MSTSRLGSEENSGPESMIKEDLCMDIDPPFTENHATPEDWRRALAKVVPA
VVVLRTTACRAFDTEAAGASYATGFVVDKRNGIILTNRHVVKPGPVVAEA
MFVNREEVPVYPVYRDPVHDFGFFRYDPDAIQFLSYEDIPLAPEGACVGL
EIRVVGNDSGEKNYSAWSFQFEILVKGKELWGYVDGTESAPDSKEKEKLA
KWKVKDAQIMSWILGSMEPSMILNLRPYKSSKDMWGYLKKVYNQSNAARR
FQLELELGQLSQGSMTIQEFYSSFENLWNEYTDIVYESVSAEGLVAVQSV
HETSKRDQFLMKLRGDFEPVRSNLMNRNPVPSIDTCIGELFREEQRLMTQ
TFIDQKSQNSSPIPVAYVAQGKHRGGRDMSNIQCYSCKGFGHVATNCTKK
FCNYCKKAGHTIKDCPIRPPKKSETAYNVSVGSSNAPNFGQSSVTPEMIQ
QMIVNAFSTLGISGNKNSAHKPWYFDSAASNHMTSTTVPLNNVQKYKGDL
HIQTADGNSLPITAVGDISTSLNTVFVSPKLSTNLISVGQLVDNNCTVQF
SNSGCFVQDQVSGKMIAKGPKVGRLFPLLPSPSLVSNYVSCNAVDCNNQV
WHKRLGHPNSHVLSILLKSGLLGNKVSNSSNTDNIHCASCKLGKSKTLPF
PSRKSHTTKAFELVHTDVWGISPVVSHQHYKYFVTFIDDFSRYTWVYFLR
YKSEVFKAFQTFHALIETQFSAKIRILQSDSGGEYTSNEFQSFLQNHGII
SQRSCPSTPQQNGVAERKNRHLLDVVRTLLIESCVPSHFWCEALSTAVYL
INRLPSPTLNNESPYLRLYEDAPDYSDLHIFGCVCFVHLQPHERNKLTAQ
SVKCAFLGYGGTQNGFLCYDPNTRRIRVSRNVIFFENQSFFCTQMTSQLP
SIAILPHFPESSAPSQRFKPGHVYHRRTSPTMAPATLSDAPDPVLPSSND
PPPVRRSSRNSKPPDRLWNMSVGNKQWKQNFKLLQKIILGTLFPCLQMLS
QLVASGFIV
| Relationships |
|---|
| The polypeptide, XM_017385999.1, derives from mRNA, XM_017385999.1. |

Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
Match: A0A2I0ACR9 ((Retrovirus-related Pol polyprotein from transposon TNT 1-94 {ECO:0000313|EMBL:PKA53352.1}) (3.1.13.- {ECO:0000313|EMBL:PKA53352.1}))
HSP 1 Score: 1133.24 bits (2930), Expect = 0.000e+0
Identity = 535/675 (79.26%), Postives = 584/675 (86.52%), Query Frame = 0
Query: 300 VHETSKRDQFLMKLRGDFEPVRSNLMNRNPVPSIDTCIGELFREEQRLMTQTFIDQKSQNSSPIPVAYVAQGKHRGGRDMSNIQCYSCKGFGHVATNCTKKFCNYCKKAGHTIKDCPIRPPKKSETAYNVSVGSSNAPNFGQSSVTPEMIQQMIVNAFSTLGISGNKNSAHKPWYFDSAASNHMTSTTVPLNNVQKYKGDLHIQTADGNSLPITAVGDISTSLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGCFVQDQVSGKMIAKGPKVGRLFPLLPSPSLVSNYVSCNAVDCNNQVWHKRLGHPNSHVLSILLKSGLLGNKVSNSSNTDNIHCASCKLGKSKTLPFPSRKSHTTKAFELVHTDVWGISPVVSHQHYKYFVTFIDDFSRYTWVYFLRYKSEVFKAFQTFHALIETQFSAKIRILQSDSGGEYTSNEFQSFLQNHGIISQRSCPSTPQQNGVAERKNRHLLDVVRTLLIESCVPSHFWCEALSTAVYLINRLPSPTLNNESPYLRLYEDAPDYSDLHIFGCVCFVHLQPHERNKLTAQSVKCAFLGYGGTQNGFLCYDPNTRRIRVSRNVIFFENQSFFCTQMTSQLPSIAILPHFPESSAPSQRFKPGHVYHRRTSPTMAPAT--------LSDAPDPVLPSSNDPPPVRRSSRNSKPPDR 966
+HETSKRDQFLMKLRG+FE +RSNLMNR PVP +D C+GEL REEQRL+TQ ++QK+QNS+PIPVAY AQG+ +GGRDM+N+QCYSCK FGH+ATNCTKKFCNYCKK GH IKDC IRPPKK ETAYNVSVG SNAP+ QSS+TPEM+QQMIV+A S LG+SGNKNS KPWYFDS ASNHMT+T +PLNNVQKYKGDL I TADGNSLPITAVGDISTSLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGC VQDQVSGKMIAKGPKVGRLFPLL SPS +SNYV+CNAV C+NQVWH+RLGHPNSHVL +LLKSGLLGNK S SSN D CASCKLGKSKTLPFP K+ TTK FELVHTDVWGI+PV+SH+HYKYFVTFIDDF+R+TWVYFLR KSEVF F+ F AL+ETQFSAKI+ILQSDSGGEY SNEFQ FLQ+HGIISQRSCP TPQQNGVAERKNRHLLDVVRTLLIESCVPSHFWCEALSTAVYLINRLPS LNN+SPY L+ AP+YS+LHIFGCVCF HL HERNKLTAQSVKCAFLGY GTQ GFLCYDP+ RR RVSRNVIFFENQ FF TQ TS+ PS++ LPHFPES P QRF PG+VY RRT P T L A DP+LP SNDPPP+RRSSR KPP+R
Sbjct: 1 MHETSKRDQFLMKLRGEFEAIRSNLMNREPVPLLDICVGELLREEQRLITQAVLEQKAQNSAPIPVAYAAQGRSKGGRDMTNVQCYSCKEFGHIATNCTKKFCNYCKKTGHIIKDCSIRPPKKPETAYNVSVGPSNAPSPSQSSITPEMVQQMIVSALSALGLSGNKNSNPKPWYFDSGASNHMTNTALPLNNVQKYKGDLQIHTADGNSLPITAVGDISTSLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGCLVQDQVSGKMIAKGPKVGRLFPLLLSPSSMSNYVACNAVQCDNQVWHRRLGHPNSHVLRVLLKSGLLGNKNSTSSNNDVADCASCKLGKSKTLPFPLHKTRTTKPFELVHTDVWGIAPVISHEHYKYFVTFIDDFTRFTWVYFLRSKSEVFSVFKVFLALVETQFSAKIKILQSDSGGEYMSNEFQFFLQSHGIISQRSCPFTPQQNGVAERKNRHLLDVVRTLLIESCVPSHFWCEALSTAVYLINRLPSANLNNDSPYFCLFGHAPNYSNLHIFGCVCFAHLPAHERNKLTAQSVKCAFLGYAGTQKGFLCYDPHARRTRVSRNVIFFENQPFFSTQQTSEFPSLSALPHFPESPTPVQRFTPGYVYRRRTPPASDALTSLTEVLPHLPTASDPILPISNDPPPLRRSSRPHKPPER 675
Match: A0A445KL17 ((Retrovirus-related Pol polyprotein from transposon TNT 1-94 {ECO:0000313|EMBL:RZC11542.1}) (2.7.7.7 {ECO:0000313|EMBL:RZC11542.1}))
HSP 1 Score: 1015.76 bits (2625), Expect = 0.000e+0
Identity = 505/817 (61.81%), Postives = 610/817 (74.66%), Query Frame = 0
Query: 162 KNYSAWSFQFEILVKGKELWGYVDGTESAPDSK-EKEKLAKWKVKDAQIMSWILGSMEPSMILNLRPYKSSKDMWGYLKKVYNQSNAARRFQLELELGQLSQGSMTIQEFYSSFENLWNEYTDIVYESVSAEGLVAVQSVHETSKRDQFLMKLRGDFEPVRSNLMNRNPVPSIDTCIGELFREEQRLMTQTFIDQKSQNSSPIPVAYVAQGKHRGGRDMSNIQCYSCKGFGHVATNCTKKFCNYCKKAGHTIKDCPIRPPKKSETAYNVSVGSS---NAPNFGQSSVTPEMIQQMIVNAFSTLGISGNKNSAHKPWYFDSAASNHMTSTTVPLNNVQKYKGDLHIQTADGNSLPITAVGDISTSLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGCFVQDQVSGKMIAKGPKVGRLFPL--LPSPSLVSNYVSCNAVDCNNQVWHKRLGHPNSHVLSILLKSGLLGNKVSNSSNTDNIHCASCKLGKSKTLPFPSRKSHTTKAFELVHTDVWGISPVVSHQHYKYFVTFIDDFSRYTWVYFLRYKSEVFKAFQTFHALIETQFSAKIRILQSDSGGEYTSNEFQSFLQNHGIISQRSCPSTPQQNGVAERKNRHLLDVVRTLLIESCVPSHFWCEALSTAVYLINRLPSPTLNNESPYLRLYEDAPDYSDLHIFGCVCFVHLQPHERNKLTAQSVKCAFLGYGGTQNGFLCYDPNTRRIRVSRNVIFFENQSFFCTQMTSQLPSIAILPHFPESSAPSQRFKPGHVYHRRTSPTMAPATLSDAP--DPVLPSS----NDPPPVRRSSRNSKPPDR 966
KNYSAW+FQF+I + GK+LWG+VDG+ PD K + AKW VKDAQ+M+WILGS++P+++LNLRPYK++ MW YLKKVY+Q+N ARRFQLE ++ Q S++I +FYS F NLW EYTDIVY + +EGL +VQ+VHET+KRDQFLMKLR DFE +RSNLM+RNPVPS+D C L REEQRL+TQ+ I + +PVAYVA+GK + DM IQC+ CK FGH A+NC KFCNYCKK GH IK+CPIRPPK++ TA+ SV SS AP+ ++TPEM+QQMI++AFS LG SG +S PWYFDS ASNHMT+ L N++KY GDL I TADGN LPITA GDIS SL VFVSP L++NLISVGQLVDN+C VQFS SGC VQDQ SGK+IAKGPKVGRLFP+ SL VSCN+ + QVWHKRLGHPN++VL LLKS LGNK ++S N + C CKLGKSK LPFP+ +S+ T+ FE++H+DVWG++PV+SH HYKYF+TFIDD+SR+TWVYFLR K EVF F+ FHA ++TQFS+KI+I +SD+ GEY S+ FQ FLQ++GI+ QRSCPSTPQQNGVAERKNRHLLDVVRTLL+ES VPS F CEALSTAV+LINRL SP++ NESP+ RLY P+YS+L IFGCVC+VHL P ER KLTAQSV+CAFLGY Q GFLCYDP RRIRVSRNVIF EN FF + P I++LP F S A KP Y+RRT+ T P D L + +P P RRSSR KPPDR
Sbjct: 899 KNYSAWAFQFQIFLTGKDLWGHVDGSSPIPDKDTAKVEHAKWTVKDAQVMAWILGSVDPNIVLNLRPYKTAATMWNYLKKVYSQNNEARRFQLEHDIATFKQDSLSISDFYSQFMNLWAEYTDIVYADLPSEGLNSVQTVHETTKRDQFLMKLRSDFEGIRSNLMHRNPVPSLDACFNALLREEQRLLTQSIIG--DHKYAIVPVAYVARGKPKS-HDMRTIQCFYCKQFGHYASNCPNKFCNYCKKDGHIIKECPIRPPKRNVTAFTASVDSSVQQQAPD-PAPTMTPEMVQQMIISAFSALGFSGKSSS---PWYFDSGASNHMTNNAQFLTNIKKYLGDLKIHTADGNPLPITATGDISPSLTNVFVSPGLTSNLISVGQLVDNDCQVQFSQSGCLVQDQHSGKIIAKGPKVGRLFPIQFSLPSSLSLPLVSCNSAIVDYQVWHKRLGHPNANVLHDLLKSNYLGNKHNSSLNAVHFDCIPCKLGKSKILPFPTHQSNVTQPFEIIHSDVWGVAPVISHAHYKYFITFIDDYSRFTWVYFLRSKDEVFSTFKFFHAFVQTQFSSKIKIFRSDNEGEYMSHSFQDFLQSNGIVFQRSCPSTPQQNGVAERKNRHLLDVVRTLLLESHVPSRFLCEALSTAVHLINRLSSPSIGNESPFNRLYGHPPNYSNLRIFGCVCYVHLPPRERTKLTAQSVECAFLGYSPHQKGFLCYDPTIRRIRVSRNVIFQENVYFFASHPDLTSPPISVLPLFSNSHAGEPSPKPLLTYNRRTTANQNQQTEPQGPLRDNSLAADPVEEPEPAPPRRSSRIIKPPDR 1708
Match: A0A2N9ETU9 ((Uncharacterized protein {ECO:0000313|EMBL:SPC78252.1}))
HSP 1 Score: 950.273 bits (2455), Expect = 0.000e+0
Identity = 473/823 (57.47%), Postives = 595/823 (72.30%), Query Frame = 0
Query: 162 KNYSAWSFQFEILVKGKELWGYVDGTESAPDSKEKEKLAKWKVKDAQIMSWILGSMEPSMILNLRPYKSSKDMWGYLKKVYNQSNAARRFQLELELGQLSQGSMTIQEFYSSFENLWNEYTDIVYESVSAEGLVAVQSVHETSKRDQFLMKLRGDFEPVRSNLMNRNPVPSIDTCIGELFREEQRLMTQTFIDQKSQNSSPIPVAYVAQGKHRGGRDMSNIQCYSCKGFGHVATNCTKKFCNYCKKAGHTIKDCPIRPPKKSETAYNVSVGSSNAPNFGQ-----------SSVTPEMIQQMIVNAFSTLGISGNKNSAHKPWYFDSAASNHMTSTTVPLNNVQKYKGDLHIQTADGNSLPITAVGDISTSLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGCFVQDQVSGKMIAKGPKVGRLFPL-LPSPSLVSNYVS--CNAVDCNNQVWHKRLGHPNSHVLSILLKSGLLGNKVSNSSNTDNIHCASCKLGKSKTLPFPSRKSHTTKAFELVHTDVWGISPVVSHQHYKYFVTFIDDFSRYTWVYFLRYKSEVFKAFQTFHALIETQFSAKIRILQSDSGGEYTSNEFQSFLQNHGIISQRSCPSTPQQNGVAERKNRHLLDVVRTLLIESCVPSHFWCEALSTAVYLINRLPSPTLNNESPYLRLYEDAPDYSDLHIFGCVCFVHLQPHERNKLTAQSVKCAFLGYGGTQNGFLCYDPNTRRIRVSRNVIFFENQSFFCTQMTSQLPSIAILPHFPESSAPS----QRFKPGHVYHRRTSPTMAPATLSDAPDPVLPSSNDPPPVRRSSRNSKPPDR 966
KNY+AW FQ E +KGK LWG++DG+ S+ + K QIMSWILGSMEP +IL+LRP++S+K MW YLK+VY+Q N AR+F LEL + QG +++Q++YS F LWN+Y+D+V VSAEGL ++Q V TS+RDQFLMKLR +FE +R++L+NR+PVP+++ C GEL REEQRL TQ ++Q S+ + VAY A GK +G RDMS QCYSCK +GH+A NC +KFCNYCK+ GH IK+C IRP +S AY+ V + P S+T EM+Q+MIV+AFS LG G +S W DS ASNHMT++ L+NV++Y G HIQTA+G++LPI AVGD+S+ L V VSP LS NL+SVGQLVD + V F++ GC VQDQ+SG++IAKGPK GRLF L +P+P + ++S CN + +VWHKRLGHPNS +LS LLKSGLL NK SS + CA+CKLGKSK LPFPS S T +FE++H+DVWGISP +SH YKYFVTFIDD+S+YTWVYFLR+KSEVF F+ F AL++TQFSA ++IL+SDSGGEY S+EFQSFL + GIISQRSCP TPQQNGVAERKNRHLLDVVRTLLIES VP FW EAL+TA +LINRLPS LN ESPY RLY P Y++LH FGCVCF+HL P +RNKL+AQS++CAFLGY TQ G++CYDP + R+RVSRNV+FFENQ FF +S+ P +A LP F ++ +RF+PG VY RR SP + P+ P+LP P P+RRSSR S PPDR
Sbjct: 14 KNYTAWEFQLETFLKGKALWGHIDGSSKGGSSEADKAAWAAKDN--QIMSWILGSMEPHLILSLRPHRSAKAMWDYLKQVYHQDNNARQFHLELAIANYIQGDLSVQDYYSGFLTLWNDYSDLVTAKVSAEGLASIQHVQRTSQRDQFLMKLRPEFESIRASLVNRDPVPTLEACFGELLREEQRLNTQNLMEQSRIASNTVSVAYAAHGKGKG-RDMSTTQCYSCKKYGHIAPNCPQKFCNYCKQPGHIIKECTIRP-SRSTKAYHAVVTDDSQPAANAVSSAVVLQPPAPSLTREMVQEMIVSAFSALGFQGTGSSP--SWILDSGASNHMTNSLHGLSNVREYCGSSHIQTANGSALPIVAVGDVSSFLKDVLVSPNLSVNLVSVGQLVDQDYGVNFTHDGCVVQDQMSGQVIAKGPKHGRLFSLQIPAPRNLPPFLSLLCNKSRVSPEVWHKRLGHPNSRILSYLLKSGLLNNKEHFSSAVFS-DCATCKLGKSKILPFPSEGSRATHSFEIIHSDVWGISPTISHAQYKYFVTFIDDYSKYTWVYFLRHKSEVFPMFKLFLALVQTQFSATVKILRSDSGGEYMSHEFQSFLHSKGIISQRSCPYTPQQNGVAERKNRHLLDVVRTLLIESSVPPKFWVEALTTATFLINRLPSQALNLESPYFRLYHHHPTYTNLHTFGCVCFMHLPPPDRNKLSAQSIRCAFLGYSVTQKGYVCYDPTSNRVRVSRNVLFFENQWFFPMSSSSESP-VAFLPSFDDTLHDPRPLIERFQPGMVYQRR-SPVLPPSA------PILP----PVPLRRSSRVSAPPDR 817
Match: A0A2N9GSB4 ((Uncharacterized protein {ECO:0000313|EMBL:SPD02373.1}))
HSP 1 Score: 946.806 bits (2446), Expect = 0.000e+0
Identity = 473/823 (57.47%), Postives = 594/823 (72.17%), Query Frame = 0
Query: 162 KNYSAWSFQFEILVKGKELWGYVDGTESAPDSKEKEKLAKWKVKDAQIMSWILGSMEPSMILNLRPYKSSKDMWGYLKKVYNQSNAARRFQLELELGQLSQGSMTIQEFYSSFENLWNEYTDIVYESVSAEGLVAVQSVHETSKRDQFLMKLRGDFEPVRSNLMNRNPVPSIDTCIGELFREEQRLMTQTFIDQKSQNSSPIPVAYVAQGKHRGGRDMSNIQCYSCKGFGHVATNCTKKFCNYCKKAGHTIKDCPIRPPKKSETAYNVSVGSSNAPNFGQ-----------SSVTPEMIQQMIVNAFSTLGISGNKNSAHKPWYFDSAASNHMTSTTVPLNNVQKYKGDLHIQTADGNSLPITAVGDISTSLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGCFVQDQVSGKMIAKGPKVGRLFPL-LPSPSLVSNYVS--CNAVDCNNQVWHKRLGHPNSHVLSILLKSGLLGNKVSNSSNTDNIHCASCKLGKSKTLPFPSRKSHTTKAFELVHTDVWGISPVVSHQHYKYFVTFIDDFSRYTWVYFLRYKSEVFKAFQTFHALIETQFSAKIRILQSDSGGEYTSNEFQSFLQNHGIISQRSCPSTPQQNGVAERKNRHLLDVVRTLLIESCVPSHFWCEALSTAVYLINRLPSPTLNNESPYLRLYEDAPDYSDLHIFGCVCFVHLQPHERNKLTAQSVKCAFLGYGGTQNGFLCYDPNTRRIRVSRNVIFFENQSFFCTQMTSQLPSIAILPHFPESSAPS----QRFKPGHVYHRRTSPTMAPATLSDAPDPVLPSSNDPPPVRRSSRNSKPPDR 966
KNY+AW FQ E +KGK LWG++DG+ S+ + K QIMSWILGSMEP +IL+LRP++S+K MW YLK+VY+Q N ARRF LEL + QG +++Q++YS F LWN+Y+D+V VSAEGL ++Q VH TS+RDQFLMKLR +FE +R++L+NR+PVP+++ C GEL REEQRL TQ ++Q S+ + VAY A GK +G RDMS QCYSCK +GH+A NC +KFCNYCK+ GH IK+C IRP +S AY+ V + P S+T EM+Q+MIV+AFS LG G +S W DS ASNHMT++ L+NV++Y G HIQTA+G++LPI AVGD+S L V VSP LS NL+SVGQLVD + V F++ GC VQDQ+SG++IAKGPK GRLF L +P+P + ++S CN + +VWHKRLGHPNS +LS LLKSGLL NK SS + CA+CKLGKSK LPFPS S T +FE++H+DVWGIS +SH YKYFVTFIDD+S+YTWVYFLR+KSEVF F+ F AL++TQFSA ++IL+SDSGGEY S+EFQSFL + GIISQRSCP TPQQNGVAERKNRHLLDVV+TLLIES VP FW EAL+TA +LINRLPS LN ESPY RLY P Y++LH FGCVCF+HL P +RNKL+AQS++CAFLGY TQ G++CYDP + R+RVSRNV+FFENQ FF +S+ P +A LP F ++ +RF+PG VY RR SP + P+ P+LP P P+RRSSR S PPDR
Sbjct: 14 KNYTAWEFQLETFLKGKALWGHIDGSSKGGSSEADKAAWAAKDN--QIMSWILGSMEPHLILSLRPHRSAKAMWDYLKQVYHQDNNARRFHLELAIANYIQGDLSVQDYYSGFLTLWNDYSDLVTAKVSAEGLASIQHVHRTSQRDQFLMKLRPEFESIRASLVNRDPVPTLEACFGELLREEQRLNTQNLMEQSRIASNTVSVAYAAHGKGKG-RDMSTTQCYSCKKYGHIAPNCPQKFCNYCKQPGHIIKECTIRP-SRSTKAYHAVVTDDSQPAANAVSSAVVLQPPTPSLTREMVQEMIVSAFSALGFQGTGSSP--SWILDSGASNHMTNSLHGLSNVREYCGSSHIQTANGSALPIVAVGDVSFFLKDVLVSPNLSVNLVSVGQLVDQDYGVNFTHDGCVVQDQMSGQVIAKGPKHGRLFSLQIPAPRNLPPFLSLLCNKSRVSPEVWHKRLGHPNSRILSYLLKSGLLNNKEHFSSAVFS-DCATCKLGKSKILPFPSEGSRATHSFEIIHSDVWGISLTISHAQYKYFVTFIDDYSKYTWVYFLRHKSEVFPMFKLFLALVQTQFSATVKILRSDSGGEYMSHEFQSFLHSKGIISQRSCPYTPQQNGVAERKNRHLLDVVQTLLIESSVPPKFWVEALTTATFLINRLPSQALNLESPYFRLYHHHPTYTNLHTFGCVCFMHLPPPDRNKLSAQSIRCAFLGYSVTQKGYVCYDPTSNRVRVSRNVLFFENQWFFPMSSSSESP-VAFLPSFDDTLHDPRPLIERFQPGMVYQRR-SPVLPPSA------PILP----PVPLRRSSRVSAPPDR 817
Match: A0A2K3NBK9 ((Retrovirus-related Pol polyprotein from transposon TNT 1-94 {ECO:0000313|EMBL:PNY00431.1}) (Fragment))
HSP 1 Score: 905.59 bits (2339), Expect = 0.000e+0
Identity = 443/815 (54.36%), Postives = 576/815 (70.67%), Query Frame = 0
Query: 152 IRVVGNDSGEKNYSAWSFQFEILVKGKELWGYVDGTESAPDSKEKEKLAKWKVKDAQIMSWILGSMEPSMILNLRPYKSSKDMWGYLKKVYNQSNAARRFQLELELGQLSQGSMTIQEFYSSFENLWNEYTDIVYESVSAEGLVAVQSVHETSKRDQFLMKLRGDFEPVRSNLMNRNPVPSIDTCIGELFREEQRLMTQTFIDQKSQNSSPIPVAYVAQGKHRGGRDMSNIQCYSCKGFGHVATNCTKKFCNYCKKAGHTIKDCPIRPPKKSETAYNVSVGSSNAPNFGQSSVTPEMIQQMIVNAFSTLGISGNKNSAHKPWYFDSAASNHMTSTTVPLNNVQKYKGDLHIQTADGNSLPITAVGDISTSLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGCFVQDQVSGKMIAKGPKVGRLFPLLPSPSLVSNYVSCNAVDCNNQVWHKRLGHPNSHVLSILLKSGLLGNKVSNSSNTDNIHCASCKLGKSKTLPFPSRKSHTTKAFELVHTDVWGISPVVSHQHYKYFVTFIDDFSRYTWVYFLRYKSEVFKAFQTFHALIETQFSAKIRILQSDSGGEYTSNEFQSFLQNHGIISQRSCPSTPQQNGVAERKNRHLLDVVRTLLIESCVPSHFWCEALSTAVYLINRLPSPTLNNESPYLRLYEDAPDYSDLHIFGCVCFVHLQPHERNKLTAQSVKCAFLGYGGTQNGFLCYDPNTRRIRVSRNVIFFENQSFFCTQMTSQLPSIAILPHFPESSAPSQRFKPGHVYHRRTSPTMAPATLSDAPDPVLPSSNDPPPVRRSSRNSKPPDR 966
IR G KNY AWSFQFE+ VKG+ L G+++GT +AP + L KW+ +DAQ+++WIL S+EP MI NLR + ++K+MW +LK +Y +N A+RFQLE+++ QG M+IQ++YS F N+W E+++I++ V L +Q ++E SKRDQFLMKLR +FE R+ L+NR+PVP+++ C+GEL REEQRL+TQ + + VAY AQG GRDM +QC+SCK FGH A +C+KKFCNYCK+ GH I +CP RP ++ A++ ++N + ++TPE +QQ++++A STLGI+G PW+ DS ASNHMT ++ L NV YKG+ +IQ ADGN+LPI A+GDI+ S N+VFVSP L++NLISVGQLVDNNC V FS +GCFVQDQVSGK+IAKGPKVGRLFPL S S +CN V H +LGHPN VLS L+KSGLLGNK N ++ + +C+ CKL KSKTLPFP K FE++H+DVWG+SPV+SH YKYFVTFIDDFSR+TWVYFL K+EVF+ F+ F A ++ QF I+IL++DSGGEY S+ FQ +LQ GI+SQRSCP TPQQNG+AERKNRHLLDV R+LL+ + VP FW EAL+TAV+LINRLPS L +SPY RL+ PDY++LH FGCVCFVHL P ERNKL AQSV CAFLGY T GFLCYD ++R+R+SRNV+FF+ Q++F S S+ ++ F S+ +RFKPGHVY RRT PT++ + P P+RRS R S PPDR
Sbjct: 12 IRFTG-----KNYPAWSFQFEMFVKGESLSGHLNGTSTAP--TDVAALDKWEKQDAQVITWILASVEPQMINNLRSFSTAKEMWDHLKTIYKLNNDAKRFQLEVDIAHYRQGPMSIQDYYSGFLNMWAEHSEILHADVPKTSLATLQKIYEVSKRDQFLMKLRPEFEVARAALLNRSPVPNLEVCVGELLREEQRLLTQNSMLHDQSTPDALTVAYSAQGT-ANGRDMRPVQCFSCKQFGHFARDCSKKFCNYCKQRGHIITECPTRPARRRTQAFH---ATTNNADTTSDALTPEKVQQIVLSALSTLGINGKSTGTSTPWFVDSGASNHMTGSSDHLQNVCAYKGNQNIQIADGNTLPIYAIGDINPSFNSVFVSPGLASNLISVGQLVDNNCNVNFSRTGCFVQDQVSGKVIAKGPKVGRLFPLQFHSSSFS--FACNDVPHPFMDLHNKLGHPNFVVLSHLIKSGLLGNK--NITHNSSFNCSVCKLAKSKTLPFPDHAHRAEKCFEIIHSDVWGVSPVLSHGKYKYFVTFIDDFSRFTWVYFLHSKAEVFEMFKKFLAYVDNQFHTTIKILRTDSGGEYISHNFQEYLQQKGILSQRSCPYTPQQNGIAERKNRHLLDVTRSLLLAASVPPQFWVEALTTAVFLINRLPSQVLGFDSPYFRLFLAHPDYTNLHPFGCVCFVHLPPPERNKLGAQSVMCAFLGYSTTHKGFLCYDHTSQRLRMSRNVVFFDQQNYFPCSKPSSTDSVTLVD-FSNDSSSVERFKPGHVYVRRT-PTLSLSVADPP------PEPAPAPLRRSERVSHPPDR 803
Match: A0A2N9IUF9 ((Uncharacterized protein {ECO:0000313|EMBL:SPD29027.1}))
HSP 1 Score: 904.434 bits (2336), Expect = 0.000e+0
Identity = 458/823 (55.65%), Postives = 574/823 (69.74%), Query Frame = 0
Query: 162 KNYSAWSFQFEILVKGKELWGYVDGTESAPDSKEKEKLAKWKVKDAQIMSWILGSMEPSMILNLRPYKSSKDMWGYLKKVYNQSNAARRFQLELELGQLSQGSMTIQEFYSSFENLWNEYTDIVYESVSAEGLVAVQSVHETSKRDQFLMKLRGDFEPVRSNLMNRNPVPSIDTCIGELFREEQRLMTQTFIDQKSQNSSPIPVAYVAQGKHRGGRDMSNIQCYSCKGFGHVATNCTKKFCNYCKKAGHTIKDCPIRPPKKSETAYNVSVGSSNAPNFG-----------QSSVTPEMIQQMIVNAFSTLGISGNKNSAHKPWYFDSAASNHMTSTTVPLNNVQKYKGDLHIQTADGNSLPITAVGDISTSLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGCFVQDQVSGKMIAKGPKVGRLFPL-LPSPSLVSNYVS--CNAVDCNNQVWHKRLGHPNSHVLSILLKSGLLGNKVSNSSNTDNIHCASCKLGKSKTLPFPSRKSHTTKAFELVHTDVWGISPVVSHQHYKYFVTFIDDFSRYTWVYFLRYKSEVFKAFQTFHALIETQFSAKIRILQSDSGGEYTSNEFQSFLQNHGIISQRSCPSTPQQNGVAERKNRHLLDVVRTLLIESCVPSHFWCEALSTAVYLINRLPSPTLNNESPYLRLYEDAPDYSDLHIFGCVCFVHLQPHERNKLTAQSVKCAFLGYGGTQNGFLCYDPNTRRIRVSRNVIFFENQSFFCTQMTSQLPSIAILPHFPESSAPS----QRFKPGHVYHRRTSPTMAPATLSDAPDPVLPSSNDPPPVRRSSRNSKPPDR 966
KNY+AW FQ E +KGK LWG++DG+ S+ + K QIMSWILGSMEP +IL+LRP++S+K MW YLK+VY+Q N ARRF LEL + QG +++Q++YS F LWN+Y+D+V VSAEGL +VQ VH TS+RDQFLMKLR +FE +R++L+NR+PVP+++ C GEL REEQRL TQ ++Q S+ + VAY A GK + GRDMS QCYSCK +GH+A NC +KFCNYCK+ GH IK+C IR P +S AY+ V + P S+T EM+Q+MIV+AFS LG G +S W DS ASNHMT++ L+NV++Y G HIQTA+ +SVGQLVD + V F++ GC VQDQ+SG++IAKGPK GRLF L +P+P + ++S CN + +VWHKRLGHPNS +LS LLKSGLL NK SS + CA+CKLGKSK LPFPS S T +FE++H+DVWGISP +SH YKYFVTFIDD+S+YTWVYFLR+KSEVF F+ F AL++TQFSA ++IL+SDSGGEY S+EFQSFL + GIISQRSCP TPQQNGVAERKNRHLLDVVRTLLIES VP FW EAL+TA +LINRLPS LN ESPY RLY P Y++LH FGCVCF+HL P +RNKL+AQS++CAFLGY TQ G++CYDP + R+RVSRNV+FFENQ FF +S+ P +A LP F ++ +RF+PG VY RR SP + P+ P+LP P P+RRSSR S PPDR
Sbjct: 14 KNYTAWEFQLETFLKGKALWGHIDGSSKGGSSEADKAAWAAKDN--QIMSWILGSMEPHLILSLRPHRSAKAMWDYLKQVYHQDNNARRFHLELAIANYIQGDLSVQDYYSGFLTLWNDYSDLVTAKVSAEGLASVQHVHRTSQRDQFLMKLRPEFESIRASLVNRDPVPTLEACFGELLREEQRLNTQNLMEQSRIASNTVSVAYAAHGKGK-GRDMSTTQCYSCKKYGHIAPNCPQKFCNYCKQPGHIIKECTIR-PSRSTKAYHAVVTDDSQPAANAVSSAVVLQPPAPSLTREMVQEMIVSAFSALGFQGTGSSP--SWILDSGASNHMTNSLHGLSNVREYCGSSHIQTAN-----------------------------VSVGQLVDQDYGVNFTHDGCVVQDQMSGQVIAKGPKHGRLFSLQIPAPRNLPPFLSLLCNKSRVSPEVWHKRLGHPNSRILSYLLKSGLLNNKEHFSSAVFS-DCATCKLGKSKILPFPSEGSRATHSFEIIHSDVWGISPTISHAQYKYFVTFIDDYSKYTWVYFLRHKSEVFPMFKLFLALVQTQFSATVKILRSDSGGEYMSHEFQSFLHSKGIISQRSCPYTPQQNGVAERKNRHLLDVVRTLLIESSVPPKFWVEALTTATFLINRLPSQALNLESPYFRLYHHHPTYTNLHTFGCVCFMHLPPPDRNKLSAQSIRCAFLGYSVTQKGYVCYDPTSNRVRVSRNVLFFENQWFFPMSSSSESP-VAFLPSFDDTLHDPRPLIERFQPGMVYQRR-SPVLPPSA------PILP----PVPLRRSSRVSAPPDR 788
Match: A0A438JYT1 ((Retrovirus-related Pol polyprotein from transposon TNT 1-94 {ECO:0000313|EMBL:RVX14120.1}))
HSP 1 Score: 886.715 bits (2290), Expect = 0.000e+0
Identity = 442/801 (55.18%), Postives = 556/801 (69.41%), Query Frame = 0
Query: 163 NYSAWSFQFEILVKGKELWGYVDGTE-SAPDSKEKEKLA----KWKVKDAQIMSWILGSMEPSMILNLRPYKSSKDMWGYLKKVYNQSNAARRFQLELELGQLSQGSMTIQEFYSSFENLWNEYTDIVYESVSAEGLVAVQSVHETSKRDQFLMKLRGDFEPVRSNLMNRNPVPSIDTCIGELFREEQRLMTQTFIDQKSQNSSPIPVAYVAQGKHRGGRDM--SNIQCYSCKGFGHVATNCTKKFCNYCKKAGHTIKDCPIRPPKKSETAYNVSV-----GSSNAPNFGQSS--------VTPEMIQQMIVNAFSTLGISGNKNSAHKPWYFDSAASNHMTSTTVPLNNVQKYKGDLHIQTADGNSLPITAVGDISTSLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGCFVQDQVSGKMIAKGPKVGRLFPL-LPSPSLVSNYVSCNAVDCNN-----QVWHKRLGHPNSHVLSILLKSGLLGNKVSNSSNTDNIHCASCKLGKSKTLPFPSRKSHTTKAFELVHTDVWGISPVVSHQHYKYFVTFIDDFSRYTWVYFLRYKSEVFKAFQTFHALIETQFSAKIRILQSDSGGEYTSNEFQSFLQNHGIISQRSCPSTPQQNGVAERKNRHLLDVVRTLLIESCVPSHFWCEALSTAVYLINRLPSPTLNNESPYLRLYEDAPDYSDLHIFGCVCFVHLQPHERNKLTAQSVKCAFLGYGGTQNGFLCYDPNTRRIRVSRNVIFFENQSFF-------CTQMTSQLPSIAILPHFPESSAPSQRFKPGHVYHRRTSP 930
NYS W+FQFE+ +KGK+LWG++DGT+ P + +K + W V DA+IMSW+LG +EP ++ +LRP++ ++ MW YLKKVY+Q N ARRFQLE + GS++IQ++YS+F LW+EY D+V V L +Q++H T++RDQFLMKLR ++E VRS+L+NR+PVPS+D C GEL REEQRL TQ ++Q +S VAY AQG+ G M N+QC+ CK +GH+A C KKFC+YCKK GH IK+C IRP + A+ SV + ++P+ S TPEM+Q+++++A ST+G GN ++ K WY DS ASNHMT+ L +V+ Y G IQTA+G+SLPI A+GD S+ VF++P+LSTNLISVGQLVDNNC V FS +GC VQDQV+GK IAKGPKVGRLFPL LP P S S + CNN VWH+RLGHPN+ +LS +L S L GNK S + + C SCKLGKSKTLPFP S + F+L+H+DVWG+SPV SH+ +KY+VTFIDD SR+TWVYFLR KSEVF+ F F A ++ QFS I+ L++DSGGEY S EFQ+FL + GII QRSCPSTPQQNGVAERKNRHLLDVVR LL+ES VPS FW EAL TA +LINRLPS L+ ESPY RL+ P Y L IFGCVCFVHL PHER+KL+AQSV+CAFLGY Q GF+CYDP R R+SRNVIFFENQ FF + T LPS F + S RF+PG VY RR+ P
Sbjct: 14 NYSTWAFQFELFLKGKDLWGHIDGTDVEKPSTFDKSQDVGTSHSWAVLDARIMSWLLGLVEPHIVTHLRPHRFAQSMWAYLKKVYHQDNDARRFQLEHAIAMFQHGSLSIQDYYSAFLTLWHEYADLVTADVPITALSTIQTIHATTRRDQFLMKLRPEYESVRSSLLNRSPVPSLDICFGELLREEQRLSTQAILEQSHGSSGTTTVAYAAQGR---GPPMHSKNLQCFCCKEYGHIAAICPKKFCSYCKKKGHIIKECRIRPQNRQAQAFQTSVIVPPVATHDSPSAACSVPAPPAPDYCTPEMVQRILISALSTMGFQGNNST--KLWYVDSGASNHMTNNPTALCHVRPYAGQSSIQTANGSSLPIAAIGDASSKFTDVFLAPQLSTNLISVGQLVDNNCAVNFSGNGCVVQDQVTGKPIAKGPKVGRLFPLFLPVPDF-SPRSSIKSFACNNVSDLSMVWHRRLGHPNTQILSHVLNSDLPGNKDRYSLS---LECDSCKLGKSKTLPFPLHASRASHCFDLIHSDVWGLSPVSSHEKFKYYVTFIDDHSRFTWVYFLRSKSEVFRTFTEFLAYVDNQFSTSIKTLRTDSGGEYLSTEFQAFLASKGIIHQRSCPSTPQQNGVAERKNRHLLDVVRILLLESSVPSMFWVEALKTATHLINRLPSQVLHMESPYFRLFAKQPSYDHLRIFGCVCFVHLPPHERHKLSAQSVRCAFLGYNMCQKGFVCYDPTLHRTRISRNVIFFENQHFFPVSSSTVSSSSTVVLPSFE--QQFSDLHPVSSRFQPGIVYTRRSRP 803
Match: A5BNN7 ((Uncharacterized protein {ECO:0000313|EMBL:CAN74794.1}))
HSP 1 Score: 883.634 bits (2282), Expect = 0.000e+0
Identity = 443/800 (55.38%), Postives = 554/800 (69.25%), Query Frame = 0
Query: 163 NYSAWSFQFEILVKGKELWGYVDGTE-SAPDSKEKEKLA----KWKVKDAQIMSWILGSMEPSMILNLRPYKSSKDMWGYLKKVYNQSNAARRFQLELELGQLSQGSMTIQEFYSSFENLWNEYTDIVYESVSAEGLVAVQSVHETSKRDQFLMKLRGDFEPVRSNLMNRNPVPSIDTCIGELFREEQRLMTQTFIDQKSQNSSPIPVAYVAQGKHRGGRDM--SNIQCYSCKGFGHVATNCTKKFCNYCKKAGHTIKDCPIRPPKKSETAYNVSV-----GSSNAPNFGQSS--------VTPEMIQQMIVNAFSTLGISGNKNSAHKPWYFDSAASNHMTSTTVPLNNVQKYKGDLHIQTADGNSLPITAVGDISTSLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGCFVQDQVSGKMIAKGPKVGRLFPL-LP----SPSLVSNYVSCNAVDCNNQVWHKRLGHPNSHVLSILLKSGLLGNKVSNSSNTDNIHCASCKLGKSKTLPFPSRKSHTTKAFELVHTDVWGISPVVSHQHYKYFVTFIDDFSRYTWVYFLRYKSEVFKAFQTFHALIETQFSAKIRILQSDSGGEYTSNEFQSFLQNHGIISQRSCPSTPQQNGVAERKNRHLLDVVRTLLIESCVPSHFWCEALSTAVYLINRLPSPTLNNESPYLRLYEDAPDYSDLHIFGCVCFVHLQPHERNKLTAQSVKCAFLGYGGTQNGFLCYDPNTRRIRVSRNVIFFENQSFF-------CTQMTSQLPSIAILPHFPESSAPSQRFKPGHVYHRRTSP 930
NYS W+FQFE+ +KGK+LWG++DGT+ P + EK + W V DA+IMSW+LGS+EP ++ +LRP++S++ MW YLKKVY+Q N ARRFQLE + GS++IQ++YS+F LW+EY D+V V L +Q +H T++RDQFLMKLR ++E VRS+L+NR+PVPS+D C GEL REEQRL TQ ++Q +S VAY AQG+ G M N+QC+ CK +GH+A C KKFC+YCKK GH IK+C IRP + A+ SV + ++P+ S TPEM+Q+++++A S +G GN ++ K WY DS ASNHMT+ L +V+ Y G IQTA+G+SLPI A+GD S+ VF++P+LSTNLISVGQLVDNNC V FS +GC VQDQV+GK IAKGPKVGRLFPL LP SP +CN V + VWH+RLGHPN+ +LS +L S L GNK S + + C SCKLGKSKTLPFP S + F+L+H+DVWG SPV SH+ +KY+VTFIDD SR+TWVYFLR KSEVF F F A ++ QFS I+ L++DSGGEY S EFQ+FL + GII QRSCPSTPQQNGVAERKNRHLLDVVRTLL+ES VPS FW EAL TA +LINRLPS L+ ESPY RL+ P Y L IFGCVCFVHL PHER+KL+AQSV+CAFLGY Q GF+CYDP R R+SRNVIFFENQ FF + T LPS F + S F+PG VY RR+ P
Sbjct: 14 NYSTWAFQFELFLKGKDLWGHIDGTDVEKPSTFEKSQDVGFSPSWAVLDARIMSWLLGSVEPHIVTHLRPHRSAQSMWAYLKKVYHQDNDARRFQLEHAIAMFQHGSLSIQDYYSAFLTLWHEYADLVTADVPIAALSTIQXIHATTRRDQFLMKLRPEYESVRSSLLNRSPVPSLDICFGELLREEQRLSTQAILEQSHGSSGTTTVAYAAQGR---GPPMHSKNLQCFCCKEYGHIAATCPKKFCSYCKKKGHIIKECRIRPQNRQAQAFQTSVIVPPVATHDSPSAACSVPAPPAPDYCTPEMVQRILISALSAMGFQGNNST--KLWYVDSGASNHMTNNPTALCHVRPYAGQSSIQTANGSSLPIAAIGDASSKFTDVFLAPQLSTNLISVGQLVDNNCAVNFSGNGCVVQDQVTGKPIAKGPKVGRLFPLFLPIPDFSPRSSIKSFACNNVSDLSMVWHRRLGHPNTQILSHVLNSDLPGNKDRYSLS---LECDSCKLGKSKTLPFPLHASRASHCFDLIHSDVWGPSPVSSHEKFKYYVTFIDDHSRFTWVYFLRSKSEVFXTFTEFLAYVDNQFSTSIKTLRTDSGGEYLSTEFQAFLASKGIIHQRSCPSTPQQNGVAERKNRHLLDVVRTLLLESSVPSMFWVEALKTATHLINRLPSQVLHMESPYFRLFAKQPSYDHLRIFGCVCFVHLPPHERHKLSAQSVRCAFLGYNMCQKGFVCYDPTLHRTRISRNVIFFENQHFFPVSSSTVSSSSTVVLPSFE--QQFSDLHPVSSCFQPGIVYTRRSRP 803
Match: A0A438F4G5 ((Retrovirus-related Pol polyprotein from transposon TNT 1-94 {ECO:0000313|EMBL:RVW54910.1}))
HSP 1 Score: 875.93 bits (2262), Expect = 0.000e+0
Identity = 438/803 (54.55%), Postives = 551/803 (68.62%), Query Frame = 0
Query: 163 NYSAWSFQFEILVKGKELWGYVDGTE-SAPDSKEKEKLA----KWKVKDAQIMSWILGSMEPSMILNLRPYKSSKDMWGYLKKVYNQSNAARRFQLELELGQLSQGSMTIQEFYSSFENLWNEYTDIVYESVSAEGLVAVQSVHETSKRDQFLMKLRGDFEPVRSNLMNRNPVPSIDTCIGELFREEQRLMTQTFIDQKSQNSSPIPVAYVAQGKHRGGRDM--SNIQCYSCKGFGHVATNCTKKFCNYCKKAGHTIKDCPIRPPKKSETAYNVSV--------GSSNAPNFGQSS--------VTPEMIQQMIVNAFSTLGISGNKNSAHKPWYFDSAASNHMTSTTVPLNNVQKYKGDLHIQTADGNSLPITAVGDISTSLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGCFVQDQVSGKMIAKGPKVGRLFPL-LPSPSLVSNY----VSCNAVDCNNQVWHKRLGHPNSHVLSILLKSGLLGNKVSNSSNTDNIHCASCKLGKSKTLPFPSRKSHTTKAFELVHTDVWGISPVVSHQHYKYFVTFIDDFSRYTWVYFLRYKSEVFKAFQTFHALIETQFSAKIRILQSDSGGEYTSNEFQSFLQNHGIISQRSCPSTPQQNGVAERKNRHLLDVVRTLLIESCVPSHFWCEALSTAVYLINRLPSPTLNNESPYLRLYEDAPDYSDLHIFGCVCFVHLQPHERNKLTAQSVKCAFLGYGGTQNGFLCYDPNTRRIRVSRNVIFFENQSFF-------CTQMTSQLPSIAILPHFPESSAPSQRFKPGHVYHRRTSP 930
NYS W+FQFE+ +KGK+LWG++DGT+ P + EK + W V DA+IMSW+LGS+EP ++ +LRP++S++ MW YLKKVY+Q N ARRFQLE + GS++IQ++YS+F LW+EY D+V V L +Q++H T++RDQFLMKLR ++E VRS+L+NR+ VPS+D C GEL REEQRL TQ ++Q +S VAY QG+ G M N+QC+ CK +GH+A C KKFC+YCKK GH IK+C IRP + A+ SV + ++P+ S TPEM+QQM+++A S +G GN ++ K WY DS ASNHMT+ L +V+ Y G IQTA+G+SLPI +GD S+ VF++P+LSTNLISVGQLVDNNC V FS +GC VQDQV+GK IAKGPKVGRLFPL LP P Y +CN V + VWH+RLGHPN+ +LS +L S L GNK S + + C SCKLGKSKTLPFP S + F+L+H+DVWG SP+ S++ +KY+VTFIDD SR+TWVYFLR KSEVF+ F F A I+ QFS I+ L++DSGGEY S EFQ+FL + GII QRSCPSTPQQNGV +RKNRHLLDVVRTLL+ES VPS FW EAL TA +LINRLPS L+ ESPY RL+ P Y L IFGCVCFV L PHER+KL+AQSV+CAFLGY Q GF+CYDP R R+SRNVIFFENQ FF + T LPS F + S RF+P VY RR+ P
Sbjct: 14 NYSTWAFQFELFLKGKDLWGHIDGTDVEKPSTFEKSQDVGFSPSWVVLDARIMSWLLGSVEPHIVTHLRPHRSAQSMWAYLKKVYHQDNNARRFQLEHAIAMFQHGSLSIQDYYSAFLTLWHEYADLVTADVPIAALSTIQTIHATTRRDQFLMKLRPEYESVRSSLLNRSHVPSLDICFGELLREEQRLSTQAILEQSHGSSGTATVAYATQGR---GPPMHSKNLQCFCCKEYGHIAATCPKKFCSYCKKKGHIIKECRIRPQNRQAQAFQTSVIVPPIATSATHDSPSTTCSVPAPPAPDYCTPEMVQQMLISALSAMGFQGNNST--KLWYVDSGASNHMTNNPTALCHVRPYTGQSSIQTANGSSLPIATIGDASSKFTDVFLAPQLSTNLISVGQLVDNNCAVNFSGNGCVVQDQVTGKPIAKGPKVGRLFPLFLPVPDFSPLYSIKSFACNNVSDLSMVWHRRLGHPNTQILSHVLNSDLPGNKDRYSLS---LECDSCKLGKSKTLPFPLHASRASHCFDLIHSDVWGPSPISSYEKFKYYVTFIDDHSRFTWVYFLRSKSEVFRTFTEFLAYIDNQFSTSIKTLRTDSGGEYLSTEFQAFLASKGIIHQRSCPSTPQQNGVVKRKNRHLLDVVRTLLLESSVPSMFWVEALKTATHLINRLPSQVLHMESPYFRLFAKQPSYDHLRIFGCVCFVRLPPHERHKLSAQSVRCAFLGYNMCQKGFVCYDPTLHRTRISRNVIFFENQHFFPVSSSTASSSSTVVLPSFE--QQFSDLHPVSSRFQPSIVYTRRSRP 806
Match: A0A2N9GB15 ((Uncharacterized protein {ECO:0000313|EMBL:SPC96660.1}))
HSP 1 Score: 863.603 bits (2230), Expect = 0.000e+0
Identity = 448/839 (53.40%), Postives = 562/839 (66.98%), Query Frame = 0
Query: 153 RVVGNDSGE-------KNYSAWSFQFEILVKGKELWGYVDGTESAPDSKEKEKLAKWKVKDAQIMSWILGSMEPSMILNLRPYKSSKDMWGYLKKVYNQSNAARRFQLELELGQLSQGSMTIQEFYSSFENLWNEYTDIVYESVSAEGLVAVQSVHETSKRDQFLMKLRGDFEPVRSNLMNRNPVPSIDTCIGELFREEQRLMTQTFIDQKSQNSSPIPVAYVAQGKHRGGRDMSNIQCYSCKGFGHVATNCTKKFCNYCKKAGHTIKDCPIRPPKKSETAYNVSVGSSNAPNFG-----------QSSVTPEMIQQMIVNAFSTLGISGNKNSAHKPWYFDSAASNHMTSTTVPLNNVQKYKGDLHIQTADGNSLPITAVGDISTSLNTVFVSPKLSTNLISVGQLVDNNCTVQFSNSGCFVQDQVSGKMIAKGPKVGRLFPL-LPSPSLVSNYVS--CNAVDCNNQVWHKRLGHPNSHVLSILLKSGLLGNKVSNSSNTDNIHCASCKLGKSKTLPFPSRKSHTTKAFELVHTDVWGISPVVSHQHYKYFVTFIDDFSRYTWVYFLRYKSEVFKAFQTFHALIETQFSAKIRILQSDSGGEYTSNEFQSFLQNHGIISQRSCPSTPQQNGVAERKNRHLLDVVRTLLIESCVPSHFWCEALSTAVYLINRLPSPTLNNESPYLRLYEDAPDYSDLHIFGCVCFVHLQPHERNKLTAQSVKCAFLGYGGTQNGFLCYDPNTRRIRVSRNVIFFENQSFFCTQMTSQLPSIAILPHFPESSAPS----QRFKPGHVYHRRTSPTMAPATLSDAPDPVLPSSNDPPPVRRSSRNSKPPDR 966
RV GN + KNY+AW FQ E +KGK LWG++DG+ S+ + K QIMS +K MW YLK+VY+Q N ARRF LEL + +QG +++Q++YS F LWN+Y+D+V VSAEGL +VQ VH TS+RDQFLMKLR +FE +R++L+NR+PVP+++ C GEL REEQRL TQ ++Q S+ + VAY A GK + GRDMS QCYSCK +GH+A NC +KFCNYCK+ GH IK+C IR P +S AY+ V + P S+T EM+Q+MIV+AFS LG G +S W DS ASNHMT++ L+NV++Y G HIQTA+ +SVGQLVD + V F++ GC VQDQ+SG++IAKGPK GRLF L +P+P + ++S CN + +VWHKRLGHPNS +LS LLKSGLL NK SS + CA+CKLGKSK LPFPS S T +FE++H+DVWGISP +SH YKYFVTFIDD+S+YTWVYFLR+KSEVF F+ F AL++TQFSA ++IL+SDSGGEY S+EFQSFL + GIISQRSCP TPQQNGVAERKNRHLLDVVRTLLIES VP FW EAL+TA +LINRLPS LN ESPY RLY P Y++LH FGCVCF+HL P +RNKL+AQS++CAFLGY TQ G++CYDP + R+RVSRNV+FFENQ FF +S+ P +A LP F ++ +RF+PG VY RR SP + P+ P+LP P P+RRSSR S PPDR
Sbjct: 271 RVYGNQADNVCVRFTGKNYTAWEFQLETFLKGKALWGHIDGSSKGGSSEADKAAWAAKDN--QIMS-------------------AKAMWDYLKQVYHQDNNARRFHLELAIANYTQGDLSVQDYYSGFLTLWNDYSDLVTAKVSAEGLASVQHVHRTSQRDQFLMKLRPEFESIRASLVNRDPVPTLEACFGELLREEQRLNTQNLMEQSRIASNTVSVAYAAHGKGK-GRDMSTTQCYSCKKYGHIAPNCPQKFCNYCKQPGHIIKECTIR-PSRSTKAYHAVVTDDSQPAANAVSSAVVLQPPAPSLTREMVQEMIVSAFSALGFQGTGSSP--SWILDSGASNHMTNSLHGLSNVREYCGSSHIQTAN-----------------------------VSVGQLVDQDYGVNFTHDGCVVQDQMSGQVIAKGPKHGRLFSLQIPAPRNLPPFLSLLCNKSRVSPEVWHKRLGHPNSRILSYLLKSGLLNNKEHFSSAVFS-DCATCKLGKSKILPFPSEGSRATHSFEIIHSDVWGISPTISHAQYKYFVTFIDDYSKYTWVYFLRHKSEVFPMFKLFLALVQTQFSATVKILRSDSGGEYMSHEFQSFLHSKGIISQRSCPYTPQQNGVAERKNRHLLDVVRTLLIESSVPPKFWVEALTTATFLINRLPSQALNLESPYFRLYHHHPTYTNLHTFGCVCFMHLPPPDRNKLSAQSIRCAFLGYSVTQKGYVCYDPTSNRVRVSRNVLFFENQWFFPMSSSSESP-VAFLPSFDDTLHDPRPLIERFQPGMVYQRR-SPVLPPSA------PILP----PVPLRRSSRVSAPPDR 1042
| Match Name | Stats | Description |
|---|---|---|
| A0A2I0ACR9 | E-Value: 0.000e+0, PID: 79.26 | (Retrovirus-related Pol polyprotein from transposo... [more] |
| A0A445KL17 | E-Value: 0.000e+0, PID: 61.81 | (Retrovirus-related Pol polyprotein from transposo... [more] |
| A0A2N9ETU9 | E-Value: 0.000e+0, PID: 57.47 | (Uncharacterized protein {ECO:0000313|EMBL:SPC7825... [more] |
| A0A2N9GSB4 | E-Value: 0.000e+0, PID: 57.47 | (Uncharacterized protein {ECO:0000313|EMBL:SPD0237... [more] |
| A0A2K3NBK9 | E-Value: 0.000e+0, PID: 54.36 | (Retrovirus-related Pol polyprotein from transposo... [more] |
| A0A2N9IUF9 | E-Value: 0.000e+0, PID: 55.65 | (Uncharacterized protein {ECO:0000313|EMBL:SPD2902... [more] |
| A0A438JYT1 | E-Value: 0.000e+0, PID: 55.18 | (Retrovirus-related Pol polyprotein from transposo... [more] |
| A5BNN7 | E-Value: 0.000e+0, PID: 55.38 | (Uncharacterized protein {ECO:0000313|EMBL:CAN7479... [more] |
| A0A438F4G5 | E-Value: 0.000e+0, PID: 54.55 | (Retrovirus-related Pol polyprotein from transposo... [more] |
| A0A2N9GB15 | E-Value: 0.000e+0, PID: 53.40 | (Uncharacterized protein {ECO:0000313|EMBL:SPC9666... [more] |
| Name | Description |
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An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |
