRKVPKLVEGTLPPFVFNPPFSPIARV 754    
BLAST of XM_017379564.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6Q8H0 ((Eukaryotic translation initiation factor 4 gamma 1 like {ECO:0000313|EMBL:PSS04175.1}))

HSP 1 Score: 539.265 bits (1388), Expect = 1.737e-180
Identity = 335/763 (43.91%), Postives = 454/763 (59.50%), Query Frame = 0
 
Query:    2 MDLEFEKICVVDGSPNTVLLCPRQFYKVER-----EKTNKPHDALSPKQGFSDIRFRRYSRASCKRSQSKSTVPEGNKVLKRGSVYQSSQEV--TMKDLGDVGDRRKIEFPQGSVNALSIGVVNSLCDSDEDSSSVEHRSS-AMSLNSESSTSVTSTSVTSKPCTSKEFFSSSRQPILKREVSLNSFLKISLKSEDGKNQSAKYAERKEVEASMCNNDPTFSLPRDDSGLKKRDTGSVMQKSLSARPVLPYTHPRLESNCSTPGTLFSGLSPTRETSEPLPELKSQRSPLG--SVDEHIPIAKVSIKRNKRLHRSLLPDFSKTSWN-TCESQIV-KEYSKPPLPCSPAHLHGHLKFKNRHGMPYFEFLVKSPEDKIIAKTWKVGNALNWLYTFHTSQNKSRAISPNWGIKESNKESAMVGQMQVSCLLRSDLNDAGALENSTVTEFVLYDIKQARKDIAAKKDSFSSLEAAKPLTSVKTNLAGGTCKLHETSDLRKYSDQPKNVFNGGH------SPWEPADLHPNNEIAAIVIQVPLEKRESLKEKRRNQKSNQSYINLHDFEGLDQRTNCLSQ----TKVNVVTSSGNHGLPTAECPGPSRLLDRWKSGGGCDCGGWDMGCPLVTFDNSN-RCPEDHSPINNQQPWKLYIQGGKEKSPAFRMTGTKEGEYEVDFHAQLSTLQAFSICVSILHSTEATDAAKQSRDDKFQQCDSLSGLLDEDIKYIFENV-QDEKKKA--------PASFVLNPPFSPIARV 732
            M+LEF+K C V  SP TVL  PR+  KV +     EKT+   + L  ++GF++I   +Y   SCK   ++++  EGN+ L+RGSVYQSS+EV  T K   + G RRKIE  + S    S+G+V++LC SDED S +E + + AMS NS++        + S  CT     S SR P                       + A+  E +++E      DP      D +GL +RD+   + KSLSA+  LP++  + ES+   P +  S  SP ++  +P  + +SQRSPLG  S    IP    +I+RN  L +SLL DFS TS      SQ   K+     + CSPAHL G LK +N+HG+P+FEF +K PE+  +A+TWK  NALNW YTFH   N+ ++I+  WG+K+  K+S++VGQMQVSC L ++L DAGA  +S VTEFVLYD+  AR+ ++++++   S +  KP      +  GG+C+L          D+PK+     H       PW P  +HP+ EIAA+VIQVP  KRE+LK K  + KS+  + NL D    +QR    S      KVNVVT+SGNH LP  E  GPS LLDRW+ GGGCDCGGWDM CPL  FDN N R  E H P+ N+QP +L++QG KE +PA  MT T+EG Y VDFHAQLSTLQAFSICV+ILH TEA+ A +  RD +  QC+SL  L+ E++K + E V ++E++KA        P SF  NPPFSPIARV
Sbjct:    5 MELEFDKYCRVGSSPKTVLPSPRRLSKVGKRRSIKEKTDCASNLLILEEGFTEINLHQYRSLSCKNIPTRTSGLEGNEALRRGSVYQSSREVRKTTKSEAEEG-RRKIELSESSAINFSLGIVDNLCSSDEDISVMEPKITLAMSPNSDN-------VLASDACTENHLDSHSRDP-----------------------RYAENVEIEKIEDPKFRCDPIVGPINDGNGLWERDSAVALHKSLSAKLALPHSPSQSESDSFRPSSPKSRFSPIKKMFDPFTKSRSQRSPLGPASGSRGIP---SNIRRNNTLRKSLLSDFSNTSLGPDLYSQFAKKDIGNSAVSCSPAHLRGSLKLENKHGVPFFEFSLKFPEEVFVARTWKPDNALNWAYTFHCLHNRRKSIASGWGLKDWKKDSSLVGQMQVSCYLCTELKDAGAFNSSMVTEFVLYDVAHARQSVSSQENPNQSPDIVKPPKVSNQSSVGGSCEL----------DEPKHAIENAHFDLPTSHPWTPMVMHPSLEIAAVVIQVPFGKRENLKHKGGDVKSDHPHPNLLDLSSAEQRKVGASDYSRSAKVNVVTTSGNHSLPCTESRGPSPLLDRWRLGGGCDCGGWDMACPLTVFDNPNARNAEAHPPVENRQPLELFVQGAKENTPALTMTVTEEGRYSVDFHAQLSTLQAFSICVAILHCTEASTAVRWERDRQLLQCNSLRVLIGEEVKNLIEAVTEEEERKASKKMEEIPPTSFKPNPPFSPIARV 723    
BLAST of XM_017379564.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A5BH79 (TFIIS central domain-containing protein {ECO:0000259|PROSITE:PS51321})

HSP 1 Score: 543.888 bits (1400), Expect = 1.440e-179
Identity = 335/762 (43.96%), Postives = 466/762 (61.15%), Query Frame = 0
 
Query:    2 MDLEFEKICVVDGSPNTVLLCPRQFYKV----EREKTNKPHDALSPKQGFSDIRFRRYSRASCKRSQSKSTVPEGNKVLKRGSVYQSSQEV-TMKDLGDVGDRRKIEFPQGSVNALSIGVVNSLCDSDEDSSSVEH-RSSAMSLNSESSTSVTSTSVTSKPCTSKEFFSSSRQPILKREVSLNSFLKISLKSEDGKNQSAKYAERKEVEASMCNNDPTFSLPRDDSGLKKRDTGSVMQKSLSARPVLPYTHPRLESNCS--TPGTLFSGLSPTRETSEPLPELKSQRSPLGSVDEHIPIAK--VSIKRNKRLHRSLLPDFSKTSWNT-CESQIVK-EYSKPPLPCSPAHLHGHLKFKNRHGMPYFEFLVKSPEDKIIAKTWKVGNALNWLYTFHTSQNKSRAISPNWGIKESNKESAMVGQMQVSCLLRSDLNDAGALENSTVTEFVLYDIKQARKDIAAKKDSFSSLEAAKPLTSVKTNLAGGTCKLHETSD----LRKYSDQPKNV--FNGG-HSPWEPADLHPNNEIAAIVIQVPLEKRESLKEKRRNQKSNQSYINLHDFEGLDQRTN---CLSQTKVNVVTSSGNHGLPTAECPGPSRLLDRWKSGGGCDCGGWDMGCPLVTFDNSNRCPEDHSPINNQ-QPWKLYIQGGKEKSPAFRMTGTKEGEYEVDFHAQLSTLQAFSICVSILHSTEATDAAKQSRDDKFQQCDSLSGLLDEDIKYIFENVQDE-KKKAPA-------SFVLNPPFSPIARV 732
            M+L+FEK C +  SP TVL   +++  +     +EK  +  + LS ++ F++I F  +   SCK  + +    EGN  LKRGS+YQSS+EV   K +G V  RRKIE  + S ++    +V+SLC SDE+   +E  RS   SLNS+      + S   KPC+      SS    L R  S + F +I L  ++ +N SA+ AER  +  S    D       D + L +R+T   + KSLSA+  LP++  + ES+ S  +P   F+   P R+  +P  + KSQRSPL SV +   + K   S + NK   +SLL DF+ T+ +    SQ  K E+    +PCSPAHLHGHLK + +HG+P+FEF +K PED ++AKTWKV NA NW+YTFH+ +N+ ++ +  WG+K+SNKE++MVGQMQVSC L S+L D G   NS VTEFVLYDI  ARK I A+++S  S +AA+P       LAG + +L + SD    L+  ++   N   F+     PW PA+LHP+ EIAAIVIQVP EKRESLK +R  + SN+ + +  D   ++Q+      +S  KV VVT+SGNHGLP+ +  GPS LLDRW+ GGGCDCGGWDM CPL+ FDN +    +  P+    QP +L++QG KE+ PA  +T  +EG+Y VDFHAQLSTLQAFSICV++LHS+EA       ++     C+SL  L++E++K++ E V +E K+K P         FV NPPFSPIARV
Sbjct:  184 MELDFEKYCSLGLSPRTVLPSNQRYLGIGKRNTKEKPARRSNLLSIEEDFAEISFGDFHSFSCKSIRYRPVGVEGNVELKRGSIYQSSEEVRKKKKMGAVEGRRKIELSRSSDSSFPFRIVDSLCSSDEEDPVLEEKRSPVKSLNSD-----LNASSVRKPCSQVFSLPSSPGHFLTRGGSSDGFFEIGLNLDNRENHSAESAERDSIRDSKFKCDDVVGPQNDSNDLLERETVLTLYKSLSAKVALPHSPSQSESDYSRTSPKARFN---PIRKMFDPFTKSKSQRSPLHSVVKPGGVTKGPASGRNNKTFRKSLLHDFANTTQHVELASQFAKKEFHHYAVPCSPAHLHGHLKLETKHGVPFFEFSLKHPEDVLVAKTWKVNNAFNWVYTFHSIRNRKKSNASGWGLKDSNKETSMVGQMQVSCYLCSELQDGGKFGNSMVTEFVLYDIAHARKSITARENSCHSPQAAEPAKGSNEGLAGQSLELDDVSDDAVKLKCQTNHASNHDDFDAAVPYPWAPANLHPDLEIAAIVIQVPFEKRESLKYRRGEKFSNKVHSDFLDLSMVEQKKKDVLDMSPAKVKVVTASGNHGLPSGDSRGPSSLLDRWRLGGGCDCGGWDMACPLIVFDNPSILXVEDCPLMEXPQPLELFVQGAKERVPALTITRVEEGQYAVDFHAQLSTLQAFSICVAMLHSSEAFSTTGDEKNRHLLHCNSLKMLIEEEVKFLIEAVTEEXKRKVPKLVEGTLPPFVFNPPFSPIARV 937    
BLAST of XM_017379564.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7BGA7 ((Uncharacterized protein {ECO:0000313|EMBL:MPA67645.1}) (Fragment))

HSP 1 Score: 514.612 bits (1324), Expect = 2.767e-172
Identity = 309/627 (49.28%), Postives = 406/627 (64.75%), Query Frame = 0
 
Query:  130 VEH-RSSAMSLNSESSTSVTSTSVTSKPCTSKEFFSSSRQPILKREVSLNSFLKISLKSEDGKNQSAKYAERKEVEASMCNNDPTFSLPRDDSGLKKRDTGSVMQKSLSARPVLPYTHPRLESNCSTPGTLFSGLSPTRETSEPLPELKSQRSPLGSVDE--HIPIAKV-SIKRNKRLHRSLLPDFSKTSWNT-CESQIV-KEYSKPPLPCSPAHLHGHLKFKNRHGMPYFEFLVKSPEDKIIAKTWKVGNALNWLYTFHTSQNKSRAISPNWGIKESNKESAMVGQMQVSCLLRSDLNDAGALENSTVTEFVLYDIKQARKDIAAKKDSFSSLEAAKPLTSVKTNLAGGTCKLHETSDLRKYSDQPKNVFNGGH-----SPWEPADLHPNNEIAAIVIQVPLEKRESLKEKRRNQKSNQSYINLHDFEGLDQR----TNCLSQTKVNVVTSSGNHGLPTAECPGPSRLLDRWKSGGGCDCGGWDMGCPLVTFDNSN-RCPEDHSPINNQQPWKLYIQGGKEKSPAFRMTGTKEGEYEVDFHAQLSTLQAFSICVSILHSTEATDAAKQSRDDKFQQCDSLSGLLDEDIKYIFENV-QDEKKKA-------PASFVLNPPFSPIARV 732
            +EH RSS MSLNS+ +T+  S    ++PC S+ F   S        VS N F +IS    + +NQSA+  ER+ +E      DP      D + L++RDT   + KSLSA+  LP++  + E NCS   +  +  SP R+  +P  + KSQRSPLGSV+E   +  A V SI+RNK   +SLL DFS TS ++   SQ V K+     +PCSPAHLHG LK + +HG+P+FEF +K PED ++AKTWK  N L+W+YTFH+ QN+ ++ +  WG K+S KES+MVGQMQVSC L ++L DAG  +NS VTEFVLYDI  ARK +AA++    S +  K       +L   T +L E SD  K   QPK+  + GH      PW PADLHPN E+AAIVIQ+P EK E+LK KR +  S+Q + NL D    +QR    ++CLS  KVNVVT SGNH LP++E  GPS LLDRW+ GGGCDCGGWDM CPL+ F N N +  EDH  + NQQ  +L+ QG KE +PA  +T  +EG Y VDFHAQLSTLQAFSICV+ILHSTEA+   +Q RD +  QC+S+   ++E++KY+ E V ++EK+KA       P SFVL+PPFSPI+RV
Sbjct:    2 MEHTRSSVMSLNSDLNTTSVSKR-HAEPC-SQVFLDLSFHHGRDSVVSSNCFSEISQNLNNRENQSAENVERETIEDPKFRCDPIVVPLNDGNVLQERDTALTLHKSLSAKLALPHSPSQSEINCSRASSPKARFSPIRKMFDPFTKSKSQRSPLGSVNEPGELTAAGVASIRRNKTFRKSLLHDFSNTSQHSEIGSQFVNKDPHYSAVPCSPAHLHGRLKLEKKHGVPFFEFSLKFPEDLLVAKTWKAENTLHWVYTFHSVQNRRKSNASGWGWKDSKKESSMVGQMQVSCYLCTELKDAGLFDNSMVTEFVLYDIAHARKSVAAQEIYNHSPDVVKHPKGSNESLISRTRELDEVSDQLKLKLQPKDAHDNGHFDSSTHPWAPADLHPNLEVAAIVIQMPFEKGENLKSKRGDVNSDQPHPNLLDLSVAEQRKKRISDCLSPAKVNVVTPSGNHSLPSSESRGPSPLLDRWRLGGGCDCGGWDMACPLIVFGNPNIQSAEDHPLMENQQRLELFAQGAKENTPALTITVIEEGLYAVDFHAQLSTLQAFSICVAILHSTEASITLEQERDKQLLQCNSMRVFIEEEVKYLIEEVTEEEKRKASQKMEEIPPSFVLSPPFSPISRV 626    
BLAST of XM_017379564.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0DKJ7 ((Bromo-adjacent domain protein, putative {ECO:0000313|EMBL:GFS37137.1}))

HSP 1 Score: 514.227 bits (1323), Expect = 1.353e-170
Identity = 329/763 (43.12%), Postives = 448/763 (58.72%), Query Frame = 0
 
Query:    2 MDLEFEKICVVDGSPNTVLLCPRQFYKVER-----EKTNKPHDALSPKQGFSDIRFRRYSRASCKRSQSKSTVPEGNKVLKRGSVYQSSQEV--TMKDLGDVGDRRKIEFPQGSVNALSIGVVNSLCDSDEDSSSVEHRSSA-MSLNSESSTSVTSTSVTSKPCTSKEFFSSSRQPILKREVSLNSFLKISLKSEDGKNQSAKYAERKEVEASMCNNDPTFSLPRDDSGLKKRDTGSVMQKSLSARPVLPYTHPRLESNCSTPGTLFSGLSPTRETSEPLPELKSQRSPLGSV--DEHIPIAKVSIKRNKRLHRSLLPDFSKTSWN-TCESQIV-KEYSKPPLPCSPAHLHGHLKFKNRHGMPYFEFLVKSPEDKIIAKTWKVGNALNWLYTFHTSQNKSRAISPNWGIKESNKESAMVGQMQVSCLLRSDLNDAGALENSTVTEFVLYDIKQARKDIAAKKDSFSSLEAAKPLTSVKTNLAGGTCKLHETSDLRKYSDQPKNVFNGGH------SPWEPADLHPNNEIAAIVIQVPLEKRESLKEKRRNQKSNQSYINLHDFEGLDQRTNCLSQ----TKVNVVTSSGNHGLPTAECPGPSRLLDRWKSGGGCDCGGWDMGCPLVTFDNSN-RCPEDHSPINNQQPWKLYIQGGKEKSPAFRMTGTKEGEYEVDFHAQLSTLQAFSICVSILHSTEATDAAKQSRDDKFQQCDSLSGLLDEDIKYIFENV-QDEKKKAPASF--------VLNPPFSPIARV 732
            M+LEF+K C V  SP TVL  P++  KV +     EKT+   + L  ++GF++I   +Y   SCK   ++++  EGN+ L+RGSVYQSS+EV  T K   + G RRKIE  +      S+G+V++LC SDED S +E +    MS NS++        + S   T     S SR P                       + A+  E +++E      DP      D +GL +RD+   + KSLSA+  LP++  + ES+   P +  S  SP ++  +P  + KSQRSPLG       IP    +I+RN  L +SLL DFS TS      SQ V K+     + CSPAHL G LK +N+HG+P+FEF +K PE+  +A+TWK  NALNW YTFH   N+ ++I+  WG+K+  K+S++VGQMQVSC L ++L DAGA  +S VTEFVLYD+  AR+ ++++++   S +  KP      +  GG+C+L          D+PK+     H       PW P  +HP+ EIAA+VIQVP EKRE+LK K  + KS+  + NL D    +QR    S      KVNVVT+SGNH LP  E  GPS LLDRW+ GGGCDCGGWDM CPL  FDN N R  E H P+ N+QP +L++QG KE +PA  MT T+EG Y VDFHAQLSTLQAFSICV+ILH TEA+ A +  RD +  QC+SL  ++ E++K + E V ++E++KA              NPPFSPIARV
Sbjct:   19 MELEFDKYCRVGASPKTVLPSPQRLSKVGKRRSIKEKTDCASNLLILEEGFTEINLHQYRSLSCKNIPTRTSGLEGNEALRRGSVYQSSREVRKTTKSEAEEG-RRKIELSESRAINFSLGIVDNLCSSDEDISVMEPKIPLDMSPNSDN-------VLASDMRTENHLDSHSRDP-----------------------RYAENVEIEKIEDPKFRCDPIVGPINDGNGLWERDSAVALHKSLSAKLALPHSPSQSESDSFRPNSPKSRFSPIKKMFDPFTKSKSQRSPLGPACGSRGIP---SNIRRNNTLRKSLLSDFSNTSLGPDLYSQFVKKDIGNSAVSCSPAHLRGSLKLENKHGVPFFEFSLKFPEEVFVARTWKPDNALNWAYTFHCLHNRRKSIASGWGLKDWKKDSSLVGQMQVSCYLCTELKDAGAFNSSMVTEFVLYDVAHARQSVSSQENPNQSPDIVKPPKVSNQSSVGGSCEL----------DEPKHAIENAHFDLPTSHPWTPTVMHPSLEIAAVVIQVPFEKRENLKHKGGDVKSDHPHPNLLDLSSAEQRKVGASDYSRSAKVNVVTTSGNHSLPCTESRGPSPLLDRWRLGGGCDCGGWDMACPLTVFDNPNARNAEAHPPVENRQPLELFVQGAKENTPALTMTVTEEGRYSVDFHAQLSTLQAFSICVAILHCTEASTALRWERDRQLLQCNSLRVVIGEEVKNLIEAVTEEEERKASKKMEEIPPPSFKPNPPFSPIARV 737    
BLAST of XM_017379564.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1Q3AQL6 ((DUF3527 domain-containing protein {ECO:0000313|EMBL:GAV57954.1}))

HSP 1 Score: 511.531 bits (1316), Expect = 3.885e-169
Identity = 324/761 (42.58%), Postives = 440/761 (57.82%), Query Frame = 0
 
Query:    2 MDLEFEKICVVDGSPNTVLLCPRQFYKVERE--KTNKPH--DALSPKQGFSDIRFRRYSRASCKRSQSKSTVPEGNKVLKRGSVYQSSQEVT-MKDLGDVGDRRKIEFPQGSVNALSIGVVNSLCDSDEDSSSVEHRSSAMSLNSESSTSVTSTSVTS---KPCTSKEFFSSSRQPILKREVSLNSFLKISLKSEDGKNQSAKYAERKEVEASMCNNDPTFSLPRDDSGLKKRDTGSVMQKSLSARPVLPYTHPRLESNCSTPGTLFSGLSPTRETSEPLPELKSQRSPLGSVDEHIPIAKVSIKRNKRLHRSLLPDFSKTSWNTC--ESQIVKEYSKPPLPCSPAHLHGHLKFKNRHGMPYFEFLVKSPEDKIIAKTWKVGNALNWLYTFHTSQNKSRAISPNWGIKESNKESAMVGQMQVSCLLRSDLNDAGALENSTVTEFVLYDIKQARKDIAAKKDSFSSLEAAKPLTSVKTNLAGGTCKLHETSDLRKYSDQPKNVFNG---------GHSPWEPADLHPNNEIAAIVIQVPLEKRESLKEKRRNQKSNQSYINLHDFEGLDQRTNCLSQT---KVNVVTSSGNHGLPTAECPGPSRLLDRWKSGGGCDCGGWDMGCPLVTFDN-SNRCPEDHSPINNQQPWKLYIQGGKEKSPAFRMTGTKEGEYEVDFHAQLSTLQAFSICVSILHSTEATDAAKQSRDDKFQQCDSLSGLLDEDIKYIFENVQDEKKKA-------PASFVLNPPFSPIARV 732
            M+   EK   VD SPNTVL  PR    +E+   + N  H  D LS K GF++I FRRY  +SCK + S+S   E N  LKRGS+YQSS+EVT MK  G    R KIE    S  + S  + +SLC  DE++   ++R    S+NS    S+T TS+     +PC S                  N F++I L S+  +  S +  E+  ++  + N++       D +GL +RDT   +QKS S +  +PY     +S+CS+  +  +  SP R+  +P  + KS RSPLG V E   +  V+++  + + +SLL DFS +  N+     +I K+     + CSP HLHG LK  N+  +P+FEF + S E+ ++ + WK  NA NW+YTF +  +K++  +  WG  + NKES+MVGQMQVSC L S+L  +G L NS VTEFVLYDI  AR+ I++K+ S  S +  K        L GGT +L +  D  K     K+  +             PW  ADLHPN EIAA VIQVP EKRESLK KR ++  +  + NL     ++ R   L      KV VV  +GNHGLPTAE   PS LLDRW+ GG CDCGGWDMGCPLV F N S  C ED   + NQQP +L+++G KE +PAF M+  +EG+Y VDFHAQLSTLQAFSICV+ILH  EA+ A  Q R  + +QC SL  L++E++K++ E V +E KK        P S+V+NPPFSPI+RV
Sbjct:   33 MEFNNEKKGTVDLSPNTVLPSPRHRLNIEKRYSRGNLKHKDDILSIKDGFTEISFRRYRSSSCKNTTSRSVRREENVELKRGSIYQSSREVTKMKKTGSDEAREKIELSCTSDTSYSFTIHDSLCSLDEENQ--QNRIPGTSVNS----SLTPTSIGKPYVEPCLS------------------NGFIEICLNSDKREKLSGEPLEKFLLKDLVFNSNEVIGPQNDGNGLHERDTVLRLQKSHSDKVEMPYFPSPSDSDCSSRTSSKTRFSPIRKMFDPFMKSKSLRSPLGYVAE---LDGVNMRTKRTIRKSLLHDFSPSRQNSVFNSQRINKDQHHSVVECSPIHLHGCLKLINKLEVPFFEFSLNSAEEVLVGRIWKADNAFNWVYTFQSIGSKNKTNASGWGSSDINKESSMVGQMQVSCYLCSELK-SGVLYNSMVTEFVLYDIAHARQSISSKECSDCSPDLHKSPPDSDPGLVGGTPELKDGPDAAKPKQHLKHAADHIAFKPSKKQNPYPWASADLHPNLEIAATVIQVPFEKRESLKHKRGDKVIDIVHSNLLKLPIVEPRKKNLPDNLCEKVKVVIPTGNHGLPTAENRAPSTLLDRWRLGGCCDCGGWDMGCPLVVFGNPSIPCAEDEPLVANQQPLELFLKGTKENTPAFTMSIIEEGQYAVDFHAQLSTLQAFSICVAILHGKEASTAG-QERGIQLKQCTSLKELIEEEVKFLIEAVTEEGKKVNKKTEEIPRSYVINPPFSPISRV 764    
BLAST of XM_017379564.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6A4L9T3 ((Uncharacterized protein {ECO:0000313|EMBL:KAE9452059.1}) (Fragment))

HSP 1 Score: 503.442 bits (1295), Expect = 1.040e-166
Identity = 313/762 (41.08%), Postives = 416/762 (54.59%), Query Frame = 0
 
Query:    2 MDLEFEKICVVDGSPNTVLLCPRQFYKVERE----KTNKPHDALSPKQGFSDIRFRRYSRASCKRSQSKSTVPEGNKVLKRGSVYQSSQEVTMKDLG-DVGDRRKIEFPQGSVNALSIGVVNSLCDSDEDSSSVEHRSSAMSLNSESSTSVTSTSVTSKPCTSKEFFSSSRQPILKREVSLNSFLKISLKSEDGKNQSAKYAERKEVEASMCNNDPTFSLPRDDSGLKKRDTGSVMQKSLSARPVLPYTHPRLESNCSTPGTLFSGLSPTRETSEPLPELKSQRSPLGSVDEHI---PIAKVSIKRNKRLHRSLLPDFSKTSWNT--CESQIVKEYSKPPLPCSPAHLHGHLKFKNRHGMPYFEFLVKSPEDKIIAKTWKVGNALNWLYTFHTSQNKSRAISPNWGIKESNKESAMVGQMQVSCLLRSDLNDAGALENSTVTEFVLYDIKQARKDIAAKKDSFSSLEAAKPLTSVKTNLAGGTCKLHETSDLRKYSDQPKNVFNGGH------SPWEPADLHPNNEIAAIVIQVPLEKRESLKEKRRNQKSNQSYINLHDF-------EGLDQRTNCLSQTKVNVVTSSGNHGLPTAECPGPSRLLDRWKSGGGCDCGGWDMGCPLVTFDNSNRCPEDHSPINNQQPWKLYIQGGKEKSPAFRMTGTKEGEYEVDFHAQLSTLQAFSICVSILHSTEATDAAKQSRDDKFQQCDSLSGLLDEDIKYIFENVQDEKKK--------APASFVLNPPFSPIARV 732
            M+LEFEK C V GSP TVL  PR   K+E+     K N P+  L+ +    +I FRRY  +SCK + S ++  E  +VLKRGSVYQSS+EV M + G DV  R KIE           G+ +SLC  +ED+                                               VS +  L+ +  S   +  SA+  ER ++E      DP      D +GL++R+      KSLS++  +P+     E + S      S  SP R+  +P  + KSQRSPLGS    I   P     IKR++ L +SLL DFS  S +       + K+ S   +  SPAHLHG LK +N+ G+P+FEF  K PED  + + WK  NALNW+YTFH   N+ ++ +  WG+K+ NKES+++GQMQVSC L ++L D G  +N  VTEFVLYD+ +AR+  A + +   S + AKP      N   GT +L + +D    + Q K+     H       PW P DLHP  EIAAIVIQVP  KRESLK K  +  S+Q + NL D        EG+    +C   TKVNVVT+SGNH L   +  GPS LLDR++ GGGC+CGGWDMGCPL  F N    P   S   NQQP +L+IQG KE +PA  M   +EG Y VDFHA+LS+LQAFSICV++LH TEA+ A +  RD +  QC+ L   ++E++K I E V  E+++         P SF  NPPFSPIARV
Sbjct:   10 MELEFEKYCKVGGSPKTVLPPPRHPSKIEKXSSKGKXNCPNGLLTLEDNIKEINFRRYRSSSCKNTPSXTSGVERKEVLKRGSVYQSSREVRMMNKGEDVDCRTKIELSGSHAXTFPSGIFDSLCAINEDNV----------------------------------------------VSSDVLLETAWDSNSREQISAENVERGKIEDPKFRCDPIVGPTNDGNGLEEREGSLTFHKSLSSKLAVPHPPSPAEGDSSK-----SRFSPFRKMFDPFTKSKSQRSPLGSTGGSIGLPPARPPIIKRSQTLQKSLLNDFSNVSQSVELNPPSVKKDISNSAVSRSPAHLHGFLKLENKQGVPFFEFTSKFPEDVFVTRRWKAENALNWVYTFHNLHNRRKSNASGWGLKDLNKESSIMGQMQVSCYLCTELRDVGDFDNYMVTEFVLYDVARARQSDAVQGNLNXSPDVAKPPKVSNPNSFSGTRELDDVADESNLNLQQKHATKSTHFDSSTPRPWVPTDLHPGLEIAAIVIQVPFGKRESLKNKGGDAMSDQLHRNLLDLSSHKXKKEGI---PDCSRPTKVNVVTTSGNHSLGGNDSCGPSPLLDRFRLGGGCECGGWDMGCPLTVFGN----PGIQS-AENQQPLELFIQGVKEYTPALTMKVIEEGRYSVDFHAKLSSLQAFSICVAMLHCTEASSAVRWERDKQSLQCNPLRVFIEEEVKNIIEAVAKEEERKVVKKMEEIPPSFKPNPPFSPIARV 712    
BLAST of XM_017379564.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6TTA0 ((uncharacterized protein LOC113703879 {ECO:0000313|RefSeq:XP_027081172.1, ECO:0000313|RefSeq:XP_027081173.1}))

HSP 1 Score: 501.901 bits (1291), Expect = 1.816e-165
Identity = 318/760 (41.84%), Postives = 450/760 (59.21%), Query Frame = 0
 
Query:    2 MDLEFEKICVVDGSPNTVLLCPRQFYKVEREKTN----KPHDALSPKQGFSDIRFRRYSRASCKRSQSKSTVPEGNKVLKRGSVYQSSQEV-TMKDLGDVGDRRKIEFPQGSVNALSIGVVNSLCDSDEDSSSVEH-RSSAMSLNSESSTSVTSTSVTSKPCTSKEFFSSSRQPILKREVSLNSFLKISLKSEDGKNQSAKYAERKEVEASMCNNDPTFSLPRDDSGLKKRDTGSVMQKSLSARPVLPYTHPRLESNCSTPGTLFSGLSPTRETSEPLPELKSQRSPLGSVDEHI---PIAKVSIKRNKRLHRSLLPDFSKTSWNT-CESQIVKEYSKPPLPCSPAHLHGHLKFKNRHGMPYFEFLVKSPEDKIIAKTWKVGNALNWLYTFHTSQNKSRAISPNWGIKESNKESAMVGQMQVSCLLRSDLNDAGALENSTVTEFVLYDIKQARKDIAAKKDSFSSLEAAKPLTSVKTNLAGGTCKLHETSDLRKYSDQPKNVFNGGHS------PWEPADLHPNNEIAAIVIQVPLEKRESLKEKRRNQKSNQSYINLHDFEGLDQRT----NCLSQTKVNVVTSSGNHGLPTAECPGPSRLLDRWKSGGGCDCGGWDMGCPLVTFDNSN-RCPEDHSPINNQQPWKLYIQGGKEKSPAFRMTGTKEGEYEVDFHAQLSTLQAFSICVSILHSTEATDAAKQSRDDKFQQCDSLSGLLDEDIKYIFENVQDEKK--------KAPASFVLNPPFSPIARV 732
            M+LEF+K C+VDGSP TVL  PR   KVE+ K+       +D L+  + FS+I F RY   SCK + S++T    ++V KRGSVYQSS+EV  M+       R+KIEF Q S  ALS G+++SLC SDE+SS VE  RSS MS NS+ ST+    S       S +F      P+  + +  +   ++S + +   +Q A+ AER+ V      + P      D + L +RD G  + KSLSA+  LP++  R ES+ S   +  +   P R+  +P  + KSQRSPL +  E I   P   VSI R+K   +SLL DFS T      +S  +K+ +   +  + AHL G LK   +H  P FEF  K PED  +A+TWKVGNALNW+YTFH+   + ++ +   G KES++ S+MVGQMQVSC L ++L +AGA +NS +TEFVLYD+   RK +++ +D+   +E A+   +   N   G+  L   S   K   Q K+  + GH       P   A+LHP+ +I AIV+QVP EKRESLK K  ++K +   +N  D  G +       + +S  K++VV  SGNH LPT+E  GPS L+DRW+ GGGCDCGGWDM CPL  F N   R  + H  ++N+QP KL+ QG K+ +PA  M   ++G+Y VDFHAQLSTLQAFSICV++LH  E++ +++Q  + +  Q +SL   ++E++K + + V +E K        +   SF++NPPFSPIARV
Sbjct:    1 MELEFDKYCIVDGSPTTVLPSPRCHSKVEKRKSKGYPRHGNDLLTVNEDFSEISFHRYRSVSCKNTSSRTTPLGYDEVRKRGSVYQSSKEVRLMRKTAATEGRKKIEFSQSSATALSFGILDSLCGSDEESSQVEQKRSSVMSQNSDFSTAAICKS--GADLQSDDFLDICLNPVSIKGIPPDGSSELSFELDGRDDQCAENAERQSVHGPKFKSKPVVVPVSDGNSLHERDPGFSLHKSLSAKLALPHSPARSESDSSRTSSPMTRFGPVRKVFDPFVKSKSQRSPLSASGETISRNPTGLVSISRSKTSRKSLLHDFSNTGQRMEFQSWSMKDNNNQVVQSTVAHLQGILKVNKKHECPIFEFSTKFPEDFFVARTWKVGNALNWIYTFHSVNERRKSNASGRGSKESHRVSSMVGQMQVSCYLSAELKEAGAFDNSMMTEFVLYDMLHPRKSVSS-QDNCCFIEVAEAPKASDENSFVGSHNLDAGSVKTKIKGQAKHGCDSGHVESSMTYPLPAAELHPHLQIGAIVVQVPYEKRESLKFKSSDKKMDLPLLNFLDHSGGEHEKELVPDSVSPVKMDVVIPSGNHSLPTSESHGPSPLMDRWRLGGGCDCGGWDMACPLHIFSNLRIRMADSHLLMDNRQPLKLFFQGKKDTTPALTMAVMQDGQYAVDFHAQLSTLQAFSICVAVLHIMESSVSSRQEENKQLLQSNSLRVFIEEEVKNLIDAVTEEDKCKGNKKMAEVLPSFIVNPPFSPIARV 757    
Match NameStatsDescription
A0A4S4EY59E-Value: 0.000e+0, PID: 45.48(Uncharacterized protein {ECO:0000313|EMBL:THG2199... [more]
A0A438JJU5E-Value: 0.000e+0, PID: 44.13(Uncharacterized protein {ECO:0000313|EMBL:RVX0920... [more]
F6HUC6E-Value: 0.000e+0, PID: 44.13(Uncharacterized protein {ECO:0000313|EMBL:CCB5834... [more]
A0A2R6Q8H0E-Value: 1.737e-180, PID: 43.91(Eukaryotic translation initiation factor 4 gamma ... [more]
A5BH79E-Value: 1.440e-179, PID: 43.96TFIIS central domain-containing protein {ECO:00002... [more]
A0A5B7BGA7E-Value: 2.767e-172, PID: 49.28(Uncharacterized protein {ECO:0000313|EMBL:MPA6764... [more]
A0A7J0DKJ7E-Value: 1.353e-170, PID: 43.12(Bromo-adjacent domain protein, putative {ECO:0000... [more]
A0A1Q3AQL6E-Value: 3.885e-169, PID: 42.58(DUF3527 domain-containing protein {ECO:0000313|EM... [more]
A0A6A4L9T3E-Value: 1.040e-166, PID: 41.08(Uncharacterized protein {ECO:0000313|EMBL:KAE9452... [more]
A0A6P6TTA0E-Value: 1.816e-165, PID: 41.84(uncharacterized protein LOC113703879 {ECO:0000313... [more]
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Analysis: 
NameDescription

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.

This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.
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