Resource Type:
Polypeptide
Name:
XM_017382146.1
Identifier:
XM_017382146.1-protein
Sequence:
MLADLDFSTSLLYGLITFTTLYLIKNFTSIYKGLFPSKASKLPRSFPIFG
SYFTILKNLHHFNNWSSEIVNSQPSNTVVFHRVLGQRQVVTSNPANVQHM
LKTKFSVYQKGSFGAKILYDFLGHGIFNVDGESWKFQRQLASHEFNTKSL
RKFVGTVVDTELTDRLVPILNQAVENQEVLEFQDILQRFAFDNICSIAFG
YDPEYLLPSLPEAKFAVAFEKATLLTSKRFRKILPLVWKIQKVFNFGSEK
ELKECVEVVRDFAREVMREKKEELEQKSELQTVDLLSRFLASGHSDEVFV
TDMVISFILAGRDTTSAALTWFFYLIARHPHVESQILAEINEKKFEKNSD
TSVYDEVKDMIYTHAALCESMRLYPPVPTDGKQATEDDVLPDGTVVHKGD
RVVYHPYAMGRSEKLWGKDWAVFRPERWLEKDGVTGKWSFVGRDQYTYPV
FQAGPRVCLGKEMAFLQMKRVVAGVLPEFRVVPMIEKGKEPVFVSYLTAK
MQGGFPVKIQQRT
Sequence Length:
513
Sequence Checksum:
017fc4f4afbbf02bde06048c5a1bfb41
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017382146.1, derives from mRNA, XM_017382146.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017382146.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017382146.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: Q8W2N4 ((Cytochrome P450-dependent fatty acid hydroxylase {ECO:0000313|EMBL:AAL54884.1}))
HSP 1 Score: 701.049 bits (1808), Expect = 0.000e+0
Identity = 336/511 (65.75%), Postives = 404/511 (79.06%), Query Frame = 0
Match: Q8W2N4 ((Cytochrome P450-dependent fatty acid hydroxylase {ECO:0000313|EMBL:AAL54884.1}))
HSP 1 Score: 701.049 bits (1808), Expect = 0.000e+0
Identity = 336/511 (65.75%), Postives = 404/511 (79.06%), Query Frame = 0
Query: 2 LADLDFSTSLLYGLITFTTLYLIKNFTSIYKGLFPSKASKLPRSFPIFGSYFTILKNLHHFNNWSSEIVNSQPSNTVVFHRVLGQRQVVTSNPANVQHMLKTKFSVYQKGSFGAKILYDFLGHGIFNVDGESWKFQRQLASHEFNTKSLRKFVGTVVDTELTDRLVPILNQAVENQEVLEFQDILQRFAFDNICSIAFGYDPEYLLPSLPEAKFAVAFEKATLLTSKRFRKILPLVWKIQKVFNFGSEKELKECVEVVRDFAREVMREKKEELEQKSELQTVDLLSRFLASGHSDEVFVTDMVISFILAGRDTTSAALTWFFYLIARHPHVESQILAEINEKKFEKNSDTSVYDEVKDMIYTHAALCESMRLYPPVPTDGKQATEDDVLPDGTVVHKGDRVVYHPYAMGRSEKLWGKDWAVFRPERWLEKDGVTGKWSFVGRDQYTYPVFQAGPRVCLGKEMAFLQMKRVVAGVLPEFRVVPMIEKGKEPVFVSYLTAKMQGGFPVKIQQR 512
L DL STSLL+ L+ L+ IK +I L S +SK+PRS+P+ GSYF+IL N W S+I+ S P+ T R L + T+NP+NVQHMLKT F VYQKG L DFL +GIFNVDG+ WK+QRQ+ASHEFNT+SLRKFV TVVDTEL++RL+PIL A N+ VL+FQDILQRFAFDNIC IAFGYDP YLLPSLPEA+FAVAFE A L+++RF PL+WK+++ N GSEK+L+ VE VR+FA+E++REK+ EL+ KS L + DLLSRFL++GHSDE FVTD+VISFILAGRDTTSAALTWFF+LI++HP VESQIL EI EK+ +YDEVK+MIYTHA+LCESMR YPPVP D K+AT+DD+LPDGT V KG+RV YHPYAMGR EK+WGKDWA FRPERWL+KD VTG W+FV +D YTYPVFQAGPRVCLGKEMAFLQMKRVVAGVL F+VVP++E+G EPVF+SYLTAKM+ FPV I++R
Sbjct: 3 LLDLQPSTSLLFCLVPLLFLFFIKFNKTITNTLLSSNSSKIPRSYPLIGSYFSILANHDQRIKWISDIILSTPNLTFTLIRPLNFHTIFTANPSNVQHMLKTNFQVYQKGHNSNTTLKDFLSNGIFNVDGDIWKYQRQVASHEFNTRSLRKFVETVVDTELSERLIPILATAAANKTVLDFQDILQRFAFDNICKIAFGYDPGYLLPSLPEAEFAVAFEDAVRLSTERFILPFPLIWKMKRALNIGSEKKLRFAVEQVREFAKEIVREKQRELKDKSSLDSADLLSRFLSTGHSDENFVTDIVISFILAGRDTTSAALTWFFWLISKHPEVESQILKEIG----EKSESLLLYDEVKNMIYTHASLCESMRFYPPVPMDTKEATKDDILPDGTFVKKGNRVTYHPYAMGRVEKVWGKDWAEFRPERWLDKDEVTGNWTFVSKDAYTYPVFQAGPRVCLGKEMAFLQMKRVVAGVLRRFKVVPVVEQGAEPVFISYLTAKMKEVFPVTIEER 509
BLAST of XM_017382146.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A314L1D0 ((Cytochrome p450 94b1 {ECO:0000313|EMBL:OIT35420.1}))
HSP 1 Score: 700.664 bits (1807), Expect = 0.000e+0
Identity = 338/512 (66.02%), Postives = 402/512 (78.52%), Query Frame = 0
Match: A0A314L1D0 ((Cytochrome p450 94b1 {ECO:0000313|EMBL:OIT35420.1}))
HSP 1 Score: 700.664 bits (1807), Expect = 0.000e+0
Identity = 338/512 (66.02%), Postives = 402/512 (78.52%), Query Frame = 0
Query: 2 LADLDFSTSLLYGLITFTTLYLIK-NFTSIYKGLFPSKASKLPRSFPIFGSYFTILKNLHHFNNWSSEIVNSQPSNTVVFHRVLGQRQVVTSNPANVQHMLKTKFSVYQKGSFGAKILYDFLGHGIFNVDGESWKFQRQLASHEFNTKSLRKFVGTVVDTELTDRLVPILNQAVENQEVLEFQDILQRFAFDNICSIAFGYDPEYLLPSLPEAKFAVAFEKATLLTSKRFRKILPLVWKIQKVFNFGSEKELKECVEVVRDFAREVMREKKEELEQKSELQTVDLLSRFLASGHSDEVFVTDMVISFILAGRDTTSAALTWFFYLIARHPHVESQILAEINEKKFEKNSDTSVYDEVKDMIYTHAALCESMRLYPPVPTDGKQATEDDVLPDGTVVHKGDRVVYHPYAMGRSEKLWGKDWAVFRPERWLEKDGVTGKWSFVGRDQYTYPVFQAGPRVCLGKEMAFLQMKRVVAGVLPEFRVVPMIEKGKEPVFVSYLTAKMQGGFPVKIQQR 512
L DL STSLL+ L+ L+ IK T + L S SK+PRS+P+ GSYF+IL N W S+I+ S P+ T R L R + T+NP+ VQHMLKT F VYQKG L DFL +GIFNVDG+ WK+QRQ+ASHEFNT+SLRKFV TVVDTEL++RL+PIL A N+ VL+FQDILQRFAFDNIC IAFGYDP YLLPSLPEA+FAVAFE A L+S+RF PL+WKI++ N GSEK+L+ VE VR+FA+E++REK+ EL KS L + DLLSRFL++GHSDE FVTD+VISFILAGRDTTSAALTWFF+LI++HP VESQI+ EI EK +YDEVK+M+YTHA+LCESMR YPPVP D K+AT+DD+LPDGT V KG RV YHPYAMGR EK+WGKDWA FRPERWL+KD VTG W+FV +D YTYPVFQAGPRVCLGKEMAFLQMKRVVAGVL F+VVP++E+G EPVF+SYLTAKM+GGFPV I++R
Sbjct: 3 LLDLHLSTSLLFCLVPLLFLFFIKFKKTIVTNTLLSSNDSKIPRSYPLIGSYFSILANQDQRIKWISDIILSTPNLTFTLIRPLNFRTIFTANPSIVQHMLKTNFQVYQKGHNSNTTLKDFLSNGIFNVDGDIWKYQRQVASHEFNTRSLRKFVETVVDTELSERLIPILATAAANKTVLDFQDILQRFAFDNICKIAFGYDPGYLLPSLPEAEFAVAFEDAVRLSSERFILPFPLIWKIKRALNIGSEKKLRVAVEQVREFAKEIVREKQRELNDKSSLDSADLLSRFLSTGHSDEDFVTDIVISFILAGRDTTSAALTWFFWLISKHPEVESQIMKEIGEKP----ESLLLYDEVKNMMYTHASLCESMRFYPPVPIDSKEATKDDILPDGTFVKKGTRVTYHPYAMGRVEKVWGKDWAEFRPERWLDKDEVTGNWTFVPKDAYTYPVFQAGPRVCLGKEMAFLQMKRVVAGVLRRFKVVPVVEQGAEPVFISYLTAKMKGGFPVTIEER 510
BLAST of XM_017382146.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A068U6D9 ((Uncharacterized protein {ECO:0000313|EMBL:CDP03714.1}))
HSP 1 Score: 698.738 bits (1802), Expect = 0.000e+0
Identity = 334/512 (65.23%), Postives = 416/512 (81.25%), Query Frame = 0
Match: A0A068U6D9 ((Uncharacterized protein {ECO:0000313|EMBL:CDP03714.1}))
HSP 1 Score: 698.738 bits (1802), Expect = 0.000e+0
Identity = 334/512 (65.23%), Postives = 416/512 (81.25%), Query Frame = 0
Query: 2 LADLDFSTSLLYGLITFTTLYLIKNFTSIYKGLFPSKASKLPRSFPIFGSYFTILKNLHHFNNWSSEIVNSQPSNTVVFHRVLGQRQVVTSNPANVQHMLKTKFSVYQKGSFGAKILYDFLGHGIFNVDGESWKFQRQLASHEFNTKSLRKFVGTVVDTELTDRLVPILNQAVENQEVLEFQDILQRFAFDNICSIAFGYDPEYLLPSLPEAKFAVAFEKATLLTSKRFRKILPLVWKIQKVFNFGSEKELKECVEVVRDFAREVMREKKEELEQKSELQTVDLLSRFLASGHSDEVFVTDMVISFILAGRDTTSAALTWFFYLIARHPHVESQILAEINEKKFEKNSDTSVYDEVKDMIYTHAALCESMRLYPPVPTDGKQATEDDVLPDGTVVHKGDRVVYHPYAMGRSEKLWGKDWAVFRPERWLEKDGVTGKWSFVGRDQYTYPVFQAGPRVCLGKEMAFLQMKRVVAGVLPEFRVVPMIEKGKEPVFVSYLTAKMQGGFPVKIQQRT 513
+++ + S SLL LI + + + + LF SK+SK+PRS+P+ GSYF+IL N W+S+IV S P+ T HR LG R V+T+NP+ VQH+LK+ F VY KG L DFLG GIFN DG +WKFQRQ++SHEFNT+SLRKFV TVVDTEL++RLVPIL A +N+ VL+FQDILQRFAFDNIC IAFGYDP YLLPSLPEAKFAVAFE AT ++S+RF ++PL+WK+++ N GSE++LKE V+ VR+FA+++++EKK ELE+KS + +VDLLSRFL+SGHSDE FVTD+VISFILAGRDTTSAALTWFF+L+ +P+VE +I+ EI EK S++ YDEVKDM+YTHA+LCESMRLYPPVPTD K+ATEDDVLPDGTVV KG RV YHPYAMGR E++WG DWA F+PERWLE++G++GKW+FVG+D YTYPVFQAGPR+CLGKEMAFLQMKRVVAGVL F+VVP IE+G EPVF++YLT+KM+GGFPV+I +R
Sbjct: 1 MSNFELSASLLLCLIPLFCFFFVYFNKTFVRNLFASKSSKIPRSYPLIGSYFSILANKERRVQWTSDIVRSSPNFTFTLHRPLGHRLVLTANPSTVQHILKSHFHVYGKGDVFRTTLSDFLGEGIFNTDGANWKFQRQVSSHEFNTRSLRKFVETVVDTELSERLVPILAAAADNKTVLDFQDILQRFAFDNICKIAFGYDPAYLLPSLPEAKFAVAFEDATRISSERFNSLVPLIWKVKRALNVGSERKLKEAVDQVREFAKQIIKEKKAELEEKSSIDSVDLLSRFLSSGHSDEDFVTDIVISFILAGRDTTSAALTWFFWLVFGNPNVEKKIVEEIKEK-----SESPEYDEVKDMVYTHASLCESMRLYPPVPTDTKEATEDDVLPDGTVVRKGTRVTYHPYAMGRIEEVWGSDWAEFKPERWLEREGLSGKWNFVGKDSYTYPVFQAGPRICLGKEMAFLQMKRVVAGVLRRFKVVPAIEEGVEPVFMAYLTSKMKGGFPVRIFERA 507
BLAST of XM_017382146.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S4B2K9 ((cytochrome P450 94A2-like {ECO:0000313|RefSeq:XP_016483167.1}))
HSP 1 Score: 696.427 bits (1796), Expect = 0.000e+0
Identity = 333/515 (64.66%), Postives = 403/515 (78.25%), Query Frame = 0
Match: A0A1S4B2K9 ((cytochrome P450 94A2-like {ECO:0000313|RefSeq:XP_016483167.1}))
HSP 1 Score: 696.427 bits (1796), Expect = 0.000e+0
Identity = 333/515 (64.66%), Postives = 403/515 (78.25%), Query Frame = 0
Query: 1 MLADLDFSTSLLYGLITFTTLYLIKNFTSIYKGLFPSK--ASKLPRSFPIFGSYFTILKNLHHFNNWSSEIVNSQPSNTVVFHRVLGQRQVVTSNPANVQHMLKTKFSVYQKGSFGAKILYDFLGHGIFNVDGESWKFQRQLASHEFNTKSLRKFVGTVVDTELTDRLVPILNQAVENQEVLEFQDILQRFAFDNICSIAFGYDPEYLLPSLPEAKFAVAFEKATLLTSKRFRKILPLVWKIQKVFNFGSEKELKECVEVVRDFAREVMREKKEELEQKSELQTVDLLSRFLASGHSDEVFVTDMVISFILAGRDTTSAALTWFFYLIARHPHVESQILAEINEKKFEKNSDTSVYDEVKDMIYTHAALCESMRLYPPVPTDGKQATEDDVLPDGTVVHKGDRVVYHPYAMGRSEKLWGKDWAVFRPERWLEKDGVTGKWSFVGRDQYTYPVFQAGPRVCLGKEMAFLQMKRVVAGVLPEFRVVPMIEKGKEPVFVSYLTAKMQGGFPVKIQQRT 513
M+ DL+ STSLL+ LI F L+ IK + +FPS SK+P+S+PI GSYF+IL N W+ +++ + + T +R G RQ+ T+NP+NVQHMLKT+F +YQKG+ + DFLG GIFNVDG+ WK+QRQ+ASHEFNTKSLR FV TVVDTEL +RL+PIL A + V++FQDILQRFAFDNIC IAFGYDP YLLPSLP+AKFAVAFE+A L+S+R I P +WKI++ N GSEK+ V+ VR FA+E+++EK+ EL++K+ L++VDLLSRFL++GHSDE FVTD+VISFILAGRDTTSAALTWFF+LI+ HP VESQIL EI K S+ VYDEVKDMIYTHA+LCESMR YPPVP D K A ED++LPDGT V KG RV YHPYAMGR EKL GKDWA FRPERWL+KD V+ W+FV D YTYPVFQAGPR+CLGKEMAFLQMKRVVAGVL F+VVP++EKG EPVFVSYLTAKM+GGFPV I++R
Sbjct: 1 MMIDLELSTSLLFCLIPFLFLFFIK---TTLTNVFPSSKSTSKIPKSYPIIGSYFSILANKDRRIQWTCDVIQNTSNLTFTLNRPFGFRQIFTANPSNVQHMLKTQFHIYQKGNVLKTTMADFLGDGIFNVDGDIWKYQRQVASHEFNTKSLRNFVETVVDTELNERLIPILATAAAKKTVVDFQDILQRFAFDNICKIAFGYDPAYLLPSLPQAKFAVAFEEAVRLSSERVNAIFPFLWKIKRKLNIGSEKKFGAAVDEVRQFAKELVKEKQRELKEKTSLESVDLLSRFLSTGHSDENFVTDIVISFILAGRDTTSAALTWFFWLISGHPEVESQILKEIKAK-----SECPVYDEVKDMIYTHASLCESMRFYPPVPIDSKAAAEDNILPDGTFVKKGTRVSYHPYAMGRVEKLRGKDWAEFRPERWLDKDDVSDNWTFVAMDTYTYPVFQAGPRICLGKEMAFLQMKRVVAGVLRRFKVVPVVEKGVEPVFVSYLTAKMKGGFPVTIEERN 507
BLAST of XM_017382146.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6UXV8 ((cytochrome P450 94A1-like {ECO:0000313|RefSeq:XP_027095390.1}))
HSP 1 Score: 696.427 bits (1796), Expect = 0.000e+0
Identity = 333/512 (65.04%), Postives = 418/512 (81.64%), Query Frame = 0
Match: A0A6P6UXV8 ((cytochrome P450 94A1-like {ECO:0000313|RefSeq:XP_027095390.1}))
HSP 1 Score: 696.427 bits (1796), Expect = 0.000e+0
Identity = 333/512 (65.04%), Postives = 418/512 (81.64%), Query Frame = 0
Query: 2 LADLDFSTSLLYGLITFTTLYLIKNFTSIYKGLFPSKASKLPRSFPIFGSYFTILKNLHHFNNWSSEIVNSQPSNTVVFHRVLGQRQVVTSNPANVQHMLKTKFSVYQKGSFGAKILYDFLGHGIFNVDGESWKFQRQLASHEFNTKSLRKFVGTVVDTELTDRLVPILNQAVENQEVLEFQDILQRFAFDNICSIAFGYDPEYLLPSLPEAKFAVAFEKATLLTSKRFRKILPLVWKIQKVFNFGSEKELKECVEVVRDFAREVMREKKEELEQKSELQTVDLLSRFLASGHSDEVFVTDMVISFILAGRDTTSAALTWFFYLIARHPHVESQILAEINEKKFEKNSDTSVYDEVKDMIYTHAALCESMRLYPPVPTDGKQATEDDVLPDGTVVHKGDRVVYHPYAMGRSEKLWGKDWAVFRPERWLEKDGVTGKWSFVGRDQYTYPVFQAGPRVCLGKEMAFLQMKRVVAGVLPEFRVVPMIEKGKEPVFVSYLTAKMQGGFPVKIQQRT 513
++ + S SLL LI + + F + + LF SK+SK+PRS+P+ GSYF+IL N W+S+IV S P+ T HR LG R V+T+NP+ VQH+LK+ F VY KG + L DFLG GIFN DG++WKFQRQ++SHEFNTKSLRKFV TVVDTEL++RLVPIL A +N+ VL+FQDILQRFAFDNIC IAFGYDP YLLPSLPEA+FAVAF+ AT ++S+RF +PL+WK+++ N GSE++LKE V+ +R+FA+++++EKK ELE+KS + +VDLLSRFL+SGHSDE FVTD+VISFILAGRDTTSAALTWFF+L+ +P+VE +I+ EI EK S++ VYDEVKDM+YTHA+LCESMRLYPPVPTD K+ATEDDVLPDGTVV KG RV YHPYAMGR E++WG +WA F+PERWLE+DG++GKW+FVG+D YTYPVFQAGPR+CLGKEMAFLQMKRV+AGVL F+VVP IE+G EPVF++YLT+KM+GGFPV+I +R
Sbjct: 1 MSTFELSASLLLCLIPLFCFFFVY-FKTFVRNLFASKSSKIPRSYPLIGSYFSILANNERRVQWTSDIVRSSPNLTFTLHRPLGHRLVLTANPSTVQHILKSHFHVYGKGDVFRRTLSDFLGEGIFNTDGDNWKFQRQVSSHEFNTKSLRKFVETVVDTELSERLVPILAAAADNKTVLDFQDILQRFAFDNICKIAFGYDPAYLLPSLPEAEFAVAFDDATRISSERFNTPVPLIWKVKRALNVGSERKLKEAVDQIREFAKQIIKEKKAELEEKSSIDSVDLLSRFLSSGHSDEDFVTDIVISFILAGRDTTSAALTWFFWLVFGNPNVEKKIVEEIKEK-----SESPVYDEVKDMVYTHASLCESMRLYPPVPTDTKEATEDDVLPDGTVVRKGTRVTYHPYAMGRIEEVWGSNWAEFKPERWLERDGLSGKWNFVGKDSYTYPVFQAGPRICLGKEMAFLQMKRVIAGVLRRFKVVPAIEEGVEPVFMAYLTSKMKGGFPVRIFERA 506
BLAST of XM_017382146.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S3XQ38 ((cytochrome P450 94A2-like {ECO:0000313|RefSeq:XP_016442053.1}))
HSP 1 Score: 694.501 bits (1791), Expect = 0.000e+0
Identity = 331/514 (64.40%), Postives = 401/514 (78.02%), Query Frame = 0
Match: A0A1S3XQ38 ((cytochrome P450 94A2-like {ECO:0000313|RefSeq:XP_016442053.1}))
HSP 1 Score: 694.501 bits (1791), Expect = 0.000e+0
Identity = 331/514 (64.40%), Postives = 401/514 (78.02%), Query Frame = 0
Query: 1 MLADLDFSTSLLYGLITFTTLYLIKNFTSIYKGLFPSK--ASKLPRSFPIFGSYFTILKNLHHFNNWSSEIVNSQPSNTVVFHRVLGQRQVVTSNPANVQHMLKTKFSVYQKGSFGAKILYDFLGHGIFNVDGESWKFQRQLASHEFNTKSLRKFVGTVVDTELTDRLVPILNQAVENQEVLEFQDILQRFAFDNICSIAFGYDPEYLLPSLPEAKFAVAFEKATLLTSKRFRKILPLVWKIQKVFNFGSEKELKECVEVVRDFAREVMREKKEELEQKSELQTVDLLSRFLASGHSDEVFVTDMVISFILAGRDTTSAALTWFFYLIARHPHVESQILAEINEKKFEKNSDTSVYDEVKDMIYTHAALCESMRLYPPVPTDGKQATEDDVLPDGTVVHKGDRVVYHPYAMGRSEKLWGKDWAVFRPERWLEKDGVTGKWSFVGRDQYTYPVFQAGPRVCLGKEMAFLQMKRVVAGVLPEFRVVPMIEKGKEPVFVSYLTAKMQGGFPVKIQQR 512
M+ + + STSLL+ LI F L+ IK + LF S SK+P+S+PI GSYF+IL N+ W+ +++ + + T +R G RQ+ T+NPANVQHMLKT+F +YQKG+ + DFLG GIFNVDG+ WK+QRQ++SHEFNTKSLRKFV TVVDTEL +RL+PIL A + VL+FQDILQRFAFDNIC IAFGYDP YLLPSLP+AKFAVAFE A L+S+RF I P +WK+++ N GSEK L+ V+ VR FA+E+++EK+ EL + S L++VDLLSRFL++GHSDE FVTD+VISFILAGRDTTSAAL WFF+LI+ HP E++IL EI K S++ VYDEVKDMIYTHA+LCESMR YPP+P D K ATED++LPDGT V K RV YH YAMGR EKLWGKDWA FRPERWL+KD V+G WSFV D YTYPVFQAGPR+CLGKEMAFLQMKRVVAGVL F+VVP+ EKG EPVFVSYLTAKM+GGFPV I++R
Sbjct: 2 MIVEWELSTSLLFCLIPFLFLFFIK---TTLTNLFSSNKSTSKIPKSYPIIGSYFSILANIERRIQWTCDVIQNTSTLTFTLNRPFGFRQIFTANPANVQHMLKTQFHIYQKGNVFKTTMADFLGDGIFNVDGDIWKYQRQVSSHEFNTKSLRKFVETVVDTELNERLIPILATAASKKTVLDFQDILQRFAFDNICKIAFGYDPAYLLPSLPQAKFAVAFEDAVKLSSERFNAIFPFLWKVKRKLNIGSEKILRAAVDNVRQFAKELVKEKQRELNENSSLESVDLLSRFLSTGHSDEDFVTDIVISFILAGRDTTSAALAWFFWLISEHPKTENEILKEIKAK-----SESPVYDEVKDMIYTHASLCESMRFYPPIPIDTKAATEDNILPDGTFVKKETRVSYHIYAMGRVEKLWGKDWAEFRPERWLDKDDVSGNWSFVAMDTYTYPVFQAGPRICLGKEMAFLQMKRVVAGVLRRFKVVPVAEKGVEPVFVSYLTAKMKGGFPVTIEER 507
BLAST of XM_017382146.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: Q8W2N1 ((Cytochrome P450-dependent fatty acid hydroxylase {ECO:0000313|EMBL:AAL54887.1}) (cytochrome P450 94A1-like {ECO:0000313|RefSeq:XP_016492586.1}))
HSP 1 Score: 692.96 bits (1787), Expect = 0.000e+0
Identity = 330/512 (64.45%), Postives = 405/512 (79.10%), Query Frame = 0
Match: Q8W2N1 ((Cytochrome P450-dependent fatty acid hydroxylase {ECO:0000313|EMBL:AAL54887.1}) (cytochrome P450 94A1-like {ECO:0000313|RefSeq:XP_016492586.1}))
HSP 1 Score: 692.96 bits (1787), Expect = 0.000e+0
Identity = 330/512 (64.45%), Postives = 405/512 (79.10%), Query Frame = 0
Query: 2 LADLDFSTSLLYGLITFTTLYLIKNFTSIYKGLFPSK-ASKLPRSFPIFGSYFTILKNLHHFNNWSSEIVNSQPSNTVVFHRVLGQRQVVTSNPANVQHMLKTKFSVYQKGSFGAKILYDFLGHGIFNVDGESWKFQRQLASHEFNTKSLRKFVGTVVDTELTDRLVPILNQAVENQEVLEFQDILQRFAFDNICSIAFGYDPEYLLPSLPEAKFAVAFEKATLLTSKRFRKILPLVWKIQKVFNFGSEKELKECVEVVRDFAREVMREKKEELEQKSELQTVDLLSRFLASGHSDEVFVTDMVISFILAGRDTTSAALTWFFYLIARHPHVESQILAEINEKKFEKNSDTSVYDEVKDMIYTHAALCESMRLYPPVPTDGKQATEDDVLPDGTVVHKGDRVVYHPYAMGRSEKLWGKDWAVFRPERWLEKDGVTGKWSFVGRDQYTYPVFQAGPRVCLGKEMAFLQMKRVVAGVLPEFRVVPMIEKGKEPVFVSYLTAKMQGGFPVKIQQR 512
L DL STSLL+ L+ L+ +K +I L S +SK+PRS+P+ GSYF+IL N W S+I+ + P+ T R L R + T+NP+NVQH+LKT F VYQKG L DFL +GIFNVDG+ WK+QRQ+ASHEFNT+SLRKFV TVVDTEL++RL+PIL A N+ VL+FQDILQRFAFDNIC IAFGYDP YLLPSLPEA+FAVAFE A L+++RF L+WKI++ N GSEK+L+ VE VR+FA+E++REK++EL KS L + DLLSRFL++GHSDE FVTD+VISFILAGRDTTSAALTWFF+LI++HP VESQI+ E+ EK+ +YDEVK+M+YTHA+LCESMR YPPVP D K+AT+DD+LPDGT V KG RV YHPYAMGR EK+WG+DWA F+PERWL+KD VTG W+FV +D YTYPVFQAGPR+CLGKEMAFLQMKRVVAGVL F+VVP++E+G EPVF+SYLTAKM+GGFPV I++R
Sbjct: 3 LLDLQLSTSLLFCLVPLLFLFFVKFKKTITNTLLSSNNSSKIPRSYPLIGSYFSILANHDRRIKWISDIILTTPNLTFTLIRPLNFRTIFTANPSNVQHVLKTNFQVYQKGHGSYSTLKDFLSNGIFNVDGDIWKYQRQVASHEFNTRSLRKFVETVVDTELSERLIPILATAAANKTVLDFQDILQRFAFDNICKIAFGYDPGYLLPSLPEAEFAVAFEDAVRLSTERFIVPFSLIWKIKRALNIGSEKKLRVAVEQVREFAKEIVREKQKELNDKSSLDSADLLSRFLSTGHSDEDFVTDIVISFILAGRDTTSAALTWFFWLISKHPEVESQIMKEVG----EKSESLLLYDEVKNMMYTHASLCESMRFYPPVPMDSKEATKDDILPDGTFVKKGTRVTYHPYAMGRVEKVWGEDWAEFKPERWLDKDEVTGNWTFVPKDAYTYPVFQAGPRICLGKEMAFLQMKRVVAGVLRRFKVVPVVEQGVEPVFISYLTAKMKGGFPVTIEER 510
BLAST of XM_017382146.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7VBH5 ((cytochrome P450 94A1-like isoform X1 {ECO:0000313|RefSeq:XP_009763713.1}) (cytochrome P450 94A1-like isoform X2 {ECO:0000313|RefSeq:XP_009763715.1}))
HSP 1 Score: 692.96 bits (1787), Expect = 0.000e+0
Identity = 330/512 (64.45%), Postives = 405/512 (79.10%), Query Frame = 0
Match: A0A1U7VBH5 ((cytochrome P450 94A1-like isoform X1 {ECO:0000313|RefSeq:XP_009763713.1}) (cytochrome P450 94A1-like isoform X2 {ECO:0000313|RefSeq:XP_009763715.1}))
HSP 1 Score: 692.96 bits (1787), Expect = 0.000e+0
Identity = 330/512 (64.45%), Postives = 405/512 (79.10%), Query Frame = 0
Query: 2 LADLDFSTSLLYGLITFTTLYLIKNFTSIYKGLFPSK-ASKLPRSFPIFGSYFTILKNLHHFNNWSSEIVNSQPSNTVVFHRVLGQRQVVTSNPANVQHMLKTKFSVYQKGSFGAKILYDFLGHGIFNVDGESWKFQRQLASHEFNTKSLRKFVGTVVDTELTDRLVPILNQAVENQEVLEFQDILQRFAFDNICSIAFGYDPEYLLPSLPEAKFAVAFEKATLLTSKRFRKILPLVWKIQKVFNFGSEKELKECVEVVRDFAREVMREKKEELEQKSELQTVDLLSRFLASGHSDEVFVTDMVISFILAGRDTTSAALTWFFYLIARHPHVESQILAEINEKKFEKNSDTSVYDEVKDMIYTHAALCESMRLYPPVPTDGKQATEDDVLPDGTVVHKGDRVVYHPYAMGRSEKLWGKDWAVFRPERWLEKDGVTGKWSFVGRDQYTYPVFQAGPRVCLGKEMAFLQMKRVVAGVLPEFRVVPMIEKGKEPVFVSYLTAKMQGGFPVKIQQR 512
L DL STSLL+ L+ L+ +K +I L S +SK+PRS+P+ GSYF+IL N W S+I+ + P+ T R L R + T+NP+NVQH+LKT F VYQKG L DFL +GIFNVDG+ WK+QRQ+ASHEFNT+SLRKFV TVVDTEL++RL+PIL A N+ VL+FQDILQRFAFDNIC IAFGYDP YLLPSLPEA+FAVAFE A L+++RF L+WKI++ N GSEK+L+ VE VR+FA+E++REK++EL KS L + DLLSRFL++GHSDE FVTD+VISFILAGRDTTSAALTWFF+LI++HP VESQI+ E+ EK+ +YDEVK+M+YTHA+LCESMR YPPVP D K+AT+DD+LPDGT V KG RV YHPYAMGR EK+WG+DWA F+PERWL+KD VTG W+FV +D YTYPVFQAGPR+CLGKEMAFLQMKRVVAGVL F+VVP++E+G EPVF+SYLTAKM+GGFPV I++R
Sbjct: 3 LLDLQLSTSLLFCLVPLLFLFFVKFKKTITNTLLSSNNSSKIPRSYPLIGSYFSILANHDRRIKWISDIILTTPNLTFTLIRPLNFRTIFTANPSNVQHVLKTNFQVYQKGHGSYSTLKDFLSNGIFNVDGDIWKYQRQVASHEFNTRSLRKFVETVVDTELSERLIPILATAAANKTVLDFQDILQRFAFDNICKIAFGYDPGYLLPSLPEAEFAVAFEDAVRLSTERFIVPFSLIWKIKRALNIGSEKKLRVAVEQVREFAKEIVREKQKELNDKSSLDSADLLSRFLSTGHSDEDFVTDIVISFILAGRDTTSAALTWFFWLISKHPEVESQIMKEVG----EKSESLLLYDEVKNMMYTHASLCESMRFYPPVPMDSKEATKDDILPDGTFVKKGTRVTYHPYAMGRVEKVWGEDWAEFKPERWLDKDEVTGNWTFVPKDAYTYPVFQAGPRICLGKEMAFLQMKRVVAGVLRRFKVVPVVEQGVEPVFISYLTAKMKGGFPVTIEER 510
BLAST of XM_017382146.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7GDR4 ((Uncharacterized protein {ECO:0000313|EMBL:KAF5937456.1}))
HSP 1 Score: 690.263 bits (1780), Expect = 0.000e+0
Identity = 322/489 (65.85%), Postives = 398/489 (81.39%), Query Frame = 0
Match: A0A7J7GDR4 ((Uncharacterized protein {ECO:0000313|EMBL:KAF5937456.1}))
HSP 1 Score: 690.263 bits (1780), Expect = 0.000e+0
Identity = 322/489 (65.85%), Postives = 398/489 (81.39%), Query Frame = 0
Query: 26 NFTSIYKGLFPS-KASKLPRSFPIFGSYFTILKNLHHFNNWSSEIVNSQPSNTVVFHRVLGQRQVVTSNPANVQHMLKTKFSVYQKGSFGAKILYDFLGHGIFNVDGESWKFQRQLASHEFNTKSLRKFVGTVVDTELTDRLVPILNQAVENQEVLEFQDILQRFAFDNICSIAFGYDPEYLLPSLPEAKFAVAFEKATLLTSKRFRKILPLVWKIQKVFNFGSEKELKECVEVVRDFAREVMREKKEELEQKSELQTVDLLSRFLASGHSDEVFVTDMVISFILAGRDTTSAALTWFFYLIARHPHVESQILAEINEKKFEKNSDTSVYDEVKDMIYTHAALCESMRLYPPVPTDGKQATEDDVLPDGTVVHKGDRVVYHPYAMGRSEKLWGKDWAVFRPERWLEK-DGVTGKWSFVGRDQYTYPVFQAGPRVCLGKEMAFLQMKRVVAGVLPEFRVVPMIEKGKEPVFVSYLTAKMQGGFPVKIQQR 512
N SI+ S K++K PRS+P+ GS+ +I N W+S+IV S ++T V HR LG+RQV+T+NP+NVQH+LKT F +YQKG F ++D LG GIFNVDGE+WKFQRQ+ASHEFNTKSLRKFV TVVDTEL+DRL+PI + A N+ V + QDILQRF FDNIC IAFG+DP YLLPSLP+ KFA+AFE A ++S+RFR PL+WK +++ + GSEK+L+ V VR+FARE+++EKK+EL +KS L++VDLLSRF++SGHSDE FVTD+VISFILAGRDTTSAALTWFF+LI+RHP VE++IL EINEK S+ + ++EVKDM+YTHA+L ESMRLYPPVP D K+A +DDVLPDGTV+ KG RV YHPYAMGRSEKLWG+DWA FRPERWLEK D GKWSFV RD YTYPVFQAGPR+CLGKEMAFLQMKRVV+GVL FRVVP E+G+EP+ +++L +KM+GGFPVKI++R
Sbjct: 25 NSKSIFTSFCSSNKSAKSPRSYPLIGSFLSIYANRTRLIQWTSDIVTSTSTSTFVLHRPLGRRQVLTANPSNVQHILKTHFHIYQKGEFFRTHIFDLLGDGIFNVDGENWKFQRQVASHEFNTKSLRKFVETVVDTELSDRLIPIFSTAAANKTVFDLQDILQRFGFDNICKIAFGHDPAYLLPSLPQEKFALAFETAVQISSERFRAFHPLIWKTKRLLDIGSEKQLRISVNEVREFAREIVKEKKQELSEKSSLESVDLLSRFVSSGHSDENFVTDIVISFILAGRDTTSAALTWFFWLISRHPDVENEILKEINEK-----SEDASFEEVKDMVYTHASLSESMRLYPPVPIDSKEAIDDDVLPDGTVIKKGTRVAYHPYAMGRSEKLWGRDWAEFRPERWLEKRDEAAGKWSFVARDPYTYPVFQAGPRICLGKEMAFLQMKRVVSGVLRRFRVVPAFEEGEEPILIAHLASKMRGGFPVKIEER 508
BLAST of XM_017382146.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7GA50 ((Uncharacterized protein {ECO:0000313|EMBL:KAF5937457.1}))
HSP 1 Score: 689.493 bits (1778), Expect = 0.000e+0
Identity = 324/490 (66.12%), Postives = 400/490 (81.63%), Query Frame = 0
Match: A0A7J7GA50 ((Uncharacterized protein {ECO:0000313|EMBL:KAF5937457.1}))
HSP 1 Score: 689.493 bits (1778), Expect = 0.000e+0
Identity = 324/490 (66.12%), Postives = 400/490 (81.63%), Query Frame = 0
Query: 26 NFTSIYKGLF-PSKASKLPRSFPIFGSYFTILKNLHHFNNWSSEIVNSQPSNTVVFHRVLGQRQVVTSNPANVQHMLKTKFSVYQKGSFGAKILYDFLGHGIFNVDGESWKFQRQLASHEFNTKSLRKFVGTVVDTELTDRLVPILNQAVENQEVLEFQDILQRFAFDNICSIAFGYDPEYLLPSLPEAKFAVAFEKATLLTSKRFRKILPLVWKIQKVFNFGSEKELKECVEVVRDFAREVMREKKEELEQKSELQTVDLLSRFLASGHSDEVFVTDMVISFILAGRDTTSAALTWFFYLIARHPHVESQILAEINEKKFEKNSDTSVYDEVKDMIYTHAALCESMRLYPPVPTDGKQATEDDVLPDGTVVHKGDRVVYHPYAMGRSEKLWGKDWAVFRPERWLE-KDGVTGKWSFVGRDQYTYPVFQAGPRVCLGKEMAFLQMKRVVAGVLPEFRVVPMIEKGKEPVFVSYLTAKMQGGFPVKIQQRT 513
N SI+ LF P+K+SK+PRS+P+ GS+FT N + W+S++V + P++TVV + +G+ QV T+NP+NVQHMLK+ F +YQKG ++D LG GIFNVDGE+WKFQRQ+ASHEFNTKSLRKFV TVV+TEL+DRL+PI + A N+ VL+ QDILQRFAFDNIC IAFG+DP YL PSLP+ KFAVAFE A LL+S+R I P+ WKI++ + GSEK+L+ V VR+FA+E+++EKK+EL +KS L++VDLLSRFL+SGHSDE FVTD+VISFILAGRDTTSAALTWFF+LI+R+P VE++IL EIN+K S+ + ++EVKDM+Y HA+L ESMRLYPPVP DGKQA EDDVLPDGT+V KG RV+YHPYAMGRSEKLWG DWA FRPERWLE +D GKWSFV RD YTYPVFQAGPR+CLGKEMAFLQMKRVV+GVL FRVVP E+G P F+SYLT+KM+GGFPV+I++R
Sbjct: 24 NSKSIFTSLFSPNKSSKIPRSYPLIGSFFTFYANRNQLIQWTSDLVTNTPTSTVVLNSTVGRHQVFTANPSNVQHMLKSHFHIYQKGPIARVHVWDLLGDGIFNVDGENWKFQRQVASHEFNTKSLRKFVETVVETELSDRLIPIFSAAAANKTVLDLQDILQRFAFDNICKIAFGHDPAYLQPSLPQEKFAVAFETAVLLSSQRSNVIHPVYWKIKRFLDIGSEKQLRISVSEVREFAKELIKEKKQELGEKSSLESVDLLSRFLSSGHSDENFVTDIVISFILAGRDTTSAALTWFFWLISRYPDVENEILKEINDK-----SEAASFEEVKDMVYIHASLSESMRLYPPVPVDGKQAMEDDVLPDGTLVKKGTRVIYHPYAMGRSEKLWGSDWAEFRPERWLETRDAEAGKWSFVARDPYTYPVFQAGPRICLGKEMAFLQMKRVVSGVLRRFRVVPAFEEGVAPEFISYLTSKMKGGFPVRIEERA 508
| Match Name | Stats | Description |
|---|---|---|
| Q8W2N4 | E-Value: 0.000e+0, PID: 65.75 | (Cytochrome P450-dependent fatty acid hydroxylase ... [more] |
| A0A314L1D0 | E-Value: 0.000e+0, PID: 66.02 | (Cytochrome p450 94b1 {ECO:0000313|EMBL:OIT35420.1... [more] |
| A0A068U6D9 | E-Value: 0.000e+0, PID: 65.23 | (Uncharacterized protein {ECO:0000313|EMBL:CDP0371... [more] |
| A0A1S4B2K9 | E-Value: 0.000e+0, PID: 64.66 | (cytochrome P450 94A2-like {ECO:0000313|RefSeq:XP_... [more] |
| A0A6P6UXV8 | E-Value: 0.000e+0, PID: 65.04 | (cytochrome P450 94A1-like {ECO:0000313|RefSeq:XP_... [more] |
| A0A1S3XQ38 | E-Value: 0.000e+0, PID: 64.40 | (cytochrome P450 94A2-like {ECO:0000313|RefSeq:XP_... [more] |
| Q8W2N1 | E-Value: 0.000e+0, PID: 64.45 | (Cytochrome P450-dependent fatty acid hydroxylase ... [more] |
| A0A1U7VBH5 | E-Value: 0.000e+0, PID: 64.45 | (cytochrome P450 94A1-like isoform X1 {ECO:0000313... [more] |
| A0A7J7GDR4 | E-Value: 0.000e+0, PID: 65.85 | (Uncharacterized protein {ECO:0000313|EMBL:KAF5937... [more] |
| A0A7J7GA50 | E-Value: 0.000e+0, PID: 66.12 | (Uncharacterized protein {ECO:0000313|EMBL:KAF5937... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |