XM_017385996.1

Resource Type: 
Polypeptide
Name: 
XM_017385996.1
Identifier: 
XM_017385996.1-protein
Sequence: 
MSTSRLGSEENSGPESMIKEDLCMDIDPPFTENHATPEDWRRALAKVVPA
VVVLRTTACRAFDTEAAGASYATGFVVDKRNGIILTNRHVVKPGPVVAEA
MFVNREEVPVYPVYRDPVHDFGFFRYDPDAIQFLSYEDIPLAPEGACVGL
EIRVVGNDSGEKNYSAWSFQFEILVKGKELWGYVDGTESAPDSKEKEKLA
KWKVKDAQIMSWILGSMEPSMILNLRPYKSSKDMWGYLKKVYNQSNAARR
FQLELELGQLSQGSMTIQEFYSSFENLWNEYTDIVYESVSAEGLVAVQSV
HETSKRDQFLMKLRGDFEPVRSNLMNRNPVPSIDTCIGELFREEQRLMTQ
TFIDQKSQNSSPIPVAYVAQGKHRGGRDMSNIQCYSCKGFGHVATNCTKK
FCNYCKKAGHTIKDCPIRPPKKSETAYNVSVGSSNAPNFGQSSVTPEMIQ
QMIVNAFSTLGISGNKNSAHKPWYFDSAASNHMTSTTVPLNNVQKYKGDL
HIQTADGNSLPITAVGDISTSLNTVFVSPKLSTNLISVGQLVDNNCTVQF
SNSGCFVQDQVSGKMIAKGPKVGRLFPLLPSPSLVSNYVSCNAVDCNNQV
WHKRLGHPNSHVLSILLKSGLLGNKVSNSSNTDNIHCASCKLGKSKTLPF
PSRKSHTTKAFELVHTDVWGISPVVSHQHYKYFVTFIDDFSRYTWVYFLR
YKSEVFKAFQTFHALIETQFSAKIRILQSDSGGEYTSNEFQSFLQNHGII
SQRSCPSTPQQNGVAERKNRHLLDVVRTLLIESCVPSHFWCEALSTAVYL
INRLPSPTLNNESPYLRLYEDAPDYSDLHIFGCVCFVHLQPHERNKLTAQ
SVKCAFLGYGGTQNGFLCYDPNTRRIRVSRNVIFFENQSFFCTQMTSQLP
SIAILPHFPESSAPSQRFKPGHVYHRRTSPTMAPATLSDAPDPVLPSSND
PPPVRRSSRNSKPPDRYGYTNPVAMSTTLSPISIPTCYKQAMEHECWQQA
METELQALAENHTWDVVSLPPNVKPIGSKWVYSMKLKSDGSLDRYKARLV
ALGNKQEYGINYEETFAPVAKMTTVRTILAVASSKSWPLHQMDVKNAFLN
GDLKEEIYMKLPHGMAWIAPNKVCRLRRTLYGLRQSPREWFDKFRHTLIN
FSFTQSQYDSSLFFHKTQEGMVFLLVYVDDIIITGSDTVLISKLKNMLHS
TFQMKDLGDLKYFLGLEVHSRDQGIFLNQHKYVRDLIELAGLKEATAVDT
PMEVNVKYRKDEGELLPNPYLYRQLVGSLIYLTITRPDISYAVHIVSRFM
QSPRHLHLVAVKRIIRYLIGSPTRGLFFPKNSDLHLTAYSDADWAGCPDT
RRSTTGWCTFLGDALISWKCKKQDHVSKSSTEAEYRAMSAACAEIVWLRG
LLSELGASQINPTPLHADNKSAIQIASNPVFHERTKHIEVDCHYIRDAFT
RGVIELPHVSILAGTLARLDRDAPHYKKDGYNDFNTFYMQAASGTKGGSS
GSPVIDWQGRAVALNAGSKSSSASAFFLPLQRVVRALKFLQNGRETFRDK
WEAVPIPRGTLQVATRQQFSPWCFL
Sequence Length: 
1575
Sequence Checksum: 
9b39a994e08b362f7d33b6c66716e356
View location in JBrowse: 
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017385996.1, derives from mRNA, XM_017385996.1.
Loading content
Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017385996.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017385996.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2I0ACR9 ((Retrovirus-related Pol polyprotein from transposon TNT 1-94 {ECO:0000313|EMBL:PKA53352.1}) (3.1.13.- {ECO:0000313|EMBL:PKA53352.1}))

HSP 1 Score: 2039.62 bits (5283), Expect = 0.000e+0
Identity = 958/1169 (81.95%), Postives = 1044/1169 (89.31%), Query Frame = 0
 
Query:  300 VHETSKRDQFLMKLRGDFEPVRSNLMNRNPVPSIDTCIGELFREEQRLMTQTFIDQKSQNSSPIPVAYVAQGKHRGGRDMSNIQCYSCKGFGHVATNCTKKFCNYCKKAGHTIKDCPIRPPKKSETAYNVSVGSSNAPNFGQSSVTPEMIQQMIVNAFSTLGISGNKNSAHKPWYFDSAASNHMTSTTVPLNNVQKYKGDLHIQTADGNSLPITAVGDISTSLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGCFVQDQVSGKMIAKGPKVGRLFPLLPSPSLVSNYVSCNAVDCNNQVWHKRLGHPNSHVLSILLKSGLLGNKVSNSSNTDNIHCASCKLGKSKTLPFPSRKSHTTKAFELVHTDVWGISPVVSHQHYKYFVTFIDDFSRYTWVYFLRYKSEVFKAFQTFHALIETQFSAKIRILQSDSGGEYTSNEFQSFLQNHGIISQRSCPSTPQQNGVAERKNRHLLDVVRTLLIESCVPSHFWCEALSTAVYLINRLPSPTLNNESPYLRLYEDAPDYSDLHIFGCVCFVHLQPHERNKLTAQSVKCAFLGYGGTQNGFLCYDPNTRRIRVSRNVIFFENQSFFCTQMTSQLPSIAILPHFPESSAPSQRFKPGHVYHRRTSPTMAPAT--------LSDAPDPVLPSSNDPPPVRRSSRNSKPPDRYGYTNPVAMSTTLSPISIPTCYKQAMEHECWQQAMETELQALAENHTWDVVSLPPNVKPIGSKWVYSMKLKSDGSLDRYKARLVALGNKQEYGINYEETFAPVAKMTTVRTILAVASSKSWPLHQMDVKNAFLNGDLKEEIYMKLPHGMAWIAPNKVCRLRRTLYGLRQSPREWFDKFRHTLINFSFTQSQYDSSLFFHKTQEGMVFLLVYVDDIIITGSDTVLISKLKNMLHSTFQMKDLGDLKYFLGLEVHSRDQGIFLNQHKYVRDLIELAGLKEATAVDTPMEVNVKYRKDEGELLPNPYLYRQLVGSLIYLTITRPDISYAVHIVSRFMQSPRHLHLVAVKRIIRYLIGSPTRGLFFPKNSDLHLTAYSDADWAGCPDTRRSTTGWCTFLGDALISWKCKKQDHVSKSSTEAEYRAMSAACAEIVWLRGLLSELGASQINPTPLHADNKSAIQIASNPVFHERTKHIEVDCHYIRDAFTRGVIELPHVS 1460
            +HETSKRDQFLMKLRG+FE +RSNLMNR PVP +D C+GEL REEQRL+TQ  ++QK+QNS+PIPVAY AQG+ +GGRDM+N+QCYSCK FGH+ATNCTKKFCNYCKK GH IKDC IRPPKK ETAYNVSVG SNAP+  QSS+TPEM+QQMIV+A S LG+SGNKNS  KPWYFDS ASNHMT+T +PLNNVQKYKGDL I TADGNSLPITAVGDISTSLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGC VQDQVSGKMIAKGPKVGRLFPLL SPS +SNYV+CNAV C+NQVWH+RLGHPNSHVL +LLKSGLLGNK S SSN D   CASCKLGKSKTLPFP  K+ TTK FELVHTDVWGI+PV+SH+HYKYFVTFIDDF+R+TWVYFLR KSEVF  F+ F AL+ETQFSAKI+ILQSDSGGEY SNEFQ FLQ+HGIISQRSCP TPQQNGVAERKNRHLLDVVRTLLIESCVPSHFWCEALSTAVYLINRLPS  LNN+SPY  L+  AP+YS+LHIFGCVCF HL  HERNKLTAQSVKCAFLGY GTQ GFLCYDP+ RR RVSRNVIFFENQ FF TQ TS+ PS++ LPHFPES  P QRF PG+VY RRT P     T        L  A DP+LP SNDPPP+RRSSR  KPP+RYG++ PVAMST LS ISIPTCYKQAM+HECWQQAME ELQAL ENHTWD+VS PPNVKPIGSKWVYS+KLKSDGSLDRYKARLVALGNKQEYG+NYEETFAPVAKMTTVRTILA+ASSKSW LHQMDVKNAFLNGDL EEIYMKLP GM+  A ++VC+LRR+LYGL+Q+PR WF+KFR TL+ FSFTQSQYDSSLFFHK+  GMVFLLVYVDDIIITG+D  LI+KL+NMLHSTF+MKDLG L YFLGLEVHSRD G+FLNQHKY++DLIELAGLK+ATAVDTPMEVNVKYRKDEGELLP+P+LYRQLVGSLIYLTITRPDISYAVHIVS+FMQSPRHLHL AV+RIIRYLIGSPTRGLFFP NS LHLTAYSDADWAGCPDTR+STTGWC FLGDALISWKCKKQD VSKSSTEAEYRAMSAAC+EIVWLRGLLSELG    +PTPLH DN SAIQIA+NPV+HERTKHIEVDCHYIR+AFTRGVI LPH++
Sbjct:    1 MHETSKRDQFLMKLRGEFEAIRSNLMNREPVPLLDICVGELLREEQRLITQAVLEQKAQNSAPIPVAYAAQGRSKGGRDMTNVQCYSCKEFGHIATNCTKKFCNYCKKTGHIIKDCSIRPPKKPETAYNVSVGPSNAPSPSQSSITPEMVQQMIVSALSALGLSGNKNSNPKPWYFDSGASNHMTNTALPLNNVQKYKGDLQIHTADGNSLPITAVGDISTSLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGCLVQDQVSGKMIAKGPKVGRLFPLLLSPSSMSNYVACNAVQCDNQVWHRRLGHPNSHVLRVLLKSGLLGNKNSTSSNNDVADCASCKLGKSKTLPFPLHKTRTTKPFELVHTDVWGIAPVISHEHYKYFVTFIDDFTRFTWVYFLRSKSEVFSVFKVFLALVETQFSAKIKILQSDSGGEYMSNEFQFFLQSHGIISQRSCPFTPQQNGVAERKNRHLLDVVRTLLIESCVPSHFWCEALSTAVYLINRLPSANLNNDSPYFCLFGHAPNYSNLHIFGCVCFAHLPAHERNKLTAQSVKCAFLGYAGTQKGFLCYDPHARRTRVSRNVIFFENQPFFSTQQTSEFPSLSALPHFPESPTPVQRFTPGYVYRRRTPPASDALTSLTEVLPHLPTASDPILPISNDPPPLRRSSRPHKPPERYGFSTPVAMSTILSSISIPTCYKQAMKHECWQQAMEAELQALEENHTWDIVSCPPNVKPIGSKWVYSVKLKSDGSLDRYKARLVALGNKQEYGLNYEETFAPVAKMTTVRTILAIASSKSWALHQMDVKNAFLNGDLNEEIYMKLPPGMSLTASHEVCKLRRSLYGLKQAPRAWFEKFRSTLLTFSFTQSQYDSSLFFHKSTTGMVFLLVYVDDIIITGNDNGLITKLQNMLHSTFKMKDLGHLTYFLGLEVHSRDHGLFLNQHKYIQDLIELAGLKDATAVDTPMEVNVKYRKDEGELLPDPFLYRQLVGSLIYLTITRPDISYAVHIVSKFMQSPRHLHLAAVRRIIRYLIGSPTRGLFFPTNSALHLTAYSDADWAGCPDTRKSTTGWCIFLGDALISWKCKKQDCVSKSSTEAEYRAMSAACSEIVWLRGLLSELGCPPSDPTPLHGDNTSAIQIAANPVYHERTKHIEVDCHYIREAFTRGVITLPHLT 1169    
BLAST of XM_017385996.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A445KL17 ((Retrovirus-related Pol polyprotein from transposon TNT 1-94 {ECO:0000313|EMBL:RZC11542.1}) (2.7.7.7 {ECO:0000313|EMBL:RZC11542.1}))

HSP 1 Score: 1727.61 bits (4473), Expect = 0.000e+0
Identity = 845/1290 (65.50%), Postives = 1016/1290 (78.76%), Query Frame = 0
 
Query:  162 KNYSAWSFQFEILVKGKELWGYVDGTESAPDSK-EKEKLAKWKVKDAQIMSWILGSMEPSMILNLRPYKSSKDMWGYLKKVYNQSNAARRFQLELELGQLSQGSMTIQEFYSSFENLWNEYTDIVYESVSAEGLVAVQSVHETSKRDQFLMKLRGDFEPVRSNLMNRNPVPSIDTCIGELFREEQRLMTQTFIDQKSQNSSPIPVAYVAQGKHRGGRDMSNIQCYSCKGFGHVATNCTKKFCNYCKKAGHTIKDCPIRPPKKSETAYNVSVGSS---NAPNFGQSSVTPEMIQQMIVNAFSTLGISGNKNSAHKPWYFDSAASNHMTSTTVPLNNVQKYKGDLHIQTADGNSLPITAVGDISTSLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGCFVQDQVSGKMIAKGPKVGRLFPL--LPSPSLVSNYVSCNAVDCNNQVWHKRLGHPNSHVLSILLKSGLLGNKVSNSSNTDNIHCASCKLGKSKTLPFPSRKSHTTKAFELVHTDVWGISPVVSHQHYKYFVTFIDDFSRYTWVYFLRYKSEVFKAFQTFHALIETQFSAKIRILQSDSGGEYTSNEFQSFLQNHGIISQRSCPSTPQQNGVAERKNRHLLDVVRTLLIESCVPSHFWCEALSTAVYLINRLPSPTLNNESPYLRLYEDAPDYSDLHIFGCVCFVHLQPHERNKLTAQSVKCAFLGYGGTQNGFLCYDPNTRRIRVSRNVIFFENQSFFCTQMTSQLPSIAILPHFPESSAPSQRFKPGHVYHRRTSPTMAPATLSDAP--DPVLPSSNDPPPV----RRSSRNSKPPDRYGYTNPVAMSTTLSPISIPTCYKQAMEHECWQQAMETELQALAENHTWDVVSLPPNVKPIGSKWVYSMKLKSDGSLDRYKARLVALGNKQEYGINYEETFAPVAKMTTVRTILAVASSKSWPLHQMDVKNAFLNGDLKEEIYMKLPHGMAWIAPNKVCRLRRTLYGLRQSPREWFDKFRHTLINFSFTQSQYDSSLFFHKTQEGMVFLLVYVDDIIITGSDTVLISKLKNMLHSTFQMKDLGDLKYFLGLEVHSRDQGIFLNQHKYVRDLIELAGLKEATAVDTPMEVNVKYRKDEGELLPNPYLYRQLVGSLIYLTITRPDISYAVHIVSRFMQSPRHLHLVAVKRIIRYLIGSPTRGLFFPKNSDLHLTAYSDADWAGCPDTRRSTTGWCTFLGDALISWKCKKQDHVSKSSTEAEYRAMSAACAEIVWLRGLLSELGASQINPTPLHADNKSAIQIASNPVFHERTKHIE 1439
            KNYSAW+FQF+I + GK+LWG+VDG+   PD    K + AKW VKDAQ+M+WILGS++P+++LNLRPYK++  MW YLKKVY+Q+N ARRFQLE ++    Q S++I +FYS F NLW EYTDIVY  + +EGL +VQ+VHET+KRDQFLMKLR DFE +RSNLM+RNPVPS+D C   L REEQRL+TQ+ I       + +PVAYVA+GK +   DM  IQC+ CK FGH A+NC  KFCNYCKK GH IK+CPIRPPK++ TA+  SV SS    AP+    ++TPEM+QQMI++AFS LG SG  +S   PWYFDS ASNHMT+    L N++KY GDL I TADGN LPITA GDIS SL  VFVSP L++NLISVGQLVDN+C VQFS SGC VQDQ SGK+IAKGPKVGRLFP+      SL    VSCN+   + QVWHKRLGHPN++VL  LLKS  LGNK ++S N  +  C  CKLGKSK LPFP+ +S+ T+ FE++H+DVWG++PV+SH HYKYF+TFIDD+SR+TWVYFLR K EVF  F+ FHA ++TQFS+KI+I +SD+ GEY S+ FQ FLQ++GI+ QRSCPSTPQQNGVAERKNRHLLDVVRTLL+ES VPS F CEALSTAV+LINRL SP++ NESP+ RLY   P+YS+L IFGCVC+VHL P ER KLTAQSV+CAFLGY   Q GFLCYDP  RRIRVSRNVIF EN  FF +      P I++LP F  S A     KP   Y+RRT+      T    P  D  L +     P     RRSSR  KPPDRY ++    M+ +LS I IP+ Y Q M++ CWQ+A+ETEL AL EN TWD+V  P +VKP+ SK+V+S+KL+SDGS+DRYKARLV LGNKQ+YG++Y+ETFAPVAKMTTVRTILA+A+S+SWPLHQMDVKNAFL+GDLKEE+Y+KLP+GM   +PN VC+L+R+LYGL+Q+PR WF+KFR TL+ F FTQSQYD SLF  +T +G+V LLVYVDDI++TGSD  ++S++KN LHSTFQMKDLG L YFLGLEVH   QGI L QHKY++DL++LAGL  AT VDTPMEVNVKY++DEGELL +P  YR+LVGSLIYLTITRP+IS+AVH VS+FMQSPRHLHL AVKRIIRYL+G+P  GLFFP +S + L AYSDADWAGCPDTR+STTGWC FLG+A ISWKCKKQD VSKSSTEAEYRAMSAAC+EI+WLRGLL+ELG SQ   TPLHADN SAIQIA+NPV+HERTKHIE
Sbjct:  899 KNYSAWAFQFQIFLTGKDLWGHVDGSSPIPDKDTAKVEHAKWTVKDAQVMAWILGSVDPNIVLNLRPYKTAATMWNYLKKVYSQNNEARRFQLEHDIATFKQDSLSISDFYSQFMNLWAEYTDIVYADLPSEGLNSVQTVHETTKRDQFLMKLRSDFEGIRSNLMHRNPVPSLDACFNALLREEQRLLTQSIIG--DHKYAIVPVAYVARGKPKS-HDMRTIQCFYCKQFGHYASNCPNKFCNYCKKDGHIIKECPIRPPKRNVTAFTASVDSSVQQQAPD-PAPTMTPEMVQQMIISAFSALGFSGKSSS---PWYFDSGASNHMTNNAQFLTNIKKYLGDLKIHTADGNPLPITATGDISPSLTNVFVSPGLTSNLISVGQLVDNDCQVQFSQSGCLVQDQHSGKIIAKGPKVGRLFPIQFSLPSSLSLPLVSCNSAIVDYQVWHKRLGHPNANVLHDLLKSNYLGNKHNSSLNAVHFDCIPCKLGKSKILPFPTHQSNVTQPFEIIHSDVWGVAPVISHAHYKYFITFIDDYSRFTWVYFLRSKDEVFSTFKFFHAFVQTQFSSKIKIFRSDNEGEYMSHSFQDFLQSNGIVFQRSCPSTPQQNGVAERKNRHLLDVVRTLLLESHVPSRFLCEALSTAVHLINRLSSPSIGNESPFNRLYGHPPNYSNLRIFGCVCYVHLPPRERTKLTAQSVECAFLGYSPHQKGFLCYDPTIRRIRVSRNVIFQENVYFFASHPDLTSPPISVLPLFSNSHAGEPSPKPLLTYNRRTTANQNQQTEPQGPLRDNSLAADPVEEPEPAPPRRSSRIIKPPDRYIHS----MTASLSSIPIPSSYSQVMKNSCWQKAIETELLALEENQTWDIVPCPTSVKPLSSKFVFSIKLRSDGSIDRYKARLVVLGNKQQYGLDYDETFAPVAKMTTVRTILALAASQSWPLHQMDVKNAFLHGDLKEEVYIKLPNGMPTPSPNTVCKLKRSLYGLKQAPRVWFEKFRSTLLVFEFTQSQYDPSLFLQRTPKGIVVLLVYVDDIVVTGSDQDVVSRIKNQLHSTFQMKDLGHLTYFLGLEVHYHHQGISLCQHKYIQDLVQLAGLPNATPVDTPMEVNVKYQRDEGELLDDPTHYRKLVGSLIYLTITRPNISFAVHTVSKFMQSPRHLHLSAVKRIIRYLLGTPKHGLFFPADSSIQLQAYSDADWAGCPDTRKSTTGWCMFLGNAPISWKCKKQDSVSKSSTEAEYRAMSAACSEIIWLRGLLTELGFSQAQQTPLHADNTSAIQIAANPVYHERTKHIE 2177    
BLAST of XM_017385996.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2N9ETU9 ((Uncharacterized protein {ECO:0000313|EMBL:SPC78252.1}))

HSP 1 Score: 1639.4 bits (4244), Expect = 0.000e+0
Identity = 803/1320 (60.83%), Postives = 996/1320 (75.45%), Query Frame = 0
 
Query:  162 KNYSAWSFQFEILVKGKELWGYVDGTESAPDSKEKEKLAKWKVKDAQIMSWILGSMEPSMILNLRPYKSSKDMWGYLKKVYNQSNAARRFQLELELGQLSQGSMTIQEFYSSFENLWNEYTDIVYESVSAEGLVAVQSVHETSKRDQFLMKLRGDFEPVRSNLMNRNPVPSIDTCIGELFREEQRLMTQTFIDQKSQNSSPIPVAYVAQGKHRGGRDMSNIQCYSCKGFGHVATNCTKKFCNYCKKAGHTIKDCPIRPPKKSETAYNVSVGSSNAPNFGQ-----------SSVTPEMIQQMIVNAFSTLGISGNKNSAHKPWYFDSAASNHMTSTTVPLNNVQKYKGDLHIQTADGNSLPITAVGDISTSLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGCFVQDQVSGKMIAKGPKVGRLFPL-LPSPSLVSNYVS--CNAVDCNNQVWHKRLGHPNSHVLSILLKSGLLGNKVSNSSNTDNIHCASCKLGKSKTLPFPSRKSHTTKAFELVHTDVWGISPVVSHQHYKYFVTFIDDFSRYTWVYFLRYKSEVFKAFQTFHALIETQFSAKIRILQSDSGGEYTSNEFQSFLQNHGIISQRSCPSTPQQNGVAERKNRHLLDVVRTLLIESCVPSHFWCEALSTAVYLINRLPSPTLNNESPYLRLYEDAPDYSDLHIFGCVCFVHLQPHERNKLTAQSVKCAFLGYGGTQNGFLCYDPNTRRIRVSRNVIFFENQSFFCTQMTSQLPSIAILPHFPESSAPS----QRFKPGHVYHRRTSPTMAPATLSDAPDPVLPSSNDPPPVRRSSRNSKPPDRYGY----TNPVAMSTTLSPISIPTCYKQAMEHECWQQAMETELQALAENHTWDVVSLPPNVKPIGSKWVYSMKLKSDGSLDRYKARLVALGNKQEYGINYEETFAPVAKMTTVRTILAVASSKSWPLHQMDVKNAFLNGDLKEEIYMKLPHGMAWIAPNKVCRLRRTLYGLRQSPREWFDKFRHTLINFSFTQSQYDSSLFFHKTQEGMVFLLVYVDDIIITGSDTVLISKLKNMLHSTFQMKDLGDLKYFLGLEVHSRDQGIFLNQHKYVRDLIELAGLKEATAVDTPMEVNVKYRKDEGELLPNPYLYRQLVGSLIYLTITRPDISYAVHIVSRFMQSPRHLHLVAVKRIIRYLIGSPTRGLFFPKNSDLHLTAYSDADWAGCPDTRRSTTGWCTFLGDALISWKCKKQDHVSKSSTEAEYRAMSAACAEIVWLRGLLSELGASQINPTPLHADNKSAIQIASNPVFHERTKHIEVDCHYIRDAFTRGVIELPHV 1459
            KNY+AW FQ E  +KGK LWG++DG+     S+  +     K    QIMSWILGSMEP +IL+LRP++S+K MW YLK+VY+Q N AR+F LEL +    QG +++Q++YS F  LWN+Y+D+V   VSAEGL ++Q V  TS+RDQFLMKLR +FE +R++L+NR+PVP+++ C GEL REEQRL TQ  ++Q    S+ + VAY A GK +G RDMS  QCYSCK +GH+A NC +KFCNYCK+ GH IK+C IRP  +S  AY+  V   + P                S+T EM+Q+MIV+AFS LG  G  +S    W  DS ASNHMT++   L+NV++Y G  HIQTA+G++LPI AVGD+S+ L  V VSP LS NL+SVGQLVD +  V F++ GC VQDQ+SG++IAKGPK GRLF L +P+P  +  ++S  CN    + +VWHKRLGHPNS +LS LLKSGLL NK   SS   +  CA+CKLGKSK LPFPS  S  T +FE++H+DVWGISP +SH  YKYFVTFIDD+S+YTWVYFLR+KSEVF  F+ F AL++TQFSA ++IL+SDSGGEY S+EFQSFL + GIISQRSCP TPQQNGVAERKNRHLLDVVRTLLIES VP  FW EAL+TA +LINRLPS  LN ESPY RLY   P Y++LH FGCVCF+HL P +RNKL+AQS++CAFLGY  TQ G++CYDP + R+RVSRNV+FFENQ FF    +S+ P +A LP F ++        +RF+PG VY RR SP + P+       P+LP    P P+RRSSR S PPDRYG+    T   A+S TLS I++PT Y QA++ +CWQQAM+ EL AL  N TWDV+  P  V P+G KWVYS+K+KSDGSLDRYKARLVALGN QEYG+NYEETFAPVAKMTT+RTILA+A+S++W LHQMDVKNAFL+GDLKE++YM+ P G+     + VC+LRR+LYGL+Q+PR W++KF  TL  F+  +S+YD+SLF  KT+ G+V LLVYVDDIIITG+D+ LIS+LK  L  +F MKDLG L YFLGLE+ +   GIFL+QHKY +DL+  AGL+++T +DTPME+N+K RK+EG+LL +P  YR LVGSL+YLTITRPDISYAV  VS+FM SPRHLH+ AV+RIIRY+ G+  RGL +P  + L L AYSDAD+AGC DTRRSTTGWC FLG ALISWK KKQD VSKSSTE+EYRAMS ACAEI+WLRGLL+ELG S   PT LHADN SAI I++NP+FHERTKHIEVDCH+IR+AF    I LPHV
Sbjct:   14 KNYTAWEFQLETFLKGKALWGHIDGSSKGGSSEADKAAWAAKDN--QIMSWILGSMEPHLILSLRPHRSAKAMWDYLKQVYHQDNNARQFHLELAIANYIQGDLSVQDYYSGFLTLWNDYSDLVTAKVSAEGLASIQHVQRTSQRDQFLMKLRPEFESIRASLVNRDPVPTLEACFGELLREEQRLNTQNLMEQSRIASNTVSVAYAAHGKGKG-RDMSTTQCYSCKKYGHIAPNCPQKFCNYCKQPGHIIKECTIRP-SRSTKAYHAVVTDDSQPAANAVSSAVVLQPPAPSLTREMVQEMIVSAFSALGFQGTGSSP--SWILDSGASNHMTNSLHGLSNVREYCGSSHIQTANGSALPIVAVGDVSSFLKDVLVSPNLSVNLVSVGQLVDQDYGVNFTHDGCVVQDQMSGQVIAKGPKHGRLFSLQIPAPRNLPPFLSLLCNKSRVSPEVWHKRLGHPNSRILSYLLKSGLLNNKEHFSSAVFS-DCATCKLGKSKILPFPSEGSRATHSFEIIHSDVWGISPTISHAQYKYFVTFIDDYSKYTWVYFLRHKSEVFPMFKLFLALVQTQFSATVKILRSDSGGEYMSHEFQSFLHSKGIISQRSCPYTPQQNGVAERKNRHLLDVVRTLLIESSVPPKFWVEALTTATFLINRLPSQALNLESPYFRLYHHHPTYTNLHTFGCVCFMHLPPPDRNKLSAQSIRCAFLGYSVTQKGYVCYDPTSNRVRVSRNVLFFENQWFFPMSSSSESP-VAFLPSFDDTLHDPRPLIERFQPGMVYQRR-SPVLPPSA------PILP----PVPLRRSSRVSAPPDRYGFPLTGTTSSALSATLSSIAVPTSYSQAVKEKCWQQAMQEELCALEANKTWDVIDCPAGVTPLGCKWVYSIKVKSDGSLDRYKARLVALGNNQEYGVNYEETFAPVAKMTTIRTILAIAASQNWDLHQMDVKNAFLHGDLKEDVYMRPPAGLLSTPTSAVCKLRRSLYGLKQAPRAWYEKFTSTLFKFALHKSKYDASLFLRKTENGVVILLVYVDDIIITGTDSALISQLKQYLQDSFHMKDLGSLTYFLGLEITTGAHGIFLSQHKYAQDLVAAAGLQDSTPLDTPMELNLKLRKEEGDLLSDPVSYRTLVGSLVYLTITRPDISYAVQQVSQFMASPRHLHMAAVRRIIRYVHGTALRGLSYPAGTSLDLAAYSDADYAGCSDTRRSTTGWCMFLGPALISWKSKKQDRVSKSSTESEYRAMSQACAEILWLRGLLTELGFSPRGPTSLHADNTSAIHISANPIFHERTKHIEVDCHFIREAFEAQTISLPHV 1314    
BLAST of XM_017385996.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2N9IUF9 ((Uncharacterized protein {ECO:0000313|EMBL:SPD29027.1}))

HSP 1 Score: 1594.71 bits (4128), Expect = 0.000e+0
Identity = 788/1320 (59.70%), Postives = 975/1320 (73.86%), Query Frame = 0
 
Query:  162 KNYSAWSFQFEILVKGKELWGYVDGTESAPDSKEKEKLAKWKVKDAQIMSWILGSMEPSMILNLRPYKSSKDMWGYLKKVYNQSNAARRFQLELELGQLSQGSMTIQEFYSSFENLWNEYTDIVYESVSAEGLVAVQSVHETSKRDQFLMKLRGDFEPVRSNLMNRNPVPSIDTCIGELFREEQRLMTQTFIDQKSQNSSPIPVAYVAQGKHRGGRDMSNIQCYSCKGFGHVATNCTKKFCNYCKKAGHTIKDCPIRPPKKSETAYNVSVGSSNAPNFG-----------QSSVTPEMIQQMIVNAFSTLGISGNKNSAHKPWYFDSAASNHMTSTTVPLNNVQKYKGDLHIQTADGNSLPITAVGDISTSLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGCFVQDQVSGKMIAKGPKVGRLFPL-LPSPSLVSNYVS--CNAVDCNNQVWHKRLGHPNSHVLSILLKSGLLGNKVSNSSNTDNIHCASCKLGKSKTLPFPSRKSHTTKAFELVHTDVWGISPVVSHQHYKYFVTFIDDFSRYTWVYFLRYKSEVFKAFQTFHALIETQFSAKIRILQSDSGGEYTSNEFQSFLQNHGIISQRSCPSTPQQNGVAERKNRHLLDVVRTLLIESCVPSHFWCEALSTAVYLINRLPSPTLNNESPYLRLYEDAPDYSDLHIFGCVCFVHLQPHERNKLTAQSVKCAFLGYGGTQNGFLCYDPNTRRIRVSRNVIFFENQSFFCTQMTSQLPSIAILPHFPESSAPS----QRFKPGHVYHRRTSPTMAPATLSDAPDPVLPSSNDPPPVRRSSRNSKPPDRYGY----TNPVAMSTTLSPISIPTCYKQAMEHECWQQAMETELQALAENHTWDVVSLPPNVKPIGSKWVYSMKLKSDGSLDRYKARLVALGNKQEYGINYEETFAPVAKMTTVRTILAVASSKSWPLHQMDVKNAFLNGDLKEEIYMKLPHGMAWIAPNKVCRLRRTLYGLRQSPREWFDKFRHTLINFSFTQSQYDSSLFFHKTQEGMVFLLVYVDDIIITGSDTVLISKLKNMLHSTFQMKDLGDLKYFLGLEVHSRDQGIFLNQHKYVRDLIELAGLKEATAVDTPMEVNVKYRKDEGELLPNPYLYRQLVGSLIYLTITRPDISYAVHIVSRFMQSPRHLHLVAVKRIIRYLIGSPTRGLFFPKNSDLHLTAYSDADWAGCPDTRRSTTGWCTFLGDALISWKCKKQDHVSKSSTEAEYRAMSAACAEIVWLRGLLSELGASQINPTPLHADNKSAIQIASNPVFHERTKHIEVDCHYIRDAFTRGVIELPHV 1459
            KNY+AW FQ E  +KGK LWG++DG+     S+  +     K    QIMSWILGSMEP +IL+LRP++S+K MW YLK+VY+Q N ARRF LEL +    QG +++Q++YS F  LWN+Y+D+V   VSAEGL +VQ VH TS+RDQFLMKLR +FE +R++L+NR+PVP+++ C GEL REEQRL TQ  ++Q    S+ + VAY A GK + GRDMS  QCYSCK +GH+A NC +KFCNYCK+ GH IK+C IR P +S  AY+  V   + P                S+T EM+Q+MIV+AFS LG  G  +S    W  DS ASNHMT++   L+NV++Y G  HIQTA+                             +SVGQLVD +  V F++ GC VQDQ+SG++IAKGPK GRLF L +P+P  +  ++S  CN    + +VWHKRLGHPNS +LS LLKSGLL NK   SS   +  CA+CKLGKSK LPFPS  S  T +FE++H+DVWGISP +SH  YKYFVTFIDD+S+YTWVYFLR+KSEVF  F+ F AL++TQFSA ++IL+SDSGGEY S+EFQSFL + GIISQRSCP TPQQNGVAERKNRHLLDVVRTLLIES VP  FW EAL+TA +LINRLPS  LN ESPY RLY   P Y++LH FGCVCF+HL P +RNKL+AQS++CAFLGY  TQ G++CYDP + R+RVSRNV+FFENQ FF    +S+ P +A LP F ++        +RF+PG VY RR SP + P+       P+LP    P P+RRSSR S PPDRYG+    T   A+S TLS I++PT Y QA++ +CWQQAM+ EL AL  N TWDV+  P  V P+G KWVYS+K+KSDGSLDRYKARLVALGN QEYG+NYEETFAPVAKMTT+RTILA+A+S++W LHQMDVKNAFL+GDLKE++YM+ P G+     + VC+LRR+LYGL+Q+PR W++KF  TL  F+  +S+YD+SLF  KT+ G+V LLVYVDDIIITG+D+ LIS+LK  L  +F MKDLG L YFLGLE+ +   GIFL+QHKY +DL+  AGL+++T +DTPME+N+K RK+EG+LL +P  YR LVGSL+YLTITRPDISYAV  VS+FM SPRHLH+ AV+RIIRY+ G+  RGL +P  + L L AYSDAD+AGC DTRRSTTGWC FLG ALISWK KKQD VSKSSTE+EYRAMS ACAEI+WLRGLL+ELG S   PT LHADN SAI I++NP+FHERTKHIEVDCH+IR+AF    I LPHV
Sbjct:   14 KNYTAWEFQLETFLKGKALWGHIDGSSKGGSSEADKAAWAAKDN--QIMSWILGSMEPHLILSLRPHRSAKAMWDYLKQVYHQDNNARRFHLELAIANYIQGDLSVQDYYSGFLTLWNDYSDLVTAKVSAEGLASVQHVHRTSQRDQFLMKLRPEFESIRASLVNRDPVPTLEACFGELLREEQRLNTQNLMEQSRIASNTVSVAYAAHGKGK-GRDMSTTQCYSCKKYGHIAPNCPQKFCNYCKQPGHIIKECTIR-PSRSTKAYHAVVTDDSQPAANAVSSAVVLQPPAPSLTREMVQEMIVSAFSALGFQGTGSSP--SWILDSGASNHMTNSLHGLSNVREYCGSSHIQTAN-----------------------------VSVGQLVDQDYGVNFTHDGCVVQDQMSGQVIAKGPKHGRLFSLQIPAPRNLPPFLSLLCNKSRVSPEVWHKRLGHPNSRILSYLLKSGLLNNKEHFSSAVFS-DCATCKLGKSKILPFPSEGSRATHSFEIIHSDVWGISPTISHAQYKYFVTFIDDYSKYTWVYFLRHKSEVFPMFKLFLALVQTQFSATVKILRSDSGGEYMSHEFQSFLHSKGIISQRSCPYTPQQNGVAERKNRHLLDVVRTLLIESSVPPKFWVEALTTATFLINRLPSQALNLESPYFRLYHHHPTYTNLHTFGCVCFMHLPPPDRNKLSAQSIRCAFLGYSVTQKGYVCYDPTSNRVRVSRNVLFFENQWFFPMSSSSESP-VAFLPSFDDTLHDPRPLIERFQPGMVYQRR-SPVLPPSA------PILP----PVPLRRSSRVSAPPDRYGFPLTGTTSSALSATLSSIAVPTSYSQAVKEKCWQQAMQEELCALEANKTWDVIDCPAGVTPLGCKWVYSIKVKSDGSLDRYKARLVALGNNQEYGVNYEETFAPVAKMTTIRTILAIAASQNWDLHQMDVKNAFLHGDLKEDVYMRPPAGLLSTPTSAVCKLRRSLYGLKQAPRAWYEKFTSTLFKFALHKSKYDASLFLRKTENGVVILLVYVDDIIITGTDSALISQLKQYLQDSFHMKDLGSLTYFLGLEITTGAHGIFLSQHKYAQDLVAAAGLQDSTPLDTPMELNLKLRKEEGDLLSDPVSYRTLVGSLVYLTITRPDISYAVQQVSQFMASPRHLHMAAVRRIIRYVHGTALRGLSYPAGTSLDLAAYSDADYAGCSDTRRSTTGWCMFLGPALISWKSKKQDRVSKSSTESEYRAMSQACAEILWLRGLLTELGFSPRGPTSLHADNTSAIHISANPIFHERTKHIEVDCHFIREAFEAQTISLPHV 1285    
BLAST of XM_017385996.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438JYT1 ((Retrovirus-related Pol polyprotein from transposon TNT 1-94 {ECO:0000313|EMBL:RVX14120.1}))

HSP 1 Score: 1591.63 bits (4120), Expect = 0.000e+0
Identity = 794/1338 (59.34%), Postives = 977/1338 (73.02%), Query Frame = 0
 
Query:  163 NYSAWSFQFEILVKGKELWGYVDGTE-SAPDSKEKEKLA----KWKVKDAQIMSWILGSMEPSMILNLRPYKSSKDMWGYLKKVYNQSNAARRFQLELELGQLSQGSMTIQEFYSSFENLWNEYTDIVYESVSAEGLVAVQSVHETSKRDQFLMKLRGDFEPVRSNLMNRNPVPSIDTCIGELFREEQRLMTQTFIDQKSQNSSPIPVAYVAQGKHRGGRDM--SNIQCYSCKGFGHVATNCTKKFCNYCKKAGHTIKDCPIRPPKKSETAYNVSV-----GSSNAPNFGQSS--------VTPEMIQQMIVNAFSTLGISGNKNSAHKPWYFDSAASNHMTSTTVPLNNVQKYKGDLHIQTADGNSLPITAVGDISTSLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGCFVQDQVSGKMIAKGPKVGRLFPL-LPSPSLVSNYVSCNAVDCNN-----QVWHKRLGHPNSHVLSILLKSGLLGNKVSNSSNTDNIHCASCKLGKSKTLPFPSRKSHTTKAFELVHTDVWGISPVVSHQHYKYFVTFIDDFSRYTWVYFLRYKSEVFKAFQTFHALIETQFSAKIRILQSDSGGEYTSNEFQSFLQNHGIISQRSCPSTPQQNGVAERKNRHLLDVVRTLLIESCVPSHFWCEALSTAVYLINRLPSPTLNNESPYLRLYEDAPDYSDLHIFGCVCFVHLQPHERNKLTAQSVKCAFLGYGGTQNGFLCYDPNTRRIRVSRNVIFFENQSFF-------CTQMTSQLPSIAILPHFPESSAPSQRFKPGHVYHRRTSP-TMAPATLSDAPDPVLPSSNDPPPVRRSSRNSKPPDRYGY------TNPVAMSTTLSPISIPTCYKQAMEHECWQQAMETELQALAENHTWDVVSLPPNVKPIGSKWVYSMKLKSDGSLDRYKARLVALGNKQEYGINYEETFAPVAKMTTVRTILAVASSKSWPLHQMDVKNAFLNGDLKEEIYMKLPHGMAWIAPNKVCRLRRTLYGLRQSPREWFDKFRHTLINFSFTQSQYDSSLFFHKTQEGMVFLLVYVDDIIITGSDTVLISKLKNMLHSTFQMKDLGDLKYFLGLEVHSRDQGIFLNQHKYVRDLIELAGLKEATAVDTPMEVNVKYRKDEGELLPNPYLYRQLVGSLIYLTITRPDISYAVHIVSRFMQSPRHLHLVAVKRIIRYLIGSPTRGLFFPKNSDLHLTAYSDADWAGCPDTRRSTTGWCTFLGDALISWKCKKQDHVSKSSTEAEYRAMSAACAEIVWLRGLLSELGASQINPTPLHADNKSAIQIASNPVFHERTKHIEVDCHYIRDAFTRGVIELPHVS 1460
            NYS W+FQFE+ +KGK+LWG++DGT+   P + +K +       W V DA+IMSW+LG +EP ++ +LRP++ ++ MW YLKKVY+Q N ARRFQLE  +     GS++IQ++YS+F  LW+EY D+V   V    L  +Q++H T++RDQFLMKLR ++E VRS+L+NR+PVPS+D C GEL REEQRL TQ  ++Q   +S    VAY AQG+   G  M   N+QC+ CK +GH+A  C KKFC+YCKK GH IK+C IRP  +   A+  SV      + ++P+   S          TPEM+Q+++++A ST+G  GN ++  K WY DS ASNHMT+    L +V+ Y G   IQTA+G+SLPI A+GD S+    VF++P+LSTNLISVGQLVDNNC V FS +GC VQDQV+GK IAKGPKVGRLFPL LP P   S   S  +  CNN      VWH+RLGHPN+ +LS +L S L GNK   S +   + C SCKLGKSKTLPFP   S  +  F+L+H+DVWG+SPV SH+ +KY+VTFIDD SR+TWVYFLR KSEVF+ F  F A ++ QFS  I+ L++DSGGEY S EFQ+FL + GII QRSCPSTPQQNGVAERKNRHLLDVVR LL+ES VPS FW EAL TA +LINRLPS  L+ ESPY RL+   P Y  L IFGCVCFVHL PHER+KL+AQSV+CAFLGY   Q GF+CYDP   R R+SRNVIFFENQ FF        +  T  LPS      F +    S RF+PG VY RR+ P +++ A     P  +   S   P VRRSSR S PP+RYG+       +  A++T LS   IPTCY  A +H+CW+QAM+ E+ AL  NHTWD+   PP + P+G KWVYS+K++SDGSLDRYKARLVALGN QEYG+NYEETFAPVAKMTTVRTILA+A+S  WPLHQMDVKN FL+GDLKE IYMK P G+     + VC+LR +LYGL+Q+PR WF+KFR TL+ FSF QS+YD+SLF  K+  G+V LLVYVDDI+ITGSD+ L+ +LK  L  +F MKDLG L YFLGLEVH    GI LNQHKY  DL+  AGL+ AT+VDTPME+NVK RK+EG+LL +P LYR+LVGSL+YLTITRPDIS+AV  VS+F+Q+PRHLHL AV+RIIRY+ G+ TRGLFF  ++   L AYSDADWAGC DTRRS TGWC FLGDALISWK KKQD VSKSSTE+EYRAMS AC+EI+WLRGLL+EL  S+ +PTPLHADN SAIQI +NPV+HERTKHIEVDCH IR+AF   VI LPH+S
Sbjct:   14 NYSTWAFQFELFLKGKDLWGHIDGTDVEKPSTFDKSQDVGTSHSWAVLDARIMSWLLGLVEPHIVTHLRPHRFAQSMWAYLKKVYHQDNDARRFQLEHAIAMFQHGSLSIQDYYSAFLTLWHEYADLVTADVPITALSTIQTIHATTRRDQFLMKLRPEYESVRSSLLNRSPVPSLDICFGELLREEQRLSTQAILEQSHGSSGTTTVAYAAQGR---GPPMHSKNLQCFCCKEYGHIAAICPKKFCSYCKKKGHIIKECRIRPQNRQAQAFQTSVIVPPVATHDSPSAACSVPAPPAPDYCTPEMVQRILISALSTMGFQGNNST--KLWYVDSGASNHMTNNPTALCHVRPYAGQSSIQTANGSSLPIAAIGDASSKFTDVFLAPQLSTNLISVGQLVDNNCAVNFSGNGCVVQDQVTGKPIAKGPKVGRLFPLFLPVPDF-SPRSSIKSFACNNVSDLSMVWHRRLGHPNTQILSHVLNSDLPGNKDRYSLS---LECDSCKLGKSKTLPFPLHASRASHCFDLIHSDVWGLSPVSSHEKFKYYVTFIDDHSRFTWVYFLRSKSEVFRTFTEFLAYVDNQFSTSIKTLRTDSGGEYLSTEFQAFLASKGIIHQRSCPSTPQQNGVAERKNRHLLDVVRILLLESSVPSMFWVEALKTATHLINRLPSQVLHMESPYFRLFAKQPSYDHLRIFGCVCFVHLPPHERHKLSAQSVRCAFLGYNMCQKGFVCYDPTLHRTRISRNVIFFENQHFFPVSSSTVSSSSTVVLPSFE--QQFSDLHPVSSRFQPGIVYTRRSRPQSLSVAHPISDPTTLQMQSVAAPSVRRSSRVSVPPNRYGFPSSSSGNSISALTTALSKFDIPTCYSHAAKHDCWRQAMQEEIAALEANHTWDIEPCPPTIVPLGCKWVYSVKVRSDGSLDRYKARLVALGNNQEYGVNYEETFAPVAKMTTVRTILALAASSDWPLHQMDVKNVFLHGDLKECIYMKPPPGLFPSPTSHVCKLRCSLYGLKQAPRAWFEKFRTTLLQFSFRQSKYDTSLFLRKSDMGIVVLLVYVDDIVITGSDSALLGQLKTHLSESFHMKDLGPLTYFLGLEVHHSPSGISLNQHKYASDLVVTAGLQGATSVDTPMELNVKLRKEEGDLLADPSLYRKLVGSLVYLTITRPDISFAVQQVSQFLQTPRHLHLAAVRRIIRYVQGTSTRGLFFLADNSTRLAAYSDADWAGCADTRRSITGWCVFLGDALISWKSKKQDRVSKSSTESEYRAMSLACSEIIWLRGLLAELDFSETDPTPLHADNTSAIQITANPVYHERTKHIEVDCHSIREAFEARVITLPHIS 1340    
BLAST of XM_017385996.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438HQV7 ((Retrovirus-related Pol polyprotein from transposon TNT 1-94 {ECO:0000313|EMBL:RVW86848.1}))

HSP 1 Score: 1560.04 bits (4038), Expect = 0.000e+0
Identity = 782/1333 (58.66%), Postives = 961/1333 (72.09%), Query Frame = 0
 
Query:  163 NYSAWSFQFEILVKGKELWGYVDGTE-SAPDSKEKEKLA----KWKVKDAQIMSWILGSMEPSMILNLRPYKSSKDMWGYLKKVYNQSNAARRFQLELELGQLSQGSMTIQEFYSSFENLWNEYTDIVYESVSAEGLVAVQSVHETSKRDQFLMKLRGDFEPVRSNLMNRNPVPSIDTCIGELFREEQRLMTQTFIDQKSQNSSPIPVAYVAQGKHRGGRDM--SNIQCYSCKGFGHVATNCTKKFCNYCKKAGHTIKDCPIRPPKKSETAYNVSV-----GSSNAPNFGQSS--------VTPEMIQQMIVNAFSTLGISGNKNSAHKPWYFDSAASNHMTSTTVPLNNVQKYKGDLHIQTADGNSLPITAVGDISTSLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGCFVQDQVSGKMIAKGPKVGRLFPL-LPSPSLVSNYVSCNAVDCNNQVWHKRLGHPNSHVLSILLKSGLLGNKVSNSSNTDNIHCASCKLGKSKTLPFPSRKSHTTKAFELVHTDVWGISPVVSHQHYKYFVTFIDDFSRYTWVYFLRYKSEVFKAFQTFHALIETQFSAKIRILQSDSGGEYTSNEFQSFLQNHGIISQRSCPSTPQQNGVAERKNRHLLDVVRTLLIESCVPSHFWCEALSTAVYLINRLPSPTLNNESPYLRLYEDAPDYSDLHIFGCVCFVHLQPHERNKLTAQSVKCAFLGYGGTQNGFLCYDPNTRRIRVSRNVIFFENQSFF-------CTQMTSQLPSIAILPHFPESSAPSQRFKPGHVYHRRTSP-TMAPATLSDAPDPVLPSSNDPPPVRRSSRNSKPPDRYGY------TNPVAMSTTLSPISIPTCYKQAMEHECWQQAMETELQALAENHTWDVVSLPPNVKPIGSKWVYSMKLKSDGSLDRYKARLVALGNKQEYGINYEETFAPVAKMTTVRTILAVASSKSWPLHQMDVKNAFLNGDLKEEIYMKLPHGMAWIAPNKVCRLRRTLYGLRQSPREWFDKFRHTLINFSFTQSQYDSSLFFHKTQEGMVFLLVYVDDIIITGSDTVLISKLKNMLHSTFQMKDLGDLKYFLGLEVHSRDQGIFLNQHKYVRDLIELAGLKEATAVDTPMEVNVKYRKDEGELLPNPYLYRQLVGSLIYLTITRPDISYAVHIVSRFMQSPRHLHLVAVKRIIRYLIGSPTRGLFFPKNSDLHLTAYSDADWAGCPDTRRSTTGWCTFLGDALISWKCKKQDHVSKSSTEAEYRAMSAACAEIVWLRGLLSELGASQINPTPLHADNKSAIQIASNPVFHERTKHIEVDCHYIRDAFTRGVIELPHVS 1460
            NYS W+FQFE+ +KGK+LWG++DGT+   P + +K +       W V DA+IMSW+LGS+EP ++ +LRP+ S++ MW YLKKVY+Q N ARRFQLE  +      S++IQ++YS+F  LW+EY D+V   V    L  +Q++H T++RDQFLMKLR ++E VRS+L+NR+PVPS+D C GEL REEQRL TQ  ++Q   +S    VAY AQG+   G  M   N+QC+ CK +GH+A  C KKFC+YCKK GH IK+C IRP  +   A+  SV      + ++P+   S          TPEM+Q+++++A S +G  GN ++  K  Y DS ASNHMT+    L +V+ Y G   IQTA+G+SLPI A+GD S+    VF++P+LSTNLISVGQLVDNNC V FS +GC VQDQV+GK IAKGPKVGRLFPL LP P                        HPN+ +LS +L S L GNK   S +   + C SCKLGKSKTLPFP   S  +  F+L+H+DVWG SPV SH+ +KY+VTFIDD SR+TWVYFLR KSEVF+ F  F A ++ QFS  I+ L++DSGGEY S EFQ+FL + GII QRSCPSTPQQNGVAERKNRHLLDVVRTLL+ES VPS FW EAL TA +LINRLPS  L+ ESPY RL+   P Y  L IFGCVCFVHL PHER+KL+AQSV+CAFLGY   Q GF+CYDP   R R+SRNVIFFENQ FF        +  T  LPS      F +    S RF+PG VY RR+ P +++ A     P  +   S   P VRRSSR S P +RYG+       +  A++  LS   IPTCY  A +H+CW+QAM+ E+ AL  NHTWD+   PP + P+G KWVYS+K++SDGSLDRYKARLVALGN QEYG+NYEETFAPVAKMTTVRTILA+A+S  WPLHQMDVKNAFL+GDLKE IYMK P G+     + VC+LRR+LYGL+Q+PR WF+KFR TL+ FSF QS+YD+SLF  K+  G+V LLVYVDDI+ITGSD+ L+ +LK  L  +F MKDLG L YFLGLEVH    GI LNQHKY  DL+   GL+ AT+VDTPME+NVK RK+EG+LL +P LYR+LVGSL+YLTITRPDIS+AV  VS+F+Q+PRHLHL AV+RIIRY+ G+ TRGLFFP  +   L AYSDADWAGC DTRRS TGWC FLGDALISWK KKQD VSKSSTE+EYRAMS AC+EI+WL+GLL+EL  S+ +PTPLHADN SAIQI +NPV+HERTKHIEVDCH IR+AF   VI LPH+S
Sbjct:   14 NYSTWAFQFELFLKGKDLWGHIDGTDVEKPSTFDKSQDVGTSHSWAVLDARIMSWLLGSVEPHIVTHLRPHCSAQSMWAYLKKVYHQDNDARRFQLEHAIAMFQHCSLSIQDYYSAFLTLWHEYADLVTADVPIAALSTIQTIHATTRRDQFLMKLRPEYESVRSSLLNRSPVPSLDICFGELLREEQRLSTQAILEQSHGSSGTTTVAYAAQGR---GPPMHSKNLQCFCCKEYGHIAAICPKKFCSYCKKKGHIIKECRIRPQNRQAQAFQTSVIVPPVATHDSPSAACSVPAPPAPDYCTPEMVQRILISALSAMGFQGNNST--KLCYVDSGASNHMTNNPTALCHVRPYAGQSSIQTANGSSLPIAAIGDASSKFTDVFLAPQLSTNLISVGQLVDNNCAVNFSGNGCVVQDQVTGKPIAKGPKVGRLFPLFLPVPDFSPR-------------------HPNTQILSHVLNSDLPGNKDRYSLS---LECDSCKLGKSKTLPFPLHASRASHCFDLIHSDVWGPSPVSSHEKFKYYVTFIDDHSRFTWVYFLRSKSEVFRTFTEFLAYVDNQFSTSIKTLRTDSGGEYLSTEFQAFLASKGIIHQRSCPSTPQQNGVAERKNRHLLDVVRTLLLESSVPSMFWVEALKTATHLINRLPSQVLHMESPYFRLFAKQPSYDHLRIFGCVCFVHLPPHERHKLSAQSVRCAFLGYNMCQKGFVCYDPTLHRTRISRNVIFFENQHFFPVSSSTVSSSSTVVLPSFE--QQFSDLHPVSSRFQPGIVYMRRSCPQSLSVAHPISDPTTLQMQSVAAPSVRRSSRVSVPSNRYGFPSSSSGNSISALTAALSKFDIPTCYSHAAKHDCWRQAMQEEIAALEANHTWDIEPCPPTIVPLGCKWVYSVKVRSDGSLDRYKARLVALGNNQEYGVNYEETFAPVAKMTTVRTILALAASGDWPLHQMDVKNAFLHGDLKECIYMKPPPGLFPSPTSHVCKLRRSLYGLKQAPRAWFEKFRTTLLQFSFRQSKYDTSLFLRKSDMGIVVLLVYVDDIVITGSDSALLGQLKTHLSESFHMKDLGPLTYFLGLEVHHNPFGISLNQHKYASDLVATTGLQGATSVDTPMELNVKLRKEEGDLLADPSLYRKLVGSLVYLTITRPDISFAVQQVSQFLQTPRHLHLAAVRRIIRYVQGTSTRGLFFPAGNSTRLVAYSDADWAGCADTRRSITGWCVFLGDALISWKSKKQDRVSKSSTESEYRAMSLACSEIIWLQGLLAELDFSETDPTPLHADNTSAIQITANPVYHERTKHIEVDCHSIREAFESRVITLPHIS 1317    
BLAST of XM_017385996.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2N9GBC4 (Integrase catalytic domain-containing protein {ECO:0000259|PROSITE:PS50994})

HSP 1 Score: 1551.95 bits (4017), Expect = 0.000e+0
Identity = 782/1321 (59.20%), Postives = 962/1321 (72.82%), Query Frame = 0
 
Query:  162 KNYSAWSFQFEILVKGKELWGYVDGTESAPDSKEKEKLAKWKVKDAQIMSWILGSMEPSMILNLRPYKSSKDMWGYLKKVYNQSNAARRFQLELELGQL-SQGSMTIQEFYSSFENLWNEYTDIVYESVSAEGLVAVQSVHETSKRDQFLMKLRGDFEPVRSNLMNRNPVPSIDTCIGELFREEQRLMTQTFIDQKSQNSSPIPVAYVAQGKHRGGRDMSNIQCYSCKGFGHVATNCTKKFCNYCKKAGHTIKDCPIRPPKKSETAYNVSVGSSNAPNFGQ-----------SSVTPEMIQQMIVNAFSTLGISGNKNSAHKPWYFDSAASNHMTSTTVPLNNVQKYKGDLHIQTADGNSLPITAVGDISTSLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGCFVQDQVSGKMIAKGPKVGRLFPL-LPSPSLVSNYVS--CNAVDCNNQVWHKRLGHPNSHVLSILLKSGLLGNKVSNSSNTDNIHCASCKLGKSKTLPFPSRKSHTTKAFELVHTDVWGISPVVSHQHYKYFVTFIDDFSRYTWVYFLRYKSEVFKAFQTFHALIETQFSAKIRILQSDSGGEYTSNEFQSFLQNHGIISQRSCPSTPQQNGVAERKNRHLLDVVRTLLIESCVPSHFWCEALSTAVYLINRLPSPTLNNESPYLRLYEDAPDYSDLHIFGCVCFVHLQPHERNKLTAQSVKCAFLGYGGTQNGFLCYDPNTRRIRVSRNVIFFENQSFFCTQMTSQLPSIAILPHFPES----SAPSQRFKPGHVYHRRTSPTMAPATLSDAPDPVLPSSNDPPPVRRSSRNSKPPDRYGY----TNPVAMSTTLSPISIPTCYKQAMEHECWQQAMETELQALAENHTWDVVSLPPNVKPIGSKWVYSMKLKSDGSLDRYKARLVALGNKQEYGINYEETFAPVAKMTTVRTILAVASSKSWPLHQMDVKNAFLNGDLKEEIYMKLPHGMAWIAPNKVCRLRRTLYGLRQSPREWFDKFRHTLINFSFTQSQYDSSLFFHKTQEGMVFLLVYVDDIIITGSDTVLISKLKNMLHSTFQMKDLGDLKYFLGLEVHSRDQGIFLNQHKYVRDLIELAGLKEATAVDTPMEVNVKYRKDEGELLPNPYLYRQLVGSLIYLTITRPDISYAVHIVSRFMQSPRHLHLVAVKRIIRYLIGSPTRGLFFPKNSDLHLTAYSDADWAGCPDTRRSTTGWCTFLGDALISWKCKKQDHVSKSSTEAEYRAMSAACAEIVWLRGLLSELGASQINPTPLHADNKSAIQIASNPVFHERTKHIEVDCHYIRDAFTRGVIELPHV 1459
            KNY+AW FQ E  +KGK LWG++DG+     S+  +     K    QIMSWILGSMEP +IL+LRP++S+K MW YLK+VY+Q N ARRF LEL +    S+G +T                      VSAEGL +VQ VH TS+RDQFLMKLR +FE +R++L+NR+PVP+++ C GEL REEQRL TQ  ++Q    S+ + VAY A GK +G RDMS                            GH IK+C IRP  +S  AY+  V   + P                S+T EM+Q+MIV+AFS LG  G  +S    W  DS ASNHMT++   L+NV++Y G  HIQTA+G++LPI AVGD+S+SL  V VSP LS NL+SVGQLVD N  V F++ GC VQDQ+SG++IAKGPK GRLF L +P+P  +  ++S  CN    + +VWHKRLGHPNS +LS LLKSGLL NK   SS   +  CA+CKLGKSK LPFPS  S  T +FE++H+DVWGISP +SH  YKYFVTFIDD+S+YTWVYFLR+KSEVF  F+ F AL++TQFSA ++IL+SDSGGEY S+EFQSFL + GIISQRSCP TPQQNGVAERKNRHLLDVVRTLLIES VP  FW EAL+TA +LINRLPS  LN ESPY RLY   P Y++LH FGCVCF+HL P +RNKL+AQS++CAFLGY  TQ G++CYDP + R+RVSRNV+FFENQ FF    +S+ P +A LP F ++      P +RF+PG VY RR SP + P+       P+LP    P P+RRSSR S PPDRYG+    T   A+S TLS I++PT Y QA++ +CWQQAM+ EL AL  N TWDV+  P  V P+G KWVYS+K+KSDGSLDRYKARLVALGN QEYG+NYEETFAPVAKMTT+RTILA+A+S++W LHQMDVKNAFL+GDLKE++YM+ P G+     + VC+LRR+LYGL+Q+PR W++KF  TL  F+  +S+YD+SLF  KT+ G+V LLVYVDDIIITG+D+ LIS+LK  L  +F MKDLG L YFLGLE+ +   GIFL+QHKY +DL+  AGL+++T +DTPME+N+K RK+EG+LL +P  YR LVGSL+YLTITRPDISYAV  VS+FM SPRHLH+ AV+RIIRY+ G+  RGL +P  + L L AYSDAD+AGC DTRRSTTGWC FLG ALISWK KKQD VSKSSTE+EYRAMS ACAEI+WLRGLL+ELG S   PT LHADN SAI I++NP+FHERTKHIEVDCH+IR+AF    I LPHV
Sbjct:   14 KNYTAWEFQLETFLKGKALWGHIDGSSKGGSSEADKAAWAAKDN--QIMSWILGSMEPHLILSLRPHRSAKAMWDYLKQVYHQDNNARRFHLELAIANYTSRGFIT---------------------KVSAEGLASVQHVHRTSQRDQFLMKLRPEFESIRASLVNRDPVPTLEACFGELLREEQRLNTQNLMEQSRIASNTVSVAYAAHGKGKG-RDMSTTH------------------------RGHIIKECTIRP-SRSTKAYHAVVTDDSQPAANAVSSAVVLQPPAPSLTREMVQEMIVSAFSALGFQGTGSSP--SWILDSGASNHMTNSLHGLSNVREYCGSSHIQTANGSALPIVAVGDVSSSLKDVLVSPNLSVNLVSVGQLVDQNYGVNFTHDGCVVQDQMSGQVIAKGPKHGRLFSLQIPAPRNLPPFLSLLCNKSRVSPEVWHKRLGHPNSRILSYLLKSGLLNNKEHFSSAVFS-DCATCKLGKSKILPFPSEGSRATHSFEIIHSDVWGISPTISHAQYKYFVTFIDDYSKYTWVYFLRHKSEVFPMFKLFLALVQTQFSATVKILRSDSGGEYMSHEFQSFLHSKGIISQRSCPYTPQQNGVAERKNRHLLDVVRTLLIESSVPPKFWVEALTTATFLINRLPSQALNLESPYFRLYHHHPTYTNLHTFGCVCFMHLPPPDRNKLSAQSIRCAFLGYSVTQKGYVCYDPTSNRVRVSRNVLFFENQWFFPMSSSSESP-VAFLPSFDDTLHDPRPPIERFQPGMVYQRR-SPVLPPSA------PILP----PVPLRRSSRVSAPPDRYGFPLTGTTSSALSATLSSIAVPTSYSQAVKEKCWQQAMQEELCALEANKTWDVIDCPAGVTPLGCKWVYSIKVKSDGSLDRYKARLVALGNNQEYGVNYEETFAPVAKMTTIRTILAIAASQNWDLHQMDVKNAFLHGDLKEDVYMRPPAGLLSTPTSAVCKLRRSLYGLKQAPRAWYEKFTSTLFKFALHKSKYDASLFLRKTENGVVILLVYVDDIIITGTDSALISQLKQYLQDSFHMKDLGSLTYFLGLEITTGAHGIFLSQHKYAQDLVAAAGLQDSTPLDTPMELNLKLRKEEGDLLSDPVSYRTLVGSLVYLTITRPDISYAVQQVSQFMASPRHLHMAAVRRIIRYVHGTALRGLSYPAGTSLDLAAYSDADYAGCSDTRRSTTGWCMFLGPALISWKSKKQDRVSKSSTESEYRAMSQACAEILWLRGLLTELGFSPRGPTSLHADNTSAIHISANPIFHERTKHIEVDCHFIREAFEAQTISLPHV 1270    
BLAST of XM_017385996.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2N9IA16 ((Uncharacterized protein {ECO:0000313|EMBL:SPD21512.1}))

HSP 1 Score: 1549.64 bits (4011), Expect = 0.000e+0
Identity = 778/1321 (58.89%), Postives = 960/1321 (72.67%), Query Frame = 0
 
Query:  162 KNYSAWSFQFEILVKGKELWGYVDGTESAPDSKEKEKLAKWKVKDAQIMSWILGSMEPSMILNLRPYKSSKDMWGYLKKVYNQSNAARRFQLELELGQL-SQGSMTIQEFYSSFENLWNEYTDIVYESVSAEGLVAVQSVHETSKRDQFLMKLRGDFEPVRSNLMNRNPVPSIDTCIGELFREEQRLMTQTFIDQKSQNSSPIPVAYVAQGKHRGGRDMSNIQCYSCKGFGHVATNCTKKFCNYCKKAGHTIKDCPIRPPKKSETAYNVSVGSSNAPNFG-----------QSSVTPEMIQQMIVNAFSTLGISGNKNSAHKPWYFDSAASNHMTSTTVPLNNVQKYKGDLHIQTADGNSLPITAVGDISTSLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGCFVQDQVSGKMIAKGPKVGRLFPL-LPSPSLVSNYVS--CNAVDCNNQVWHKRLGHPNSHVLSILLKSGLLGNKVSNSSNTDNIHCASCKLGKSKTLPFPSRKSHTTKAFELVHTDVWGISPVVSHQHYKYFVTFIDDFSRYTWVYFLRYKSEVFKAFQTFHALIETQFSAKIRILQSDSGGEYTSNEFQSFLQNHGIISQRSCPSTPQQNGVAERKNRHLLDVVRTLLIESCVPSHFWCEALSTAVYLINRLPSPTLNNESPYLRLYEDAPDYSDLHIFGCVCFVHLQPHERNKLTAQSVKCAFLGYGGTQNGFLCYDPNTRRIRVSRNVIFFENQSFFCTQMTSQLPSIAILPHFPESSAPS----QRFKPGHVYHRRTSPTMAPATLSDAPDPVLPSSNDPPPVRRSSRNSKPPDRYGY----TNPVAMSTTLSPISIPTCYKQAMEHECWQQAMETELQALAENHTWDVVSLPPNVKPIGSKWVYSMKLKSDGSLDRYKARLVALGNKQEYGINYEETFAPVAKMTTVRTILAVASSKSWPLHQMDVKNAFLNGDLKEEIYMKLPHGMAWIAPNKVCRLRRTLYGLRQSPREWFDKFRHTLINFSFTQSQYDSSLFFHKTQEGMVFLLVYVDDIIITGSDTVLISKLKNMLHSTFQMKDLGDLKYFLGLEVHSRDQGIFLNQHKYVRDLIELAGLKEATAVDTPMEVNVKYRKDEGELLPNPYLYRQLVGSLIYLTITRPDISYAVHIVSRFMQSPRHLHLVAVKRIIRYLIGSPTRGLFFPKNSDLHLTAYSDADWAGCPDTRRSTTGWCTFLGDALISWKCKKQDHVSKSSTEAEYRAMSAACAEIVWLRGLLSELGASQINPTPLHADNKSAIQIASNPVFHERTKHIEVDCHYIRDAFTRGVIELPHV 1459
            KNY+AW FQ E  +KGK LWG++DG+     S+  +     K    QIMSWILGSMEP +IL+LRP++S+K MW YLK+VY+Q N ARRF LEL +    S+G +T                      VSAEGL +VQ VH TS+RDQFLMKLR +FE +R++L+NR+PVP+++ C GEL REEQRL TQ  ++Q    S+ + VAY A GK + GRDMS  QCYSCK +GH+A NC +KFCNYCK+ GH IK+C IR P +S  AY+  V   + P                S+T EM+Q+MIV+AFS LG  G  +S    W  DS ASNHMT++   L+NV++Y G  HIQTA+                             +SVGQLVD +  V F++ GC VQDQ+SG++IAKGPK GRLF L +P+P  +  ++S  CN    + +VWHKRLGHPNS +LS LLKSGLL NK   SS   +  CA+CKLGKSK LPFPS  S  T +FE++H+DVWGISP +SH  YKYFVTFIDD+S+YTWVYFLR+KSEVF  F+ F AL++TQFSA ++IL+SDSGGEY S+EFQSFL + GIISQRSCP TPQQNGVAERKNRHLLDVVRTLLIES VP  FW EAL+TA +LINRLPS  LN ESPY RLY   P Y++LH FGCVCF+HL P +RNKL+AQS++CAFLGY  TQ G++CYDP + R+RVSRNV+FFENQ FF    +S+ P +A LP F ++        +RF+PG VY RR SP + P+       P+LP    P P+RRSSR S PPDRYG+    T   A+S TLS I++PT Y QA++ +CWQQAM+ EL AL  N TWDV+  P  V P+G KWVYS+K+KSDGSLDRYKARLVALGN QEYG+NYEETFAPVAKMTT+RTILA+A+S++W LHQMDVKNAFL+GDLKE++YM+ P G+     + VC+LRR+LYGL+Q+PR W++KF  TL  F+  +S+YD+SLF  KT+ G+V LLVYVDDIIITG+D+ LIS+LK  L  +F MKDLG L YFLGLE+ +   GIFL+QHKY +DL+  AGL+++T +DTPME+N+K RK+EG+LL +P  YR LVGSL+YLTITRPDISYAV  VS+FM SPRHLH+ AV+RIIRY+ G+  RGL +P  + L L AYSDAD+AGC DTRRSTTGWC FLG ALISWK KKQD VSKSSTE+EYRAMS ACAEI+WLRGLL+ELG S   PT LHADN SAI I++NP+FHERTKHI+VDCH+IR+AF    I LPHV
Sbjct:   14 KNYTAWEFQLETFLKGKALWGHIDGSSKGGSSEADKAAWAAKDN--QIMSWILGSMEPHLILSLRPHRSAKAMWDYLKQVYHQDNNARRFHLELAIANYTSRGFIT---------------------KVSAEGLASVQHVHRTSQRDQFLMKLRPEFESIRASLVNRDPVPTLEACFGELLREEQRLNTQNLMEQSRIASNTVSVAYAAHGKGK-GRDMSTTQCYSCKKYGHIAPNCPQKFCNYCKQPGHIIKECTIR-PSRSTKAYHAVVTDDSQPAANAVSSAVVLQPPAPSLTREMVQEMIVSAFSALGFQGTGSSP--SWILDSGASNHMTNSLHGLSNVREYCGSSHIQTAN-----------------------------VSVGQLVDQDYGVNFTHDGCVVQDQMSGQVIAKGPKHGRLFSLQIPAPRNLPPFLSLLCNKSRVSPEVWHKRLGHPNSRILSYLLKSGLLNNKEHFSSAVFS-DCATCKLGKSKILPFPSEGSRATHSFEIIHSDVWGISPTISHAQYKYFVTFIDDYSKYTWVYFLRHKSEVFPMFKLFLALVQTQFSATVKILRSDSGGEYMSHEFQSFLHSKGIISQRSCPYTPQQNGVAERKNRHLLDVVRTLLIESSVPPKFWVEALTTATFLINRLPSQALNLESPYFRLYHHHPTYTNLHTFGCVCFMHLPPPDRNKLSAQSIRCAFLGYSVTQKGYVCYDPTSNRVRVSRNVLFFENQWFFPMSSSSESP-VAFLPSFDDTLHDPRPLIERFQPGMVYQRR-SPVLPPSA------PILP----PVPLRRSSRVSAPPDRYGFPLTGTTSSALSATLSSIAVPTSYSQAVKEKCWQQAMQEELCALEANKTWDVIDCPAGVTPLGCKWVYSIKVKSDGSLDRYKARLVALGNNQEYGVNYEETFAPVAKMTTIRTILAIAASQNWDLHQMDVKNAFLHGDLKEDVYMRPPAGLLSTPTSAVCKLRRSLYGLKQAPRAWYEKFTSTLFKFALHKSKYDASLFLRKTENGVVILLVYVDDIIITGTDSALISQLKQYLQDSFHMKDLGSLTYFLGLEITTGAHGIFLSQHKYAQDLVAAAGLQDSTPLDTPMELNLKLRKEEGDLLSDPVSYRTLVGSLVYLTITRPDISYAVQQVSQFMASPRHLHMAAVRRIIRYVHGTALRGLSYPAGTSLDLAAYSDADYAGCSDTRRSTTGWCMFLGPALISWKSKKQDRVSKSSTESEYRAMSQACAEILWLRGLLTELGFSPRGPTSLHADNTSAIHISANPIFHERTKHIKVDCHFIREAFEAQTISLPHV 1265    
BLAST of XM_017385996.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438D4F0 ((Retrovirus-related Pol polyprotein from transposon TNT 1-94 {ECO:0000313|EMBL:RVW30311.1}))

HSP 1 Score: 1547.33 bits (4005), Expect = 0.000e+0
Identity = 779/1337 (58.26%), Postives = 958/1337 (71.65%), Query Frame = 0
 
Query:  163 NYSAWSFQFEILVKGKELWGYVDGTE-SAPDSKEKEKLA----KWKVKDAQIMSWILGSMEPSMILNLRPYKSSKDMWGYLKKVYNQSNAARRFQLELELGQLSQGSMTIQEFYSSFENLWNEYTDIVYESVSAEGLVAVQSVHETSKRDQFLMKLRGDFEPVRSNLMNRNPVPSIDTCIGELFREEQRLMTQTFIDQKSQNSSPIPVAYVAQGKHRGGRDM--SNIQCYSCKGFGHVATNCTKKFCNYCKKAGHTIKDCPIRPPKKSETAYNVSV-----GSSNAPNFGQSS--------VTPEMIQQMIVNAFSTLGISGNKNSAHKPWYFDSAASNHMTSTTVPLNNVQKYKGDLHIQTADGNSLPITAVGDISTSLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGCFVQDQVSGKMIAKGPKVGRLFPL-LP----SPSLVSNYVSCNAVDCNNQVWHKRLGHPNSHVLSILLKSGLLGNKVSNSSNTDNIHCASCKLGKSKTLPFPSRKSHTTKAFELVHTDVWGISPVVSHQHYKYFVTFIDDFSRYTWVYFLRYKSEVFKAFQTFHALIETQFSAKIRILQSDSGGEYTSNEFQSFLQNHGIISQRSCPSTPQQNGVAERKNRHLLDVVRTLLIESCVPSHFWCEALSTAVYLINRLPSPTLNNESPYLRLYEDAPDYSDLHIFGCVCFVHLQPHERNKLTAQSVKCAFLGYGGTQNGFLCYDPNTRRIRVSRNVIFFENQSFF-------CTQMTSQLPSIAILPHFPESSAPSQRFKPGHVYHRRTSP-TMAPATLSDAPDPVLPSSNDPPPVRRSSRNSKPPDRYGY------TNPVAMSTTLSPISIPTCYKQAMEHECWQQAMETELQALAENHTWDVVSLPPNVKPIGSKWVYSMKLKSDGSLDRYKARLVALGNKQEYGINYEETFAPVAKMTTVRTILAVASSKSWPLHQMDVKNAFLNGDLKEEIYMKLPHGMAWIAPNKVCRLRRTLYGLRQSPREWFDKFRHTLINFSFTQSQYDSSLFFHKTQEGMVFLLVYVDDIIITGSDTVLISKLKNMLHSTFQMKDLGDLKYFLGLEVHSRDQGIFLNQHKYVRDLIELAGLKEATAVDTPMEVNVKYRKDEGELLPNPYLYRQLVGSLIYLTITRPDISYAVHIVSRFMQSPRHLHLVAVKRIIRYLIGSPTRGLFFPKNSDLHLTAYSDADWAGCPDTRRSTTGWCTFLGDALISWKCKKQDHVSKSSTEAEYRAMSAACAEIVWLRGLLSELGASQINPTPLHADNKSAIQIASNPVFHERTKHIEVDCHYIRDAFTRGVIELPHVS 1460
            NYS W+FQFE+ +KGK+LWG++DGT+   P + EK +       W V DA+IMSW+LGS+EP ++ +LRP++S++ MW YLKKVY+Q N ARRFQLE  +     GS++IQ++YS+F  LW+EY D+V   V    L  +Q++H T++RDQFLMKLR ++E VRS+L+NR+PVPS+D C GEL REEQRL TQ  ++Q   +S    VAY  QG+   G  M   N+QC+ CK +GH+A  C KKFC+YCKK GH IK+C IRP  +   A+  SV      + ++P+   S          TPEM+Q+++++A S +G  GN ++  K WY DS ASNHMT+    L +V+ Y G   IQTA+G+SLPI A+GD S+    VF++P+LSTNLIS                     DQV+GK IAKGPKVGRLFPL LP    SP       +CN V   + VWH+RLGHPN+ +LS +L S L GNK   S +   + C SCKLGKSKTLPFP   S  +  F+L+H+DVWG SPV SH+ +KY+VTFIDD SR+TWVYFLR KSEVF  F  F A ++ QFS  I+ L++DSGGEY S EFQ+FL + GII QRSCPSTPQQNGVAE KNRHLLDVVRTLL+ES VPS FW EAL TA +LINRLPS  L+ ESPY RL+   P Y  L IFGCVCFVHL PHER+KL+AQSV+CAFLGY   Q GF+CYDP   R R+SRNVIFFENQ FF        +  T  LPS      F +    S RF+PG VY RR+ P +++ A     P  +   S   P VRRSSR S PP+RYG+       +  A++  LS   IPTCY  A +H+CW+QAM+ E+ AL  NHTWD+   PP + P+G KWVYS+K++SDGSLDRYKARLVALGN QEYG+NYEETFAPVAKMTTVRTILA+A+S  WPLHQMDVKNAFL+GDLKE IYMK P G+     + VC+LRR+LYGL+Q+PR WF+KFR TL+ FSF QS+YD+SLF  K+  G+V LLVYVDDI+ITGSD  L+ +LK  L  +F MKDLG L YFLGLEVH    GI LNQHKY  DL+  AGL+ AT+VDTPME+NVK RK+EG+LL +P LYR+LVGSL+YLTITRPDIS+AV  VS+F+Q+PRHLHL AV+RIIRY+ G+ TRGLFFP  +   L AYSDADWAGC DTRRS TGWC FLGDALISWK KKQD VSKSSTE+EYRAMS AC+EI+WLRG+L+EL  S+ +PTPLHADN SAIQI +NPV+HERTKHIEVDCH IR+AF   VI LPH+S
Sbjct:  378 NYSTWAFQFELFLKGKDLWGHIDGTDVEKPSTFEKSQDVGFSPSWAVLDARIMSWLLGSVEPHIVTHLRPHRSAQSMWAYLKKVYHQDNDARRFQLEHAIAMFQHGSLSIQDYYSAFLTLWHEYADLVTADVPIAALSTIQAIHATTRRDQFLMKLRPEYESVRSSLLNRSPVPSLDICFGELLREEQRLSTQAILEQSHGSSGTTTVAYATQGR---GPPMHSKNLQCFCCKEYGHIAATCPKKFCSYCKKKGHIIKECRIRPQNRQAQAFQTSVIVPPVATHDSPSAACSVPAPPAPDYCTPEMVQRILISALSAMGFQGNNST--KLWYVDSGASNHMTNNPTALCHVRPYAGQSSIQTANGSSLPIAAIGDASSKFTDVFLAPQLSTNLIS---------------------DQVTGKPIAKGPKVGRLFPLFLPIPDFSPRSSIKSFACNNVSDLSMVWHRRLGHPNTQILSHVLNSDLPGNKDRYSLS---LECDSCKLGKSKTLPFPLHASRASHCFDLIHSDVWGPSPVSSHEKFKYYVTFIDDHSRFTWVYFLRSKSEVFCTFTEFLAYVDNQFSTSIKTLRTDSGGEYLSTEFQAFLASKGIIHQRSCPSTPQQNGVAECKNRHLLDVVRTLLLESSVPSMFWVEALKTATHLINRLPSQVLHMESPYFRLFAKQPSYDHLRIFGCVCFVHLPPHERHKLSAQSVRCAFLGYNMCQKGFVCYDPTLHRTRISRNVIFFENQHFFPVSSSTVSSSSTVVLPSFE--QQFSDLHPVSSRFQPGIVYTRRSHPQSLSVAHPISDPTTLQMQSVAAPSVRRSSRVSVPPNRYGFPSSSSGNSISALTAALSKFDIPTCYSHAAKHDCWRQAMQEEIAALEANHTWDIEPCPPTIVPLGCKWVYSVKVRSDGSLDRYKARLVALGNNQEYGVNYEETFAPVAKMTTVRTILALAASSDWPLHQMDVKNAFLHGDLKECIYMKPPPGLFPSPTSHVCKLRRSLYGLKQAPRAWFEKFRTTLLQFSFRQSKYDTSLFLRKSDMGIVVLLVYVDDIVITGSDFALLGQLKTHLSESFHMKDLGPLTYFLGLEVHHSPSGISLNQHKYASDLVATAGLQGATSVDTPMELNVKLRKEEGDLLADPSLYRKLVGSLVYLTITRPDISFAVQQVSQFLQTPRHLHLAAVRRIIRYVQGTSTRGLFFPSGNSTRLAAYSDADWAGCADTRRSITGWCVFLGDALISWKSKKQDRVSKSSTESEYRAMSLACSEIIWLRGMLAELDFSETDPTPLHADNTSAIQITANPVYHERTKHIEVDCHSIREAFEARVITLPHIS 1683    
BLAST of XM_017385996.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A396JXQ9 ((Putative RNA-directed DNA polymerase {ECO:0000313|EMBL:RHN82322.1}) (2.7.7.49 {ECO:0000313|EMBL:RHN82322.1}))

HSP 1 Score: 1539.63 bits (3985), Expect = 0.000e+0
Identity = 756/1315 (57.49%), Postives = 945/1315 (71.86%), Query Frame = 0
 
Query:  162 KNYSAWSFQFEILVKGKELWGYVDGTESAPDSKEKEKLAKWKVKDAQIMSWILGSMEPSMILNLRPYKSSKDMWGYLKKVYNQSNAARRFQLELELGQLSQGSMTIQEFYSSFENLWNEYTDIVYESVSAEGLVAVQSVHETSKRDQFLMKLRGDFEPVRSNLMNRNPVPSIDTCIGELFREEQRLMTQTFIDQKSQNSSPIPVAYVAQGKHRGGRDMSNIQCYSCKGFGHVATNCTKKFCNYCKKAGHTIKDCPIRPPKKSE---TAYNVSVGSSNAPNFGQSS----VTPEMIQQMIVNAFSTLGISGNKNSAHKPWYFDSAASNHMTSTTVPLNNVQKYKGDLHIQTADGNSLPITAVGDISTSLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGCFVQDQVSGKMIAKGPKVGRLFPLLPSPSLVSNYVS--CNAVDCNNQVWHKRLGHPNSHVLSILLKSGLLGNKVSNSSNTDNIHCASCKLGKSKTLPFPSRKSHTTKAFELVHTDVWGISPVVSHQHYKYFVTFIDDFSRYTWVYFLRYKSEVFKAFQTFHALIETQFSAKIRILQSDSGGEYTSNEFQSFLQNHGIISQRSCPSTPQQNGVAERKNRHLLDVVRTLLIESCVPSHFWCEALSTAVYLINRLPSPTLNNESPYLRLYEDAPDYSDLHIFGCVCFVHLQPHERNKLTAQSVKCAFLGYGGTQNGFLCYDPNTRRIRVSRNVIFFENQSFFCTQMTSQLPSIAILPHFPESSAPSQRFKPGHVYHR---RTSPTMAPATLSDAPDPVLPSSNDPPPVRRSSRNSKPPDRYG----YTNPVAMSTTLSPISIPTCYKQAMEHECWQQAMETELQALAENHTWDVVSLPPNVKPIGSKWVYSMKLKSDGSLDRYKARLVALGNKQEYGINYEETFAPVAKMTTVRTILAVASSKSWPLHQMDVKNAFLNGDLKEEIYMKLPHGMAWIAPNKVCRLRRTLYGLRQSPREWFDKFRHTLINFSFTQSQYDSSLFFHKTQEGMVFLLVYVDDIIITGSDTVLISKLKNMLHSTFQMKDLGDLKYFLGLEVHSRDQGIFLNQHKYVRDLIELAGLKEATAVDTPMEVNVKYRKDEGELLPNPYLYRQLVGSLIYLTITRPDISYAVHIVSRFMQSPRHLHLVAVKRIIRYLIGSPTRGLFFPKNSDLHLTAYSDADWAGCPDTRRSTTGWCTFLGDALISWKCKKQDHVSKSSTEAEYRAMSAACAEIVWLRGLLSELGASQINPTPLHADNKSAIQIASNPVFHERTKHIEVDCHYIRDAFTRGVIELPHVS 1460
            KNY AW FQF + VKG +LW ++D    AP   EK  L +W+ KDAQI+SWIL S++P MI NLR + ++++MW YLK++YNQ NAA+RFQLELE+    QG++ +QEFYS F NLW E++ I++  V    L AVQ V+ TS+RDQFLMKLR +FE VR  L+NRNPVPS+DTC+GEL REEQRL+TQ  +   +  S P+PVAY AQ + +G RDM  +QC++CK FGHVA +CT KFC YCK+ GH I DCPIRPP++++    A + +  S+  P    +S    + PEMIQQM++ A S +GI G  ++  +PW+ DS ASNHMT ++  L+N+  Y G+  IQ ADGN L IT VGDI++    V VSP L++NL+S                     +QVSGK+IAKGPKVGRLFPL      +S+++S  CN V  + + WH++LGHPNS VLS L K+GLLGNK      T +I C  CKL KSKTLPFPS     +  FE++H+DVWG+SP+ SH HYKYFVTFIDD+SR+TW+YFLR KSEVF  F+ F   +ETQF A ++I +S+SGGEY S+EFQ +LQ+ GI+SQRSCP+TPQQNG+AERKNRHLLDV R+LL+++ VP  FW EALST                              DLH FGCVCFVHL   ER+KL AQSV+CAF+GY  +  GF+CYD +  R+RVSRNV FF+NQ  F + ++  +  IAILP+F       +R+KPG  Y R   +  PT AP+      D   P   +P   RRS R S+ PDR+      +   +++ +LS ISIPTCY QA++   W +AM  ELQAL E+ TWD+VS PP++KPIG KWVYS+KL SDGSL+RYKARLVALGNKQEYGI+Y+ETFAPVAKMTTVRTIL++A+S  W LHQMDVKNAFL+GDL E+IYM  P G+ + +   VC+L+R+LYGL+Q+PR W++KFR TL+ FSF QSQYDSSLF H T  G+V LL+YVDD++ITGSD   I +LK  LH++F MKDLG+L YFLGLEVH+  +GIFL+QHKY  DLI +AGL+ A  VDTP+EVNVKY +D+G+LLP+P LYRQLVGSL YLTITRPDIS+AV  VS+FM SPRHLHL AV RIIRYL GS  RGLFF   +   L+AYSDADWAGCP+TRRS TGWC FLG +LISWK KKQ  VSKSSTE+EYRAMSAAC+EI+WLRGLL+ELG  Q  PT L+ADN SAIQI +NPVFHERTKHIEVDCH IRDA+   +I LPHVS
Sbjct:   16 KNYPAWEFQFRMYVKGNKLWSHLDDVSKAP--TEKAALEEWEYKDAQIISWILSSIDPQMINNLRSFSTAQEMWNYLKRIYNQDNAAKRFQLELEIANYKQGNLYVQEFYSGFLNLWTEHSAIIHADVPKASLAAVQEVYNTSRRDQFLMKLRPEFEVVRGALLNRNPVPSLDTCVGELLREEQRLLTQGTMSHDAFISEPVPVAYAAQSRGKG-RDMRQVQCFTCKQFGHVARSCTAKFCKYCKQNGHVIFDCPIRPPRRTQYPTQALHATTSSAAPPTITSASDGGSLQPEMIQQMVLAALSNMGIHGKSSNVSRPWFLDSGASNHMTGSSEYLHNLHSYHGNQQIQIADGNKLSITDVGDINSDFQDVLVSPGLASNLLS---------------------EQVSGKVIAKGPKVGRLFPL----QFISSHLSLACNNVLNSYEDWHRKLGHPNSTVLSHLFKTGLLGNK--QVVCTASISCPVCKLAKSKTLPFPSGAHRASNCFEMIHSDVWGMSPIASHAHYKYFVTFIDDYSRFTWIYFLRSKSEVFSMFKKFLTYVETQFQASVKIFRSNSGGEYMSHEFQEYLQHKGILSQRSCPNTPQQNGLAERKNRHLLDVTRSLLLQASVPPRFWVEALSTV-----------------------------DLHTFGCVCFVHLPLFERHKLGAQSVQCAFMGYSNSHKGFVCYDVSNHRLRVSRNVTFFDNQFMFHS-ISPDINDIAILPNFSIMPQSIERYKPGFTYVRQRIKQVPT-APS------DTEPPPDPEPVEPRRSGRTSRAPDRFSPDRYDSKHTSLTASLSSISIPTCYSQAVKDVRWIKAMNEELQALQESFTWDIVSCPPDIKPIGCKWVYSVKLNSDGSLNRYKARLVALGNKQEYGIDYDETFAPVAKMTTVRTILSIAASNGWSLHQMDVKNAFLHGDLTEDIYMTPPQGL-FSSSKGVCKLKRSLYGLKQAPRAWYEKFRSTLLGFSFCQSQYDSSLFIHSTSTGIVLLLLYVDDMVITGSDNASIQRLKEQLHASFHMKDLGNLHYFLGLEVHATSKGIFLHQHKYATDLISMAGLQSANQVDTPLEVNVKYHRDDGDLLPDPLLYRQLVGSLNYLTITRPDISFAVQQVSQFMHSPRHLHLAAVHRIIRYLKGSSHRGLFFSIGNSPKLSAYSDADWAGCPNTRRSVTGWCMFLGSSLISWKSKKQARVSKSSTESEYRAMSAACSEIIWLRGLLAELGFPQTEPTSLYADNTSAIQIVANPVFHERTKHIEVDCHSIRDAYDDRLISLPHVS 1262    
Match NameStatsDescription
A0A2I0ACR9E-Value: 0.000e+0, PID: 81.95(Retrovirus-related Pol polyprotein from transposo... [more]
A0A445KL17E-Value: 0.000e+0, PID: 65.50(Retrovirus-related Pol polyprotein from transposo... [more]
A0A2N9ETU9E-Value: 0.000e+0, PID: 60.83(Uncharacterized protein {ECO:0000313|EMBL:SPC7825... [more]
A0A2N9IUF9E-Value: 0.000e+0, PID: 59.70(Uncharacterized protein {ECO:0000313|EMBL:SPD2902... [more]
A0A438JYT1E-Value: 0.000e+0, PID: 59.34(Retrovirus-related Pol polyprotein from transposo... [more]
A0A438HQV7E-Value: 0.000e+0, PID: 58.66(Retrovirus-related Pol polyprotein from transposo... [more]
A0A2N9GBC4E-Value: 0.000e+0, PID: 59.20Integrase catalytic domain-containing protein {ECO... [more]
A0A2N9IA16E-Value: 0.000e+0, PID: 58.89(Uncharacterized protein {ECO:0000313|EMBL:SPD2151... [more]
A0A438D4F0E-Value: 0.000e+0, PID: 58.26(Retrovirus-related Pol polyprotein from transposo... [more]
A0A396JXQ9E-Value: 0.000e+0, PID: 57.49(Putative RNA-directed DNA polymerase {ECO:0000313... [more]
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Analysis: 
NameDescription

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.

This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.
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