Resource Type:
Polypeptide
Name:
XM_017403566.1
Identifier:
XM_017403566.1-protein
Sequence:
MASTDFPLRWEGTGDQWWYASPIDWAAANGHYDLVRQLLRLDANHLIKLT
SLRRIHRLESVWDDDEHFDHVSRNRSEVAHKLFCECETNGSKNSLIEAGY
GGWLMYTAASAGDMDFVKKLLKIDPLMVFGEGEYGVTDVLYAAARSKNSE
IFRLLLDFALLPRLFIGNDKETEHIGEIPSAYRREMINRAIHAAARGGNL
VILKDLLECCSDILTYRDNEGSTILHAAAGRGQVEVVKDLITSSDIINSV
DNQGNTSLHVAAYRGQLAAVEVLMHASPPSMYSKNNAGETFLHRAVAGFQ
IPIFRRVDRQIELMKNLARGNNFVIEEIINAKNNDGRTALHLAVIGNIHT
DLVELLMTAHSINVNICDNDGMTALDLLKQRPRSASSEILTRQLISAGGI
FNCQDHSARKVIASHLRMRSIESSPGTSFEIPDSEILSQMVTDKGSNACG
SARLSPELAQPNKHVLISEKQSPKINIKSGSGTDASQRWRRFLHWPKMRK
RKSKPEPEPLEKTVDENSVTSSEEVPVSLRSKYSKPSSLPNHKRALSVRS
NAPSPTAKKKFASGLVHGVMQTMPHFNATRRTRSCSFSKSPATSSPYYWD
KQKGMYVENEIVAEASCSNSVLGDETPNVLHKPAFAHKRPLINQICFRGK
PQHREFYDPSIPSFT
Sequence Length:
665
Sequence Checksum:
2556dc428fdab8e89975702d0a0473dd
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017403566.1, derives from mRNA, XM_017403566.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017403566.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017403566.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7ACY6 (Ankyrin_rpt-contain_dom domain-containing protein {ECO:0000259|Pfam:PF12796})
HSP 1 Score: 838.565 bits (2165), Expect = 0.000e+0
Identity = 422/645 (65.43%), Postives = 509/645 (78.91%), Query Frame = 0
Match: A0A5B7ACY6 (Ankyrin_rpt-contain_dom domain-containing protein {ECO:0000259|Pfam:PF12796})
HSP 1 Score: 838.565 bits (2165), Expect = 0.000e+0
Identity = 422/645 (65.43%), Postives = 509/645 (78.91%), Query Frame = 0
Query: 6 FPLRWEGTGDQWWYASPIDWAAANGHYDLVRQLLRLDANHLIKLTSLRRIHRLESVWDDDEHFDHVSRNRSEVAHKLFCECETNGSKNSLIEAGYGGWLMYTAASAGDMDFVKKLLKIDPLMVFGEGEYGVTDVLYAAARSKNSEIFRLLLDFALLPRLFIGNDKE-TEHIGEIPSAYRREMINRAIHAAARGGNLVILKDLLECCSDILTYRDNEGSTILHAAAGRGQVEVVKDLITSSDIINSVDNQGNTSLHVAAYRGQLAAVEVLMHASPPSMYSKNNAGETFLHRAVAGFQIPIFRRVDRQIELMKNLARGNNFVIEEIINAKNNDGRTALHLAVIGNIHTDLVELLMTAHSINVNICDNDGMTALDLLKQRPRSASSEILTRQLISAGGIFNCQDHSARKVIASHLRMRSIESSPGTSFEIPDSEILSQMVTDKGSNACGSARLSPELAQPNKHVLISEKQSPKINIKSGSGTDASQRWRRFLHWPKMRKRKSKPEPEPLEKTVDENSVTSSEEVPVSLRSKYSKPSSLPNHKRALSVRSNAPSPTAKKKFASGLVHGVMQTMPHFNATRRTRSCSFSKSPATSSPYYWDKQKGMYVENEIVAEASCSNSVLGDETPNVLHKPAFAHKRPLINQICFRG 649
FPLRWE TGDQWWYASPIDWAAANGHYDLVR+LLRLD NHLIKLTSLRRI RLE+VWDDD+ F+ V++ RSEVA KL ECET KNSLI AGYGGW++YTAASAGD+ FV +LL+ DPL+VFGEGEYGVTD+LYAAARSKNSE+FRL+ DFA+ PR GN KE EHIG+IPSAY+ EM+NRA+HAAARGGNL ILK+LL CS++L YRD +GSTILHAAAGRGQVEVVKDL+ S ++I+S DN GNT+LHVAA RGQLA V L+ ASP S+Y KNN+GETFLH AV+GFQ P FRR+D QIELMK L G F IE+IINAKNNDGRTALH+A++GNIH+DLVELLM+ SI+VNI D++GMT LDLL+QRPRSASSEIL RQLI+AGGIF+CQD++AR+ IASHL+ RSI SSPGTSF I D+EI + S+A GS S EL Q + + E +P K+GS A++ +R LHWP+M++RK+ E L+KTVDE SV++ +E P+ LR ++SKPS+LPN+KR LSVRSN PSP AKKKFASG++HGVMQ MPH + R++RS SFSKS + SP DKQKG+++EN+I A SCSN + D TPN++HK K + CF G
Sbjct: 7 FPLRWESTGDQWWYASPIDWAAANGHYDLVRELLRLDGNHLIKLTSLRRIRRLETVWDDDKQFEDVAKCRSEVARKLLSECETKRGKNSLIRAGYGGWILYTAASAGDLGFVHELLERDPLLVFGEGEYGVTDILYAAARSKNSEVFRLVFDFAVSPRFLAGNGKEFEEHIGDIPSAYKGEMMNRAVHAAARGGNLKILKELLGDCSNVLAYRDIQGSTILHAAAGRGQVEVVKDLVASFNVIDSTDNHGNTALHVAASRGQLAVVAELILASPSSIYVKNNSGETFLHMAVSGFQTPSFRRLDPQIELMKQLVCGKMFNIEDIINAKNNDGRTALHVAIVGNIHSDLVELLMSVRSIDVNIRDSNGMTPLDLLRQRPRSASSEILIRQLITAGGIFSCQDYTARRAIASHLKKRSIGSSPGTSFGISDTEIFLYTGIENASDASGSVGHSAELGQHDSTI---ENHNPSNYKKAGSTNYAAKHLKRLLHWPRMKERKN----EGLKKTVDETSVSNLDEAPIPLRQRFSKPSALPNNKRTLSVRSNLPSPNAKKKFASGIMHGVMQAMPHLSVPRQSRSSSFSKS-SICSPTSLDKQKGIFIENDI-AGPSCSNQISDDRTPNLVHKQGSVSKNLMNQYFCFGG 642
BLAST of XM_017403566.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5AGJ8 (Ankyrin_rpt-contain_dom domain-containing protein {ECO:0000259|Pfam:PF12796})
HSP 1 Score: 830.091 bits (2143), Expect = 0.000e+0
Identity = 415/651 (63.75%), Postives = 507/651 (77.88%), Query Frame = 0
Match: A0A5J5AGJ8 (Ankyrin_rpt-contain_dom domain-containing protein {ECO:0000259|Pfam:PF12796})
HSP 1 Score: 830.091 bits (2143), Expect = 0.000e+0
Identity = 415/651 (63.75%), Postives = 507/651 (77.88%), Query Frame = 0
Query: 1 MASTDFPLRWEGTGDQWWYASPIDWAAANGHYDLVRQLLRLDANHLIKLTSLRRIHRLESVWDDDEHFDHVSRNRSEVAHKLFCECETNGSKNSLIEAGYGGWLMYTAASAGDMDFVKKLLKIDPLMVFGEGEYGVTDVLYAAARSKNSEIFRLLLDFALLPRLFIGNDKE-TEHIGEIPSAYRREMINRAIHAAARGGNLVILKDLLECCSDILTYRDNEGSTILHAAAGRGQVEVVKDLITSSDIINSVDNQGNTSLHVAAYRGQLAAVEVLMHASPPSMYSKNNAGETFLHRAVAGFQIPIFRRVDRQIELMKNLARGNNFVIEEIINAKNNDGRTALHLAVIGNIHTDLVELLMTAHSINVNICDNDGMTALDLLKQRPRSASSEILTRQLISAGGIFNCQDHSARKVIASHLRMRSIESSPGTSFEIPDSEILSQMVTDKGSNACGSARLSPELAQPNKHVLISEKQSPKINIKSGSGTDASQRWRRFLHWPKMRKRKSKPEPEPLEKTVDENSVTSSEEVPVSLRSKYSKPSSLPNHKRALSVRSNAPSPTAKKKFASGLVHGVMQTMPHFNATRRTRSCSFSKSPATSSPYYWDKQKGMYVENEIVAEASCSNSVLGDETPNVLHKPAFAHKRPLINQICFRGK 650
M + FPLRWE TGDQWWYASP+DWAAANGHYDLVR+L+RLD NHLIKLTSLRRI RLE+VWDD+E FD V++ RS+VA KL ECE SKNSLI+AGYGGWL+YTAASAGD+ FV++LL+ DPL+VFGEGEYGVTDVLYAAARSKNSE+FRL+ DFA+ PR GN +E EHIG+IPSAY+ EM+NRA+HAAARGGNL ILK+LL CS++LTYRD +GSTILHAAAGRGQVEVVKDL S ++I + DN GNT+LHVAAYRGQLA VE L+ ASP S++ KNNAGETFL AV+GFQ P FRR+DRQIE MK L G F IE+IINAKNN+GRTALH+A+ GNIH++LVELLM+ SI+VNICD +GMT LDLL+QRPRSASSEILTRQLISAGGIF+CQD +AR+ IASHL+ RSI SSPGTSF I D+EI + S+A GS S ++ ++ +E +P K+GS A++ +R HWP++++RK+ E LEK VDENS ++S+E P+ LR ++SKPSSLPN+KR LSVRSN PSPTAKKKFASGL+H V+Q MP+ A R S + SSP DKQKG+++EN+I A SCS+ + GD+TPN++ K K + +CF G+
Sbjct: 1 MPPSYFPLRWESTGDQWWYASPVDWAAANGHYDLVRELIRLDGNHLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSQVARKLLFECEIKRSKNSLIQAGYGGWLLYTAASAGDLGFVQELLERDPLLVFGEGEYGVTDVLYAAARSKNSELFRLVYDFAVSPRFLSGNGREFEEHIGDIPSAYKWEMLNRAVHAAARGGNLKILKELLGDCSNVLTYRDIQGSTILHAAAGRGQVEVVKDLAASFNVIEATDNHGNTALHVAAYRGQLAVVEALILASPSSIHVKNNAGETFLDMAVSGFQTPSFRRLDRQIEFMKQLVCGEVFNIEDIINAKNNEGRTALHVAIAGNIHSNLVELLMSVRSIDVNICDLNGMTPLDLLRQRPRSASSEILTRQLISAGGIFSCQDCTARRAIASHLKKRSIGSSPGTSFRISDTEIFLYTGIENASDASGSLGPSSYSSEQSQLDPSTENHNPSNYKKAGSTIYAAKHLKRLFHWPRIKQRKN----ERLEKQVDENSASNSDETPIPLRQRFSKPSSLPNNKRTLSVRSNLPSPTAKKKFASGLMHCVVQDMPNL-AVPRQSRSSSFSKLSISSPNSLDKQKGVFIENDI-AGPSCSSQISGDKTPNLIRKQGLIGKSLMNQYLCFGGR 645
BLAST of XM_017403566.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BZY4 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8548196.1}))
HSP 1 Score: 823.928 bits (2127), Expect = 0.000e+0
Identity = 421/631 (66.72%), Postives = 509/631 (80.67%), Query Frame = 0
Match: A0A5J5BZY4 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8548196.1}))
HSP 1 Score: 823.928 bits (2127), Expect = 0.000e+0
Identity = 421/631 (66.72%), Postives = 509/631 (80.67%), Query Frame = 0
Query: 6 FPLRWEGTGDQWWYASPIDWAAANGHYDLVRQLLRLDANHLIKLTSLRRIHRLESVWDDDEHFDHVSRNRSEVAHKLFCECETNGSKNSLIEAGYGGWLMYTAASAGDMDFVKKLLKIDPLMVFGEGEYGVTDVLYAAARSKNSEIFRLLLDFALLPRLFIGNDKE-TEHIGEIPSAYRREMINRAIHAAARGGNLVILKDLLECCSDILTYRDNEGSTILHAAAGRGQVEVVKDLITSSDIINSVDNQGNTSLHVAAYRGQLAAVEVLMHASPPSMYSKNNAGETFLHRAVAGFQIPIFRRVDRQIELMKNLARGNNFVIEEIINAKNNDGRTALHLAVIGNIHTDLVELLMTAHSINVNICDNDGMTALDLLKQRPRSASSEILTRQLISAGGIFNCQDHSARKVIASHLRMRSIESSPGTSFEIPDSEILSQMVTDKGSNACGS---ARLSPELAQPNKHVLISEKQSPKINIKSGSGTDASQRWRRFLHWPKMRKRKSKPEPEPLEKTVDENSVTSSEEVPVSLRSKYSKPSSLPNHKRALSVRSNAPSPTAKKKFASGLVHGVMQTMPHFNATRRTRSCSFSKSPATSSPYYWDKQKGMYVENEIVAEASCSNSVLGDETPNVLHK 632
FPLRWE TGDQWWYASPIDWAAANGHYDLVR+LLRLD NHLIKLTSLRRI RLE+VWDD+E FD VS+ RSEVA KL ECE+ KNSLI+AGYGGWL+YTAASAGD+ FV +LL+ DPL+VFGEGE+GVTD+LYAAARSKNSE+F+L+ DFA+ PR GN +E EHIG+IPSAY+ EM+NRA+HAAARGGNL ILK+LL CS++LTYRD +GSTILHAAAGRGQVEVVKDL+ S +II+S DN GNT+LH AAYRGQLA VE L+HASP S+Y KNN+GETFLH AV+GFQ PIFRR+DRQIELMK LA G F +E+IINAKNNDGRTALH+A++GNI ++LVELLM+ SI+VNI D +GMT LDLL++RPRSASSEIL+RQLI+AGGIF+CQD++AR+ IASHLR RSI SSPGTSF + D+EI + S+A GS + S EL+Q + + E Q+P I+ K+GS A++ +R LHWPKM++RK + +K V ENSV++S+E P+ LR ++SKPSSLPN+KR LSVRSN PSP AKKKFASG++HGVMQ MP R++RS SFSKS +S DKQKG++VEN+I A SCSN + D TPN +HK
Sbjct: 7 FPLRWESTGDQWWYASPIDWAAANGHYDLVRELLRLDGNHLIKLTSLRRIRRLETVWDDEEQFDDVSKCRSEVARKLLLECESKKGKNSLIQAGYGGWLLYTAASAGDLGFVHQLLERDPLLVFGEGEFGVTDILYAAARSKNSEVFKLVFDFAVSPRFLAGNGREFEEHIGDIPSAYKWEMMNRAVHAAARGGNLKILKELLGDCSNVLTYRDIQGSTILHAAAGRGQVEVVKDLVASFNIIDSTDNHGNTALHAAAYRGQLAVVEALIHASPSSIYVKNNSGETFLHMAVSGFQTPIFRRLDRQIELMKQLACGKMFNMEDIINAKNNDGRTALHVAIVGNIDSNLVELLMSVRSIDVNIRDLNGMTPLDLLRERPRSASSEILSRQLITAGGIFSCQDYTARRAIASHLRKRSIGSSPGTSFIVSDTEIFLHTGIENASDASGSIGQSSHSTELSQLDSTI---ENQNPSIHKKAGSVNYAAKHLKRLLHWPKMKERKKERL----KKLVVENSVSNSDETPIPLRQRFSKPSSLPNNKRTLSVRSNLPSPNAKKKFASGMMHGVMQAMPQLTVPRQSRSSSFSKSSISSPNSL-DKQKGVFVENDI-AGPSCSNQIPDDGTPNFIHK 628
BLAST of XM_017403566.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7ABT4 (Ankyrin_rpt-contain_dom domain-containing protein {ECO:0000259|Pfam:PF12796})
HSP 1 Score: 823.928 bits (2127), Expect = 0.000e+0
Identity = 423/651 (64.98%), Postives = 511/651 (78.49%), Query Frame = 0
Match: A0A5B7ABT4 (Ankyrin_rpt-contain_dom domain-containing protein {ECO:0000259|Pfam:PF12796})
HSP 1 Score: 823.928 bits (2127), Expect = 0.000e+0
Identity = 423/651 (64.98%), Postives = 511/651 (78.49%), Query Frame = 0
Query: 6 FPLRWEGTGDQWWYASPIDWAAANGHYDLVRQLLRLDANHLIKLTSLRRIHRLESVWDDDEHFDHVSRNRSEVAHKLFCECETNGSKNSLIEAGYGGWLMYTAASAGDMDFVKKLLKIDPLMVFGEGEYGVTDVLYAAARSKNSEIFRLLLDFALLPRLFIGNDKE-TEHIGEIPSAYRREMINRAIHAAARGGNLVILKDLLECCSDILTYRDNEGSTILHAAAGRGQVEVVKDLITSSDIINSVDNQGNTSLHVAAYRGQLAAVEVLMHASPPSMYSKNNAGETFLHRAVAGFQIPIFRRVDRQIELMKNLARGNNFVIEEIINAKNNDGRTALHLAVIGNIHTDLVELLMTAHSINVNICDNDGMTALDLLKQRPRSASSEILTRQLISAGGIFNCQDHSARKVIASHLRMRSIESSPGTSFEIPDSEILSQMVTDKGSNACGS---ARLSPELAQPNKHVLISEKQSPKINIKSGSGTDASQRWRRFLHWPKMRKRKSKPEPEPLEKTVDENSVTSSEEV-PVSLRSKYSKPSSLPNHKRALSVRSNAPSPTAKKKFASGLVHGVMQTMPHFNATRRTRSCSFSKSPATSSPYYWDKQKGMYVENEIVAEASCSNSVLGDETPNVLHKPAFAHKRPLINQICFRGKP 651
FPLRWE TGDQWWYASPIDWAAANGHYDLVR+LLRLD NHLIKLTSLRRI RLE+VWDDD+ F+ V++ RSEVA KL ECET KNSLI AGYGGW++YTAASAGD+ FV +LL+ DPL+VFGEGEYGVTD+LYAAARSKNSE+FRL+ DFA+ PR GN KE EHIG+IPSAY+ EM+NRA+HAAARGGNL ILK+LL CSD+L YRD +GSTILHAAAGRGQVEVVKDL+ S ++I S DN GNT+LHVAAYRGQLA VE L+ ASP S+Y KNN+GETFL AV+GFQ P FRR+DRQIELMK L G F IE+IIN KN++GRTALH+A++GNIH++LVELLM+ SI+VNI D +GMT LDLL+QRPRSASSEIL RQL+SAGGIF+ QDH+AR+ IASHLR RSI SSPGTSF + D+EI + S+A GS + S E+ Q + + E Q+P + K+GS A++R +R LHWP M++RK+ E L+K DEN V++S++ P+ LR ++SKPSSLP+HKR LSVRS+ PSPTAKKKFASGL+HGVMQ MP+ R++RS SFSK + SSP DKQKG+++EN+I A SCSN + GD+TPN + K K L+NQ G P
Sbjct: 7 FPLRWESTGDQWWYASPIDWAAANGHYDLVRELLRLDGNHLIKLTSLRRIRRLETVWDDDKQFEDVAKCRSEVARKLLSECETKRGKNSLIRAGYGGWILYTAASAGDLGFVHELLERDPLLVFGEGEYGVTDILYAAARSKNSEVFRLVFDFAVSPRFLAGNGKEFEEHIGDIPSAYKGEMMNRAVHAAARGGNLKILKELLGDCSDLLAYRDVQGSTILHAAAGRGQVEVVKDLVASFNVIESTDNHGNTALHVAAYRGQLAVVEALILASPSSIYVKNNSGETFLDTAVSGFQTPNFRRLDRQIELMKQLVCGKMFNIEDIINVKNDEGRTALHVAIVGNIHSNLVELLMSVPSIDVNIRDLNGMTPLDLLRQRPRSASSEILMRQLVSAGGIFSSQDHTARRAIASHLRKRSIGSSPGTSFRVSDTEIFLCTGIENASDASGSVGPSSYSSEMCQLDSSI---ENQNPSNHDKAGSVNYAAKRLKRLLHWPMMKQRKN----ERLKKLADENPVSNSDQTPPLPLRQRFSKPSSLPSHKRTLSVRSDLPSPTAKKKFASGLMHGVMQAMPNSTVPRQSRSSSFSKL-SISSPNSLDKQKGVFIENDI-AGPSCSNQISGDKTPNSIRKQGLISKS-LMNQYFCLGGP 647
BLAST of XM_017403566.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6L5BDJ6 ((Uncharacterized protein {ECO:0000313|EMBL:KAF1002772.1}))
HSP 1 Score: 809.675 bits (2090), Expect = 0.000e+0
Identity = 423/673 (62.85%), Postives = 505/673 (75.04%), Query Frame = 0
Match: A0A6L5BDJ6 ((Uncharacterized protein {ECO:0000313|EMBL:KAF1002772.1}))
HSP 1 Score: 809.675 bits (2090), Expect = 0.000e+0
Identity = 423/673 (62.85%), Postives = 505/673 (75.04%), Query Frame = 0
Query: 1 MASTDFPLRWEGTGDQWWYASPIDWAAANGHYDLVRQLLRLDANHLIKLTSLRRIHRLESVWDDDEHFDHVSRNRSEVAHKLFCECETNGSKNSLIEAGYGGWLMYTAASAGDMDFVKKLLKIDPLMVFGEGEYGVTDVLYAAARSKNSEIFRLLLDFALLPRLFIGNDKETEHIG-EIPSAYRREMINRAIHAAARGGNLVILKDLLECCSDILTYRDNEGSTILHAAAGRGQVEVVKDLITSSDIINSVDNQGNTSLHVAAYRGQLAAVEVLMHASPPSMYSKNNAGETFLHRAVAGFQIPIFRRVDRQIELMKNLARGNNFVIEEIINAKNNDGRTALHLAVIGNIHTDLVELLMTAHSINVNICDNDGMTALDLLKQRPRSASSEILTRQLISAGGIFNCQDHSARKVIASHLRMRSIESSPGTSFEIPDSEILSQM-VTDKG----SNACGSARLSPELAQPNKHVLISEKQSPKINIKSGSGTDASQRWRRFLHWPKMRKRKSKPEPEPLEKTVDENSVTSSEEVPVSLRSKYSKPSSLPNHKRALSVRSNAPSPTAKKKFASGLVHGVMQTMPHFNATRRTRSCSFSKSPATSSPYYWDKQKGMYVENEIVAEASCSNSVLGDETPNVLHKPAFAHKRPLINQICF--RGKPQHREFYDPSIPSFT 665
M STDFPLRWE TGD WWYASPIDWAAANGHYDLVR+LLR+D NHLI+L SLRRI RLE+VWDDDEHFD V+++RS+VA KL ECE+ K+SLI GYGGWL+YTAASAGD+ F+++LLK DPL+VFGEGEYGVTD+LYAAARSK+SE+FRLL+D AL R GN KE E G EIPS Y+REM+NRAIHAAARGGNL+ILK+LL C D L +RD +GSTILHAAAGRGQVEVVKDL+ S +II+ DNQGNT+LHVAAYRGQ AAVE L+ +P +MYS+NN GETFLH AV GFQ FRRVD QI LMK L N I+EIINAKNNDGRTALHLA+IGN+HTDLVELLM+ SI+VN+CDN+ MT LDLLKQRP SASSE+LT QLIS GG+F+CQD+SAR+V+ASHLRM S SPGTSF+IPDSE+ S M + D+G S SARLS + + K + E PK N K S D + R +R L WPKM+K+K PE L+KT+DE S++SSE +P+SLR +YS+ SSL N+KR +SVR+N SP KK+F GLV GVM PH R+ S SFSKS +S + DKQK + EN I AEASC ++ D PNV PA +K+ L+ +ICF G + E YD S PS +
Sbjct: 1 MPSTDFPLRWESTGDHWWYASPIDWAAANGHYDLVRELLRIDGNHLIQLASLRRIRRLETVWDDDEHFDDVAKHRSQVAQKLLLECESKRGKDSLIRGGYGGWLLYTAASAGDLSFIQELLKRDPLLVFGEGEYGVTDILYAAARSKSSEVFRLLIDSALSSRYSDGNRKEEEEDGKEIPSVYKREMMNRAIHAAARGGNLMILKELLGDCCDALAFRDVQGSTILHAAAGRGQVEVVKDLVASFNIIDCTDNQGNTALHVAAYRGQSAAVEALLLVAPSTMYSRNNNGETFLHMAVTGFQTSNFRRVDHQIVLMKQLVSENVSNIKEIINAKNNDGRTALHLAIIGNVHTDLVELLMSVGSIDVNVCDNNSMTPLDLLKQRPHSASSELLTTQLISVGGVFSCQDYSARRVMASHLRMISFGISPGTSFKIPDSELFSHMGIGDRGTRIKSVGIASARLSTDPEEMRKFDFVMENHIPKNNAKQSSVNDTALRLKRLLGWPKMKKKK----PEILQKTIDEISLSSSEGIPISLRQRYSQRSSLANNKRTISVRNNVQSPIPKKRFTFGLVQGVMHAKPHPKPKHRSCSSSFSKSSLSSHSSF-DKQKDIIGENNI-AEASCC-AITVDAGPNV---PARGNKK-LMKRICFGASGSQKQHEVYDQSFPSLS 662
BLAST of XM_017403566.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6VH05 ((serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A {ECO:0000313|RefSeq:XP_027101961.1, ECO:0000313|RefSeq:XP_027101962.1}))
HSP 1 Score: 799.66 bits (2064), Expect = 0.000e+0
Identity = 419/654 (64.07%), Postives = 501/654 (76.61%), Query Frame = 0
Match: A0A6P6VH05 ((serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A {ECO:0000313|RefSeq:XP_027101961.1, ECO:0000313|RefSeq:XP_027101962.1}))
HSP 1 Score: 799.66 bits (2064), Expect = 0.000e+0
Identity = 419/654 (64.07%), Postives = 501/654 (76.61%), Query Frame = 0
Query: 1 MASTDFPLRWEGTGDQWWYASPIDWAAANGHYDLVRQLLRLDANHLIKLTSLRRIHRLESVWDDDEHFDHVSRNRSEVAHKLFCECETNGSKNSLIEAGYGGWLMYTAASAGDMDFVKKLLKIDPLMVFGEGEYGVTDVLYAAARSKNSEIFRLLLDFALLPRLFIGNDKETEH-IGEIPSAYRREMINRAIHAAARGGNLVILKDLLECCSDILTYRDNEGSTILHAAAGRGQVEVVKDLITSSDIINSVDNQGNTSLHVAAYRGQLAAVEVLMHASPPSMYSKNNAGETFLHRAVAGFQIPIFRRVDRQIELMKNLARGNNFVIEEIINAKNNDGRTALHLAVIGNIHTDLVELLMTAHSINVNICDNDGMTALDLLKQRPRSASSEILTRQLISAGGIFNCQDHSARKVIASHLRMRSIESSPGTSFEIPDSEILSQMVTDKGSNACGSARLSPELAQPNKHVLISEKQSPKINIKSGSGTDASQRWRRFLHWPKMRKRKSKPEPEPLEKTVDENSVTSSEEVPVSLRSKYSKPSSLPNHKRALSVRSNAPSPTAKKKFASGLVHGVMQTMPHFNATRRTRSCSFSKSPATSSPYYWDKQKGMYVENEIVAEASCSNSVL-GDETPNVLHKPAFAHKRPLINQICFRGKPQ 652
M T PLRWE TGDQWWYASPIDWAAANGHYDLVR+LLRLD NHLI LTSLRRI RLE+VWDD++ FD V+R RS VA KL ECE+ KNSL+ AGYGGWL+YTA+SAGD+ FV++LL DPL+VFGEGEYGVTD+LYAAARSKNS++FR+L DFA+ PR N +E E I EIP+AY+ EM+NRAIHAAARGGNL +LK+LL CSD+L+YRD +G+TILHAAAGRGQVEVVKDLI S D+INSVDNQGNT+LHVAA RGQLA VE L+ A+P S+YSKNNAGETFLH AV GFQ P FRR+DRQIELMK L G F IEEIINAKNNDGRTALHLA+IGNIH+DLVELLMTA INVNI D +GMT LD+L+QRP S SS+IL +QLISAGGIF+CQD+S RK IASHLRMRSI SPGTSF D EI + S+A GS LSP + N H E S K + + A++R ++ LHWPKM+ +++ + +K+V E+S+ SE P+ LR ++S+PSSLPN+KR LSVRSN PSP+AKKK ASGLVHGVMQ +P N +RR+RS SFSKS + SS DKQKG+ +EN+I A ASCS + GD +P+ + K +K+ + +CF G Q
Sbjct: 1 MPPTYLPLRWESTGDQWWYASPIDWAAANGHYDLVRELLRLDGNHLITLTSLRRIRRLETVWDDEKQFDDVARCRSLVAKKLLVECESKKGKNSLVRAGYGGWLLYTASSAGDLGFVRELLDRDPLLVFGEGEYGVTDILYAAARSKNSDVFRVLFDFAVSPRFPSSNGRELEEPIAEIPAAYKFEMLNRAIHAAARGGNLTVLKELLGDCSDVLSYRDIQGATILHAAAGRGQVEVVKDLIASFDVINSVDNQGNTALHVAASRGQLAVVESLILATPSSIYSKNNAGETFLHVAVTGFQTPGFRRLDRQIELMKQLVCGRIFDIEEIINAKNNDGRTALHLAIIGNIHSDLVELLMTARFINVNIRDMEGMTPLDILRQRPHSVSSDILAKQLISAGGIFSCQDYSTRKAIASHLRMRSIGGSPGTSFRTSDMEIFLYTGIENISDAGGSVGLSPCSTETNHHDSSLETSSTTKRKKLHTVSYAARRLKQLLHWPKMKDKRA----DRCKKSVGEHSICPSEGPPIPLRQRFSRPSSLPNNKRTLSVRSNLPSPSAKKKLASGLVHGVMQGIPSVNVSRRSRSSSFSKS-SFSSHSSLDKQKGIQIENDI-AGASCSRQIGDGDGSPSAVPKLGPINKKLMNQLLCFGGPGQ 648
BLAST of XM_017403566.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6P9L3 ((Ankyrin repeat-containing protein {ECO:0000313|EMBL:PSR87507.1}))
HSP 1 Score: 798.119 bits (2060), Expect = 0.000e+0
Identity = 413/658 (62.77%), Postives = 502/658 (76.29%), Query Frame = 0
Match: A0A2R6P9L3 ((Ankyrin repeat-containing protein {ECO:0000313|EMBL:PSR87507.1}))
HSP 1 Score: 798.119 bits (2060), Expect = 0.000e+0
Identity = 413/658 (62.77%), Postives = 502/658 (76.29%), Query Frame = 0
Query: 1 MASTDFPLRWEGTGDQWWYASPIDWAAANGHYDLVRQLLRLDANHLIKLTSLRRIHRLESVWDDDEHFDHVSRNRSEVAHKLFCECETNGSKNSLIEAGYGGWLMYTAASAGDMDFVKKLLKIDPLMVFGEGEYGVTDVLYAAARSKNSEIFRLLLDFALLPRLFIGNDKETE-HIGEIPSAYRREMINRAIHAAARGGNLVILKDLLECCSDILTYRDNEGSTILHAAAGRGQVEVVKDLITSSDIINSVDNQGNTSLHVAAYRGQLAAVEVLMHASPPSMYSKNNAGETFLHRAVAGFQIPIFRRVDRQIELMKNLARGNNFVIEEIINAKNNDGRTALHLAVIGNIHTDLVELLMTAHSINVNICDNDGMTALDLLKQRPRSASSEILTRQLISAGGIFNCQDHSARKVIASHLRMRSIESSPGTSFEIPDSEILSQMVTDKGSNACGSA--RLSPELAQPNKHVLI------SEKQSPKINIKSGSGTDASQRWRRFLHWPKMRKRKSKPEPEPLEKTVDENSVTSSEEVPVSLRSKYSKPSSLPNHKRALSVRSNAPSPTAKKKFASGLVHGVMQTMPHFNATRRTRSCSFSKSPATSSPYYWDKQKGMYVENEIVAEASCSNSVLGDETPNVLHKPAFAHKRPLINQICFRG 649
M + FPLRWE TGDQWWYASPIDWAAANGHYDLVR+LLRLD N+LIKLTSLRRI RLE+VWDD+E FD V++ RS+VA KLF ECET KNSLI AGYGGWL+YTAASAGD+ FV++LL+ DPL+VFGEGEYGVTD+LYAAARS+NSE+FRL+ DFA PR G +E E HIGEIP+AY+ EM+NRA+HAAARGGNL +LK+LL CSD+L +RD +GSTILHAAAGRGQ EVVK LI S DIINS DN GNT+LHVAA+RGQLA VE L+ SP S+Y N AGETFLH ++GFQ P F R+DRQIELMK L G F E +INAKNNDGRTALH+A+IGN+H+DLVE LM+A SINVNICD++GMT LDL++QRPRSASS+ILTRQLISAGGIF+ QD++AR+ IASHLRMRSI SPGTSF I D+EI D +A G A LS E+ Q + + + K++P +N+ A+QR +R HWPKM++RK+ E L+K D+NS ++ +E P+ LR ++SKPSSLPN+KR LSVRSN PSPTAKK+FASGLV GV+Q MPH + RR+RS SFSKS +SS DKQK + +E++I A S SN + + PN+ HK +K + +CF G
Sbjct: 1 MPPSYFPLRWESTGDQWWYASPIDWAAANGHYDLVRELLRLDGNNLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSQVARKLFSECETKKEKNSLIRAGYGGWLLYTAASAGDLSFVQELLEKDPLLVFGEGEYGVTDILYAAARSRNSEVFRLVYDFAASPRFLAGEGREVEEHIGEIPAAYKWEMMNRAVHAAARGGNLKVLKELLGDCSDVLAFRDMQGSTILHAAAGRGQAEVVKYLIASFDIINSTDNHGNTALHVAAHRGQLAVVEALILGSPSSIYLPNTAGETFLHMVMSGFQTPSFHRLDRQIELMKQLVCGKLFNAEGVINAKNNDGRTALHVAIIGNVHSDLVEQLMSARSINVNICDSNGMTPLDLIRQRPRSASSDILTRQLISAGGIFSSQDYTARRTIASHLRMRSI-GSPGTSFRISDAEIFLHTGIDIALDASGIAGPSLSTEVCQHDSTMETHNESNSAHKKTPSVNL-------AAQRLKRLFHWPKMKERKT----ERLKKMGDKNSASNLDETPIPLRQRFSKPSSLPNNKRTLSVRSNLPSPTAKKRFASGLVQGVIQAMPHLSVPRRSRSSSFSKSSVSSSSTSLDKQKSVCIESDI-AGPSSSNQLSDEGIPNLSHKQRSVNKSLVSQYLCFGG 645
BLAST of XM_017403566.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A068V7L9 (Ankyrin_rpt-contain_dom domain-containing protein {ECO:0000259|Pfam:PF12796})
HSP 1 Score: 796.964 bits (2057), Expect = 0.000e+0
Identity = 419/654 (64.07%), Postives = 499/654 (76.30%), Query Frame = 0
Match: A0A068V7L9 (Ankyrin_rpt-contain_dom domain-containing protein {ECO:0000259|Pfam:PF12796})
HSP 1 Score: 796.964 bits (2057), Expect = 0.000e+0
Identity = 419/654 (64.07%), Postives = 499/654 (76.30%), Query Frame = 0
Query: 1 MASTDFPLRWEGTGDQWWYASPIDWAAANGHYDLVRQLLRLDANHLIKLTSLRRIHRLESVWDDDEHFDHVSRNRSEVAHKLFCECETNGSKNSLIEAGYGGWLMYTAASAGDMDFVKKLLKIDPLMVFGEGEYGVTDVLYAAARSKNSEIFRLLLDFALLPRLFIGNDKETEH-IGEIPSAYRREMINRAIHAAARGGNLVILKDLLECCSDILTYRDNEGSTILHAAAGRGQVEVVKDLITSSDIINSVDNQGNTSLHVAAYRGQLAAVEVLMHASPPSMYSKNNAGETFLHRAVAGFQIPIFRRVDRQIELMKNLARGNNFVIEEIINAKNNDGRTALHLAVIGNIHTDLVELLMTAHSINVNICDNDGMTALDLLKQRPRSASSEILTRQLISAGGIFNCQDHSARKVIASHLRMRSIESSPGTSFEIPDSEILSQMVTDKGSNACGSARLSPELAQPNKHVLISEKQSPKINIKSGSGTDASQRWRRFLHWPKMRKRKSKPEPEPLEKTVDENSVTSSEEVPVSLRSKYSKPSSLPNHKRALSVRSNAPSPTAKKKFASGLVHGVMQTMPHFNATRRTRSCSFSKSPATSSPYYWDKQKGMYVENEIVAEASCSNSVL-GDETPNVLHKPAFAHKRPLINQICFRGKPQ 652
M T PLRWE TGDQWWYASPIDWAAANGHYDLVR+LLRLD NHLI LTSLRRI RLE+VWDD++ FD V+R RS VA KL ECE KNSL+ AGYGGWL+YTA+SAGD+ FV++LL DPL+VFGEGEYGVTD+LYAAARSKNS++FR+L DFA+ PR N +E E I EIP+AY+ EM+NRAIHAAARGGNL +LK+LL CSD+L+YRD +G+TILHAAAGRGQVEVVKDLI S D+INSVDNQGNT+LHVAA RGQLA VE L+ ASP S+YSKNNAGETFLH AV GFQ P FRR+DRQIELMK L G F IEEIINAKNNDGRTALHLA+IGNIH+DLVELLMTA INVNI D +GMT LD+L+QRP S SS+IL +QLISAGGIF+CQD+S RK IASHLRMRSI SPGTSF D EI + S+A GS LSP + N H E S K + + A++R ++ LHWPKM+ +++ + +K+V E+S+ SE P+ LR ++S+PSSLPN+KR LSVRSN PSP+AKKK ASGLVHGVMQ +P N +RR+RS SFSKS +S DKQKG+ +EN+I A ASCS + GD +P+ + K +K+ + +CF G Q
Sbjct: 1 MPPTYLPLRWESTGDQWWYASPIDWAAANGHYDLVRELLRLDGNHLITLTSLRRIRRLETVWDDEKQFDDVARCRSLVAKKLLVECENKKGKNSLVRAGYGGWLLYTASSAGDLGFVRELLDRDPLLVFGEGEYGVTDILYAAARSKNSDVFRILFDFAVSPRFPSSNGRELEEPIAEIPAAYKFEMLNRAIHAAARGGNLTVLKELLGDCSDVLSYRDIQGATILHAAAGRGQVEVVKDLIASFDVINSVDNQGNTALHVAASRGQLAVVESLILASPSSIYSKNNAGETFLHVAVTGFQTPGFRRLDRQIELMKQLVCGRIFDIEEIINAKNNDGRTALHLAIIGNIHSDLVELLMTARFINVNIRDMEGMTPLDILRQRPHSVSSDILAKQLISAGGIFSCQDYSTRKAIASHLRMRSIGGSPGTSFRTSDMEIFLYTGIENVSDAGGSVGLSPCSTETNHHDSSLETSSTTKRKKLHTVSYAARRLKQLLHWPKMKDKRA----DRCKKSVGEHSICPSEGPPIPLRQRFSRPSSLPNNKRTLSVRSNLPSPSAKKKLASGLVHGVMQGIPSVNVSRRSRSSSFSKSSFSSHSSL-DKQKGIQIENDI-AGASCSRLIGDGDGSPSAVPKLGPINKKLMNQLLCFGGPGQ 648
BLAST of XM_017403566.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RJF6 ((Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A like {ECO:0000313|EMBL:PSS30162.1}))
HSP 1 Score: 789.645 bits (2038), Expect = 0.000e+0
Identity = 410/658 (62.31%), Postives = 503/658 (76.44%), Query Frame = 0
Match: A0A2R6RJF6 ((Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A like {ECO:0000313|EMBL:PSS30162.1}))
HSP 1 Score: 789.645 bits (2038), Expect = 0.000e+0
Identity = 410/658 (62.31%), Postives = 503/658 (76.44%), Query Frame = 0
Query: 1 MASTDFPLRWEGTGDQWWYASPIDWAAANGHYDLVRQLLRLDANHLIKLTSLRRIHRLESVWDDDEHFDHVSRNRSEVAHKLFCECETNGSKNSLIEAGYGGWLMYTAASAGDMDFVKKLLKIDPLMVFGEGEYGVTDVLYAAARSKNSEIFRLLLDFALLPRLFIGNDKETE-HIGEIPSAYRREMINRAIHAAARGGNLVILKDLLECCSDILTYRDNEGSTILHAAAGRGQVEVVKDLITSSDIINSVDNQGNTSLHVAAYRGQLAAVEVLMHASPPSMYSKNNAGETFLHRAVAGFQIPIFRRVDRQIELMKNLARGNNFVIEEIINAKNNDGRTALHLAVIGNIHTDLVELLMTAHSINVNICDNDGMTALDLLKQRPRSASSEILTRQLISAGGIFNCQDHSARKVIASHLRMRSIESSPGTSFEIPDSEILSQMVTDKGSNACGSAR--LSPELAQ--PNKHV----LISEKQSPKINIKSGSGTDASQRWRRFLHWPKMRKRKSKPEPEPLEKTVDENSVTSSEEVPVSLRSKYSKPSSLPNHKRALSVRSNAPSPTAKKKFASGLVHGVMQTMPHFNATRRTRSCSFSKSPATSSPYYWDKQKGMYVENEIVAEASCSNSVLGDETPNVLHKPAFAHKRPLINQICFRG 649
M + PLRWE TGDQWWYASPIDWAAANGHYDLVR+LL LD N+LI LTSLRRI RLE+VWDD+E FD V++ RS+VA KLF ECET KNSLI AGYGGWL+YTAASAGD+ FV++LL+ DPL+VFGE EYGVTD+LYAAARS+NSE+FRL+ DFA+ PR G +E E HIGEIP+AY+ EM+NRA+HAAARGGNL+ LK+LL CSD+L +RD +GSTILHAAAGRGQ +VVK LI S DIINS DN GNT+LHVAA+RGQLA VE L+ SP S+Y +N AGETFLH ++GFQ P F R+DRQIELMK L G F E +INAKNNDGRTALH+AVIGN+H+DLVE LM+A SINVNI D++GMT LDL+KQRPRSASS+ILTRQLISAGGIF+ QD++AR+ IASHLRMRSI SPGTSF I D+EI D +A G AR LS E++Q P + K++P +N+ A+Q+ +R HWPKM++RK+ E L+K ++NS +S +E P+ LR ++SKPSSLPN+KR LSVRSN PSPTAKK+FASGLV GV+Q MPH + RR+RS SFSKS +SS DKQK +++E++I A S SN + + TPN+++K +K + +CF G
Sbjct: 1 MPPSYLPLRWESTGDQWWYASPIDWAAANGHYDLVRELLHLDGNNLINLTSLRRIRRLETVWDDEEQFDDVAKCRSQVARKLFSECETKKEKNSLIRAGYGGWLLYTAASAGDLSFVQELLEKDPLLVFGEVEYGVTDILYAAARSRNSEVFRLVYDFAVSPRFLAGEGREVEEHIGEIPAAYKWEMMNRAVHAAARGGNLMALKELLGDCSDVLAFRDMQGSTILHAAAGRGQAKVVKYLIASFDIINSTDNHGNTALHVAAHRGQLAVVEALILGSPSSIYLRNAAGETFLHMVMSGFQTPSFHRLDRQIELMKQLVCGKLFAAEGVINAKNNDGRTALHVAVIGNVHSDLVEQLMSARSINVNIRDSNGMTPLDLIKQRPRSASSDILTRQLISAGGIFSSQDYTARRTIASHLRMRSI-GSPGTSFRISDTEIFLHTGIDIALDASGMARPSLSTEVSQHFPTMETHDASKSAHKKTPSVNL-------AAQQLKRLFHWPKMKERKT----ERLKKMGNKNSASSLDETPIPLRQRFSKPSSLPNNKRTLSVRSNLPSPTAKKRFASGLVQGVIQAMPHLSVPRRSRSSSFSKSSVSSSSISLDKQKSVWIESDI-AGPSSSNQISDEGTPNLINKQRSVNKSLMNQYLCFGG 645
BLAST of XM_017403566.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: M1B1K1 ((Ankyrin {ECO:0000313|EnsemblPlants:PGSC0003DMT400034944}))
HSP 1 Score: 789.645 bits (2038), Expect = 0.000e+0
Identity = 407/656 (62.04%), Postives = 497/656 (75.76%), Query Frame = 0
Match: M1B1K1 ((Ankyrin {ECO:0000313|EnsemblPlants:PGSC0003DMT400034944}))
HSP 1 Score: 789.645 bits (2038), Expect = 0.000e+0
Identity = 407/656 (62.04%), Postives = 497/656 (75.76%), Query Frame = 0
Query: 1 MASTDFPLRWEGTGDQWWYASPIDWAAANGHYDLVRQLLRLDANHLIKLTSLRRIHRLESVWDDDEHFDHVSRNRSEVAHKLFCECETNGSKNSLIEAGYGGWLMYTAASAGDMDFVKKLLKIDPLMVFGEGEYGVTDVLYAAARSKNSEIFRLLLDFALLPRLF-IGNDKETEHIGEIPSAYRREMINRAIHAAARGGNLVILKDLL-ECCSDILTYRDNEGSTILHAAAGRGQVEVVKDLITSSDIINSVDNQGNTSLHVAAYRGQLAAVEVLMHASPPSMYSKNNAGETFLHRAVAGFQIPIFRRVDRQIELMKNLARGNNFVIEEIINAKNNDGRTALHLAVIGNIHTDLVELLMTAHSINVNICDNDGMTALDLLKQRPRSASSEILTRQLISAGGIFNCQDHSARKVIASHLRMRSIESSPGTSFEIPDSEILSQMVTDKGSNACGSARLSPELAQPNKHVLISEKQSPKINIKSGSGTDASQRWRRFLHWPKMRKRKSKPEPEPLEKTVDENSVTSSEEVPVSLRSKYSKPSSLPNHKRALSVRSNAPSPTAKKKFASGLVHGVMQTMPHFNATRRTRSCSFSKSPATSSPYYWDKQKGMYVENEIVAEASCSNSVLGDETPNVLHKPAFAHKRPLINQ-ICF--RGKP 651
M T PLRWE TGDQWWYASPIDWAAANGHYDLVR+LLRLD NHLIKLTSLRRI RLESVWDD+E FD V+R R +VA KL ECET KNSL+ AGYGGWL+YTAASAGD+DFV++LL+ D L+VFGEGEYGVTD+LYAAARSKN ++F++L DFA+ PR G E IGEIPSAY+ EM+NRAIHAAARGGNL+ILK+LL +C DIL YRD +G+T+LH AAG+GQVEVVK L+ SSDII+S+DNQGNT+LHVAA RGQLA VE L+ ASP +++KNNAGETFLH A++GFQ P FRR+D QI+LMK L G N +EEI+NA+NNDGRTALHLAVIGNIH++LVELLMT INVN D DGMT LD+LKQRPRSASSE+LT+QLISAGGIF+ D+SAR+V+ASHL+M++I SSPGTSF I D+EI + S+ +A LS P+ + + K K S DA+Q+ + F HWPK++KR SK L+ VD++S ++S+ PV+LR +YSKPSSLPNHKR LS SN PSPTAKKKFASGLV+GVMQ +PH + RR+ S + SS DKQK + ++ E+ A SCS+ G + ++ HKP+ HKR L+NQ +CF G+P
Sbjct: 1 MPPTYLPLRWESTGDQWWYASPIDWAAANGHYDLVRELLRLDGNHLIKLTSLRRIRRLESVWDDEEQFDDVARCRLQVARKLHLECETKKGKNSLLTAGYGGWLLYTAASAGDLDFVRELLEKDSLLVFGEGEYGVTDILYAAARSKNCDVFKVLFDFAMSPRFIACGGRGLEEQIGEIPSAYKWEMMNRAIHAAARGGNLMILKELLVDCSDDILAYRDIQGATLLHTAAGKGQVEVVKYLLKSSDIIDSIDNQGNTALHVAACRGQLAVVEALIVASPLLIHTKNNAGETFLHVAISGFQTPYFRRLDHQIDLMKQLVCGKNSNVEEIVNAENNDGRTALHLAVIGNIHSELVELLMTVRYINVNTRDKDGMTPLDILKQRPRSASSELLTKQLISAGGIFSHLDYSARRVVASHLKMQNINSSPGTSFRISDTEIFLYTGIEHASDGSRNAELSHPCTSPDTYCSTNGK-------KPVSANDAAQKLKGFFHWPKIKKRDSK----RLKILVDQSSASNSDVAPVTLRERYSKPSSLPNHKRTLSASSNLPSPTAKKKFASGLVNGVMQAIPHLSLPRRSSRASSFSISSLSSRSSMDKQKAIVIDTEL-AGTSCSHQTEGAPSDSI-HKPSAGHKR-LVNQYLCFGASGRP 642
| Match Name | Stats | Description |
|---|---|---|
| A0A5B7ACY6 | E-Value: 0.000e+0, PID: 65.43 | Ankyrin_rpt-contain_dom domain-containing protein ... [more] |
| A0A5J5AGJ8 | E-Value: 0.000e+0, PID: 63.75 | Ankyrin_rpt-contain_dom domain-containing protein ... [more] |
| A0A5J5BZY4 | E-Value: 0.000e+0, PID: 66.72 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8548... [more] |
| A0A5B7ABT4 | E-Value: 0.000e+0, PID: 64.98 | Ankyrin_rpt-contain_dom domain-containing protein ... [more] |
| A0A6L5BDJ6 | E-Value: 0.000e+0, PID: 62.85 | (Uncharacterized protein {ECO:0000313|EMBL:KAF1002... [more] |
| A0A6P6VH05 | E-Value: 0.000e+0, PID: 64.07 | (serine/threonine-protein phosphatase 6 regulatory... [more] |
| A0A2R6P9L3 | E-Value: 0.000e+0, PID: 62.77 | (Ankyrin repeat-containing protein {ECO:0000313|EM... [more] |
| A0A068V7L9 | E-Value: 0.000e+0, PID: 64.07 | Ankyrin_rpt-contain_dom domain-containing protein ... [more] |
| A0A2R6RJF6 | E-Value: 0.000e+0, PID: 62.31 | (Serine/threonine-protein phosphatase 6 regulatory... [more] |
| M1B1K1 | E-Value: 0.000e+0, PID: 62.04 | (Ankyrin {ECO:0000313|EnsemblPlants:PGSC0003DMT400... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |