XM_017402436.1

Resource Type: 
Polypeptide
Name: 
XM_017402436.1
Identifier: 
XM_017402436.1-protein
Sequence: 
MATIEFQEKKRWGDLSKVYTRKKHNKRFKNCDTGAVEPATSSATPVNEAV
STETITDITNNQEKVGVEKGGDSVQERPLELDLAEKDGNSTSQVEEVPKN
LSPLNGVSDGLSNENQPQEGDNSTNKLQEVPNGNAVINPVVVRVDDRVRI
NFAATNSRDEIWELRRKLLNELDQVRSMSKQLQAKEVELSGVCSNTAAAP
VGAAAYSLSQHSENNERREVVKVNSEVVSVRNLKLKPFRAVSNSVMENNG
FASVRENDNLVDGSQLMRVNSELDSVVTVQEYRPFRQLNVSVPENINNSH
AFRHLNVSVPQNNNHSHGFSEYIEKEKRTPKANQYYRNSDFLLAKDRLPP
ETNKKVKSNGRRKHGQLDYASSIDRFWNQAFKSCRELLQRLMKHKHGWVF
NEPVNARALGLHDYHDIIKHPMDLGTIKSKLAHYLYKSPREFADDVRLTF
RNAKTYNPMGHDVHIMADQLSTIFEDRWAVIEAKYNPELIFDMNHYGGLP
TPMSRKVVPTPPSSQPIFPERDLDRSEYMPEPVEFRPKPFVVPSVKTPVP
KKPKAKDLNKRDMTFDEKRKLSVNLESLPVEKLESVVQIIKKRNSVLKQQ
DDEIELDIDSFDAETLWELDRFVTNYKKSLSKYRRRAELAQARAEAQKSI
HAPNLDPAFTVAAEESKAGDTRVATKSLVQAEKQGGDVSSSSSSSTSDSD
SSSSDSDSDSSSAQGSDGD
Sequence Length: 
719
Sequence Checksum: 
ccd043276bd217c741948461ff74c562
View location in JBrowse: 
DCARv2_Chr6:26599611..26602090-
Organism: 
Daucus carota subspecies sativus
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017402436.1, derives from mRNA, XM_017402436.1.
Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017402436.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
[Close]
BLAST of XM_017402436.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5ABF0 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8526777.1}))

HSP 1 Score: 568.54 bits (1464), Expect = 0.000e+0
Identity = 345/689 (50.07%), Postives = 431/689 (62.55%), Query Frame = 0
 
Query:    1 MATIEFQEKKRWGDLSKVYTRKKHNKRFKNCDTGAVEPATSSATPVNEAVSTETITDITNNQEKVGVEKGGDSVQERPLELDLAEKDGNSTSQVEEVPKNLSPLNGVSDGLSNENQPQEGDNSTNKLQEVPNGNAVINPVVVRVDDRVRINFAATNSRDEIWELRRKLLNELDQVRSMSKQLQAKEVELSGVCSNTAAAPVGAAAYSLSQHSENNERREVVKVNSEVVSVRNLKLKPFRAVSNSVMENNGFASVRENDNLVDGSQLMRVNSELDSVVTVQEYRPFRQLNVSVPENINNSHAFRHLNVSVPQNNNHSHGFSEYIEKEKRTPKANQYYRNSDFLLAKDRLPP-ETNKKVKSNGRRKH-GQLDYASSIDRFWNQAFKSCRELLQRLMKHKHGWVFNEPVNARALGLHDYHDIIKHPMDLGTIKSKLAHYLYKSPREFADDVRLTFRNAKTYNPMGHDVHIMADQLSTIFEDRWAVIEAKYNPELIFDMNHYGGLPTPMSRKVVPTPPSSQPIFPERDLDRSEYMPEPVEFRPKPF-VVPSVKTPVPKKPKAKDLNKRDMTFDEKRKLSVNLESLPVEKLESVVQIIKKRNSVLKQQDDEIELDIDSFDAETLWELDRFVTNYKKSLSKYRRRAELA-QARAEAQKSIHAPNLDPAFTVAAEESKAGDTRVATKSLVQAEKQG 685
            +   + +EK RWGD +KVYTRK HNK  KN +T       S+    N  +ST T  +  +N               +P    LA ++ NS+ Q +     LS L+  SD  S+ N P +   ST   +E PNGN  I P + +VD+RVRIN AA  S+++I ELRRKL+ ELDQVRS++K+L+AKE+ L+   S  AAA  GA AY+ SQ S                              N V+   G               L+RVNSE+ SV  +                  +S +F+HL+VSV +NN   HG  E++EKEKRTPKANQYYRNSDFLL K+RLPP E+NKK+K+N  +KH G++ Y   +D++ +QA KSC  LL +LMKHKHGWVFN PV+A+AL LHDYHDIIKHPMDLGT+KS+LA   YKSPREFA+DVRLTFRNA  YNP G DVHIMA+ L  IFE+RWAVIEA+YNP+  ++M    GL TP SRK  P P   +P    R LDRSE M   V+ + K     P  + PV KKPKAKD +KRDMTF+EK++LS NL+ LP EKL+++VQIIK  NS L Q DDEIE+DIDS DAETLWELDRFVTNYKKSLSK +R+AELA QARAEA  S+ A N  PA   + +E+K  +  VAT S VQ EKQG
Sbjct:    6 LGADDLREKHRWGDGNKVYTRKIHNKGLKNKNTSNNNATASTTANNNNIISTTTTDNNNDNNNNF----------PQPCSQTLATEEANSSQQQQ----TLSRLDAASDDSSSHNPPPQV--STPNGREPPNGNGAIKPFITKVDNRVRINLAAARSKNDILELRRKLVTELDQVRSLAKKLEAKELLLTEY-SAAAAAGAGADAYNHSQFS-----------------------------GNGVINRGG---------------LVRVNSEVGSVGHL------------------DSRSFQHLSVSVMENN---HGVGEFVEKEKRTPKANQYYRNSDFLLGKERLPPPESNKKLKTNRGKKHSGEMGYGFVMDKYTSQALKSCSNLLAKLMKHKHGWVFNTPVDAKALDLHDYHDIIKHPMDLGTVKSRLAKNWYKSPREFAEDVRLTFRNAMAYNPKGQDVHIMAELLLNIFEERWAVIEAEYNPDWRYEMVRDAGLLTPTSRKTHPFP---RPPPEMRSLDRSESMTMTVDSKLKQSNFAPVGRAPVLKKPKAKDPHKRDMTFEEKQRLSTNLQCLPSEKLDNIVQIIKNSNSALCQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELALQARAEATNSVPAINPAPAIVKSPKETKTDEKNVATSSPVQDEKQG 609
[Close]
BLAST of XM_017402436.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2J6MF73 ((Uncharacterized protein {ECO:0000313|EMBL:PLY98252.1}))

HSP 1 Score: 560.066 bits (1442), Expect = 0.000e+0
Identity = 325/640 (50.78%), Postives = 397/640 (62.03%), Query Frame = 0
 
Query:    9 KKRWGDLSKVYTRKKHNKRFKNCDTGAVEPATSSATPVNEAVSTETITDITNNQEKVGVEKGGDSVQERPLELDLAEKDGNSTSQVEEVPKNLSPLNGVSDGLSNENQPQEGDNSTNKLQEVPNGNAVINPVVVRVDDRVRINFAATNSRDEIWELRRKLLNELDQVRSMSKQLQAKEVELSGVCSNTAAAPVGAAAYSLSQHSENN--ERREVVKVNSEVVSVRNLKLKPFRAVSNSVMENNGFASVRENDNLVDGSQLMRVNSELDSVVTVQEYRPFRQLNVSVPENINNSHAFRHLNVSVPQNNNHSHGFSEYIEKEKRTPKANQYYRNSDFLLAKDRLPPETNKKVKSNGRRKHG-QLDYASSIDRFWNQAFKSCRELLQRLMKHKHGWVFNEPVNARALGLHDYHDIIKHPMDLGTIKSKLAHYLYKSPREFADDVRLTFRNAKTYNPMGHDVHIMADQLSTIFEDRWAVIEAKYNPE----LIFDMNHYGGLPTPMSRKVVPTPPSSQPIFPERDLDRSEYMPEPVEFRPKPFVVPSVKTPVPKKPKAKDLNKRDMTFDEKRKLSVNLESLPVEKLESVVQIIKKRNSVLKQQDDEIELDIDSFDAETLWELDRFVTNYKKSLSKYRRRAELAQ 641
            K +WG+ +KVYTR     RFK         A SS T  +   +T   T  TN           ++ Q      +LA +D NS  Q       LSP+  VSD  S      +   S N+    P GN VI PVVV V DRVRIN  A  +++EI ELR KL  EL+QVR +S++L+ KE EL+   S   A P    AYS SQ+S N+  ERR +++VNSE+ +                             + VD   LMR+NS++ S     + RPFRQLNVSV +N                    +HG  E++EKEKRTPKANQYYRNSDFLL KDRLPPETNK+ K+NG RKH  + DY+S  +R  NQ FK+C  LLQRLMKHKHGWVFNEPVNA+ LGLHDYHDIIKHPMD GTIKS+LA   YKSP EFA+DVRLTF NA TYNP G DVH+MA+QLS IFE+RW+VIE++ NP+    +I+D N         + +  P    +    P R L RSE M  P   RPKP + P  +TP PKKPKAKD NKR+MT++EK+KLS NL+SLP EKL+++VQIIKK+N+ L Q DDEIE+DIDS D ETLWELDRFVTNYKKSLSK+RRRAELAQ
Sbjct:   15 KSKWGEGNKVYTR-----RFKRIAKNTTAAAPSSPTTTDTVAATSPPTTRTNTSNPTSPPTASNNEQ------NLATEDANSEHQ-----HTLSPVVEVSDDHS-----VQIAASPNQ----PTGNGVIKPVVVIVGDRVRINLKAAKAKNEIIELREKLRAELNQVRRVSQKLEDKEAELT-TFSAVLAVPADVEAYSHSQYSGNDIIERRALLRVNSEMGT-----------------------------DFVDRRALMRLNSDMGSAPNT-DMRPFRQLNVSVVDN--------------------NHGVGEFVEKEKRTPKANQYYRNSDFLLGKDRLPPETNKRQKANGGRKHSKESDYSSGHERHRNQMFKNCNNLLQRLMKHKHGWVFNEPVNAKLLGLHDYHDIIKHPMDFGTIKSRLAQNFYKSPMEFAEDVRLTFYNAMTYNPKGQDVHVMAEQLSNIFEERWSVIESESNPDWRYGMIYDANTPTPTSRTPTSRKAPHFAHA----PSRTLYRSESMSLPFMNRPKPKIAPPSRTPAPKKPKAKDPNKRNMTYEEKQKLSTNLQSLPSEKLDNIVQIIKKKNTSLSQHDDEIEVDIDSVDIETLWELDRFVTNYKKSLSKHRRRAELAQ 574
[Close]
BLAST of XM_017402436.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6S7P127 ((Uncharacterized protein {ECO:0000313|EMBL:CAB4106952.1}))

HSP 1 Score: 555.829 bits (1431), Expect = 0.000e+0
Identity = 326/642 (50.78%), Postives = 399/642 (62.15%), Query Frame = 0
 
Query:    9 KKRWGDLSKVYTRKKHNKRFKNC--DTGAVEPATSSATPVNEAVSTETITDITNNQEKVGVEKGGDSVQERPLELDLAEKDGNSTSQVEEVPKNLSPLNGVSDGLSNENQPQEGDNSTNKLQEVPNGNAVINPVVVRVDDRVRINFAATNSRDEIWELRRKLLNELDQVRSMSKQLQAKEVELSGVCSNTAAAPVGAAAYSLSQHSENN--ERREVVKVNSEVVSVRNLKLKPFRAVSNSVMENNGFASVRENDNLVDGSQLMRVNSELDSVVTVQEYRPFRQLNVSVPENINNSHAFRHLNVSVPQNNNHSHGFSEYIEKEKRTPKANQYYRNSDFLLAKDRLPPETNKKVKSNGRRKHG-QLDYASSIDRFWNQAFKSCRELLQRLMKHKHGWVFNEPVNARALGLHDYHDIIKHPMDLGTIKSKLAHYLYKSPREFADDVRLTFRNAKTYNPMGHDVHIMADQLSTIFEDRWAVIEAKYNPE----LIFDMNHYGGLPTPMSRKVVPTPPSSQPIFPERDLDRSEYMPEPVEFRPKPFVVPSVKTPVPKKPKAKDLNKRDMTFDEKRKLSVNLESLPVEKLESVVQIIKKRNSVLKQQDDEIELDIDSFDAETLWELDRFVTNYKKSLSKYRRRAELAQ 641
            K +WG+ +KVYTR     RFK    +T A  P++ +AT      +T   T  TN           ++      E +LA +D NS  Q       LSP+  VSD  S +        S N+    P GN VI PVVV V DRV+IN  A  S++EI ELR KL  EL+ VR +S++L+ KE EL+   S   A P     YS SQ+S N+  ERR +++VNSE+ +                             + VD   LMR+NS++ S     + RPFRQLNVSV +N N                   HG  E++EKEKRTPKANQYYRNSDFLL KDRLPPETNK+ K+NG RKH  + DY+S  +R  NQ FKSC  LLQRLMKHKHGWVFNEPVNA+ LGLHDYHDIIKHPMD GTIKS+LA   YKSP EFA+DVRLTF NA TYNP G DVH+MA+QLS IFE+RW+VIE++ NP+    +I+D N         + +  P    +    P R L RSE M  P   RPKP + P  +TP PKKPKAKD NKR+MT++EK+KLS NL+SLP EKL+++VQIIKK+N+ L Q DDEIE+DIDS D ETLWELDRFVTNYKKSLSK+RRRAELAQ
Sbjct:   35 KSKWGEGNKVYTR-----RFKRIAKNTTAAAPSSPTATDTVTVAATSPPTTRTNTSNPASPPTATNN------EQNLATEDANSEHQ-----HTLSPVVEVSDDHSVQIAV-----SPNR----PTGNGVIKPVVVIVGDRVKINLKAAKSKNEIIELREKLRAELNHVRRVSQKLEDKEAELT-TFSAVLAVPADVETYSHSQYSGNDIIERRALLRVNSEMGT-----------------------------DFVDRRALMRLNSDMGSAPNT-DLRPFRQLNVSVVDNNN-------------------HGVGEFVEKEKRTPKANQYYRNSDFLLGKDRLPPETNKRQKANGGRKHSKESDYSSGHERHRNQMFKSCNNLLQRLMKHKHGWVFNEPVNAKLLGLHDYHDIIKHPMDFGTIKSRLAQNFYKSPMEFAEDVRLTFYNAMTYNPKGQDVHVMAEQLSNIFEERWSVIESESNPDWRYGMIYDANTPTPTSRTPTSRKAPHFSHA----PSRTLYRSESMSLPFMNRPKPKIAPPSRTPAPKKPKAKDPNKRNMTYEEKQKLSTNLQSLPSEKLDNIVQIIKKKNTSLSQHDDEIEVDIDSVDIETLWELDRFVTNYKKSLSKHRRRAELAQ 597
[Close]
BLAST of XM_017402436.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6Z0Y1 ((Putative transcription factor GTE4 {ECO:0000313|EMBL:MPA37752.1}))

HSP 1 Score: 555.829 bits (1431), Expect = 0.000e+0
Identity = 338/683 (49.49%), Postives = 425/683 (62.23%), Query Frame = 0
 
Query:    7 QEKKRWGDLSKVYTRKKHNK-RFKNCDTGAVEPATSSATPVNEAVSTETITDITNNQEKVGVEKGGDSVQERPLELDLAEKDGNSTSQVEEVPKNLSPLNGVSDGLSNENQPQEGDNSTNKLQEVPNGNAVINPVVVRVDDRVRINFAATNSRDEIWELRRKLLNELDQVRSMSKQLQAKEVELSGVCSNTAAAPVGAAAYSLSQHSENNERREVVKVNSEVVSVRNLKLKPFRAVSNSVMENNGFASVRENDNLVDGSQLMRVNSELDSVVTVQEYRPFRQLNVSVPENINNSHAFRHLNVSVPQNNNHSHGFSEYIEKEKRTPKANQYYRNSDFLLAKDRLPP-ETNKKVKSNGRRKHGQLDYASSIDRFWNQAFKSCRELLQRLMKHKHGWVFNEPVNARALGLHDYHDIIKHPMDLGTIKSKLAHYLYKSPREFADDVRLTFRNAKTYNPMGHDVHIMADQLSTIFEDRWAVIEAKYNPELIFDMNHYGGLPTPMSRKVVPTPPSSQPIFPERDLDRSE-YMPEPVEFRPKPF-VVPSVKTPVPKKPKAKDLNKRDMTFDEKRKLSVNLESLPVEKLESVVQIIKKRNSVLKQQDDEIELDIDSFDAETLWELDRFVTNYKKSLSKYRRRAELA-QARAEAQKSIHAPNLDPAFTVAAEESKAGDTRVATKSLVQAEKQ 684
            +EK RWG+ +KVYTRK HNK R     +      T +        +T T T+  ++ +   V +             LA +D NS+ Q     + LS L+  SD  S++N P +   S     E PNGN V  PV+ +VD RVRIN AA  S+ EI ELRRKL++ELDQVRS  K+L+AKEV+++G  ++          YS SQ S ++                                            +++   L+R NSE+ SV  + + RPF+QL+VSV E IN                   HG  E++EKEKRTPKANQYYRNSDFLL K+RLPP E+NKKVKSNG++  G++ Y   +D++ +QA KSC  LL +LMKHKH WVFN PV+A+ALGLHDYHDIIKHPMDLGT+KS+LA   YKSPREFA+DVR TF NA TYNP G DVHIMA+QLS IFE++WAVIEA+YN +  ++M +  GLPTP SRK    P    P    R LDRS+  M  PV+ R K     P  +TPVPKKPKAKD +KRDMTF+EK++LS NL+SLP EKL+++VQIIKK NS L Q DDEIE+DIDS DAETLWELDRFVTNYKKSLSK +R+AELA QARAEA  ++ A N  PA    ++E+K  +  VAT S VQ EKQ
Sbjct:   12 REKHRWGEGNKVYTRKIHNKGRNNTTTSNNKNTTTDNNNNTTTTTTTTTTTNNNDDDDNNNVPQQSSQT--------LAAEDANSSQQ----QRTLSRLDAASDDSSSQNPPPQV--SAPNGHEPPNGNVVSKPVITKVDSRVRINLAAARSKYEIRELRRKLVSELDQVRSFVKKLEAKEVQVTGYSTS-------GGGYSHSQFSASD--------------------------------------------VINRGGLVRANSEVGSVGHL-DSRPFQQLSVSVIE-IN-------------------HGVGEFVEKEKRTPKANQYYRNSDFLLGKERLPPPESNKKVKSNGKKHGGEMGYRFGMDKYTSQALKSCSNLLAKLMKHKHAWVFNVPVDAKALGLHDYHDIIKHPMDLGTVKSRLAKNWYKSPREFAEDVRRTFHNAMTYNPKGQDVHIMAEQLSKIFEEKWAVIEAEYNVDWRYEMVYDVGLPTPTSRKTH-PPHPPIPAPEMRSLDRSQSMMTMPVDSRLKQSNSAPVGRTPVPKKPKAKDRDKRDMTFEEKQRLSTNLQSLPSEKLDNIVQIIKKSNSTLCQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELALQARAEATHAVPAINPTPAIVKESKETKTDEKNVATSSPVQEEKQ 607
[Close]
BLAST of XM_017402436.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A124SHS3 ((Bromodomain-containing protein {ECO:0000313|EMBL:KVI10456.1}))

HSP 1 Score: 555.444 bits (1430), Expect = 0.000e+0
Identity = 327/620 (52.74%), Postives = 404/620 (65.16%), Query Frame = 0
 
Query:   80 ELDLAEKDGNSTSQVEEVPKNLSPLNGVSDGLSNENQPQEG-DNSTNKLQEVPNGNAVINPVVVRVDDRVRINFAATNSRDEIWELRRKLLNELDQVRSMSKQLQAKEVELSGVCSNTAAAPVGAAAYSLSQHSENN--ERREVVKVNSEVVSVRNLKLKPFRAVSNSVMENNGFASV-RE-NDNLVDGSQLMRVNSELDSVVTVQEYRPFRQLNVSVPENINNSHAFRHLNVSVPQNNNHSHGFSEYIEKEKRTPKANQYYRNSDFLLAKDRLPPETNKKVKSNGRRKHG-QLDYASSIDRFWNQAFKSCRELLQRLMKHKHGWVFNEPVNARALGLHDYHDIIKHPMDLGTIKSKLAHYLYKSPREFADDVRLTFRNAKTYNPMGHDVHIMADQLSTIFEDRWAVIEAKYNPELIFDMNHYGGLPTPMSRKVVPTPPSSQPIF---PERDLDRSEYMPEPVEFRPKP--FVVPSVKTPVPKKPKAKDLNKRDMTFDEKRKLSVNLESLPVEKLESVVQIIKKRNSVLKQQDDEIELDIDSFDAETLWELDRFVTNYKKSLSKYRRRAELA-QARAEAQKSIHA--PNLDPAFTVAAEESKAGDTRVATKSLVQAEKQG 685
            E  LA +D NS  Q     +NLSP+  VSD  S +N+  E    S N+    P  N VI PV + VD RV+IN  A  S++EI ELR KL  ELD+VR ++++L+ KE EL+   +       G A YS SQ+S N+  ERR +++VNSE+                  ME      V RE   +++D   LMR+NSE+ SV    + RPFR L+VSV +N                    +HG  E++EKEKRTPKANQYYRNSDFLL KDRLPPE+NK+ K NG RKH  + DY+   +R   Q FKSC  LLQRLMKHKHGWVFNEPVNA+ LGLHDYHDIIKHPMDLGTIKS+LA   YKSPREFADDVRLTF NA TYNP G DVH+MA+QLS IFE+RW+VIE+++NP+  + M +    PTP SRKV        P F   P R L RSE M  P   R KP  F  PS +TP+PKKPKAKD NKR+MT++EK+KLS NL+SLP EKL+++VQIIKK+N+ L Q DDEIE+DIDS D ETLWELDRFVTNYKKSLSK++R+AELA QAR  A  +  A   NL  +   A +E+KA +  +A+    Q E++G
Sbjct:   77 EQTLATEDANSEKQ-----QNLSPVLEVSDDHSIQNRQLEVLAVSPNE----PTRNGVIKPVAILVDGRVKINVKAARSKNEIIELREKLRAELDRVRRLAQKLEDKEAELTAFSTVVGVGGDGEA-YSHSQYSGNDIVERRSLLRVNSEM--------------GTDFMERRALVRVDREMGSDVIDRRALMRLNSEVGSVAN-SDIRPFRPLSVSVVDN--------------------NHGVGEFVEKEKRTPKANQYYRNSDFLLGKDRLPPESNKRHKVNGGRKHSKESDYSIGHERHRTQMFKSCNNLLQRLMKHKHGWVFNEPVNAKQLGLHDYHDIIKHPMDLGTIKSRLAQNFYKSPREFADDVRLTFHNAMTYNPKGQDVHVMAEQLSNIFEERWSVIESEFNPDWRYGMIYDASTPTPTSRKV--------PHFAHAPPRTLYRSESMTLPFMTRQKPSKFAPPS-RTPMPKKPKAKDPNKRNMTYEEKQKLSTNLQSLPSEKLDNIVQIIKKKNTSLSQHDDEIEVDIDSVDIETLWELDRFVTNYKKSLSKHKRKAELAQQARVGAGNANQAVLENLATSIQQAPKENKANEKTLASTPPDQGERRG 642
[Close]
BLAST of XM_017402436.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A103Y492 ((Uncharacterized protein {ECO:0000313|EMBL:KVI02241.1}))

HSP 1 Score: 553.518 bits (1425), Expect = 0.000e+0
Identity = 340/699 (48.64%), Postives = 426/699 (60.94%), Query Frame = 0
 
Query:    7 QEKKRWGDLSKVYTRKKHNKRFKNCDTGAVEPAT--SSAT-----PVNEAVSTETITDITNNQEKVGVEKGGDSVQERPLELDLAEKDGNSTSQVEEVPKNLSPLNGVSDGLSNENQPQEGDNSTNKLQEVPNGNAVINPVVVRVDDRVRINFAATNSRDEIWELRRKLLNELDQVRSMSKQLQAKEVELSGVCSNTAAAPVGAAAYSLSQHSENN--ERREVVKVNSEVVSVRNLKLKPFRAVSNSVMENNGFASVRE--NDNLVDGSQLMRVNSELDSVVTVQEYRPFRQLNVSVPENINNSHAFRHLNVSVPQNNNHSHGFSEYIEKEKRTPKANQYYRNSDFLLAKDRLPPETNKKVKSNGRRKHG-QLDYASSIDRFWNQAFKSCRELLQRLMKHKHGWVFNEPVNARALGLHDYHDIIKHPMDLGTIKSKLAHYLYKSPREFADDVRLTFRNAKTYNPMGHDVHIMADQLSTIFEDRWAVIEAKYNPELIFDMNHYGGLPTPMSRKVVPTPPSSQPIFPERDLDRSEYMPEPVEFRPKPF-VVPSVKTPVPKKPKAKDLNKRDMTFDEKRKLSVNLESLPVEKLESVVQIIKKRNSVLKQQDDEIELDIDSFDAETLWELDRFVTNYKKSLSKYRRRAELA-QARAEAQKSIHAPNLDPAFTV--AAEESKAGDTRVATKSLVQAEKQGGDVS 689
            +EK +WG  +KVYTR+   K  KN    A    T  SSAT     PV  A +   IT   N Q                    L   D N   Q          L  V++  S+++  Q+      +   VP GN V+ PVV  VDDRV+I+  A+ S+++I ELR KL  ELDQVRS+ ++L+ KE EL+   +   AA +  A YS SQ+  N   +RR +++VNSE+ +                M+    A V      + +D   LMRVNSE+ S+   Q+ R FRQLNVSV +N                   +S G  E++EKEKRTPKANQYYRNSDFLL KDRLPPE+NK++KSNG RK+  + DY   ++R  NQ F+SC  LLQRLMKHKHGWVFNEPVNA+ LGLHDYHDIIKHPMDLGTIKS+LA   YK+P EFA+DVRLTF NA TYNP G DVH+MA+QLS IFE+RW VIE++YN +  +   H  G PTP SRKV     +     P R LDRSE M  P   RPKP    PS +TPV  KPKAKD NKR+MT++EK+KLS NL+SLP EKL+++VQIIKK N+ L Q DDEIE+DIDS D ETLWELDRFVTNYKKSLSK+RR+AELA QARA A  +      +PA ++  A  E +A +  +A     Q + +G +VS
Sbjct:   13 KEKSKWGGGNKVYTRRP-KKGIKNAAATATVSVTAVSSATTIPSSPVTTATAVSPITTANNEQT-------------------LTPDDANLRRQ--------QTLRRVAEA-SDDSSGQDLRQVVAEEAIVPTGNGVVRPVVTFVDDRVKIHLEASTSKNDIKELREKLTAELDQVRSLVQRLEDKEAELTNNSTLLGAAGIDEA-YSHSQYPGNVMIDRRALLRVNSEMGA--------------DYMDRRALARVHSEMRSDTIDRRALMRVNSEVGSLAN-QDTR-FRQLNVSVVDN-------------------NSLGAGEFVEKEKRTPKANQYYRNSDFLLGKDRLPPESNKRLKSNGGRKYSRESDYMIGLERQKNQVFRSCSNLLQRLMKHKHGWVFNEPVNAKQLGLHDYHDIIKHPMDLGTIKSRLAQNFYKNPSEFAEDVRLTFHNAMTYNPKGQDVHVMAEQLSNIFEERWTVIESEYNRDWRYGTIHGAGTPTPTSRKVHHFAHA-----PIRTLDRSEPMTLPYVSRPKPSNFAPSSRTPVQTKPKAKDPNKRNMTYEEKQKLSANLQSLPSEKLDNIVQIIKKSNTSLSQHDDEIEVDIDSVDVETLWELDRFVTNYKKSLSKHRRKAELAQQARALAGNANRTMLENPATSIPEAPTEKRAAEKSLAAIPANQGDIRGDNVS 641
[Close]
BLAST of XM_017402436.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6Z3W0 ((Putative transcription factor GTE4 {ECO:0000313|EMBL:MPA37753.1}))

HSP 1 Score: 551.206 bits (1419), Expect = 0.000e+0
Identity = 336/684 (49.12%), Postives = 425/684 (62.13%), Query Frame = 0
 
Query:    7 QEKKRWGDLSKVYTRKKHNK-RFKNCDTGAVEPATSSATPVNEAVSTETITDITNNQEKVGVEKGGDSVQERPLELDLAEKDGNSTSQVEEVPKNLSPLNGVSDGLSNENQPQEGDNSTNKLQEVPNGNAVINPVVVRVDDRVRINFAATNSRDEIWELRRKLLNELDQVRSMSKQLQAKEVELSGVCSNTAAAPVGAAAYSLSQHSENNERREVVKVNSEVVSVRNLKLKPFRAVSNSVMENNGFASVRENDNLVDGSQLMRVNSELDSVVTVQEYRPFRQLNVSVPENINNSHAFRHLNVSVPQNNNHSHGFSEYIEKEKRTPKANQYYRNSDFLLAKDRLPP-ETNKKVKSNGRRKHGQLDYASSIDRFWNQAFKSCRELLQRLMKHKHGWVFNEPVNARALGLHDYHDIIKHPMDLGTIKSKLAHYLYKSPREFADDVRLTFRNAKTYNPMGHDVHIMADQLSTIFEDRWAVIEAKYNPELIFDMNHYGGLPTPMSRKVVPTPPSSQPIFPERDLDRSE-YMPEPVEFRPKPF-VVPSVKTPVPKKPKAKDLNKRDMTFDEKRKLSVNLESLPVEKLESVVQIIKKRNSVLKQQDDEIELDIDSFDAETLWELDRFVTNYKKSLSKYRRRAELA-QARAEAQKSIHAPNLDPAFTVAAEESKAGDTRVATKSLVQAEKQG 685
            +EK RWG+ +KVYTRK HNK R     +      T +        +T T T+  N+      +   ++   +     LA +D NS+ Q     + LS L+  SD  S++N P +   S     E PNGN V  PV+ +VD RVRIN AA  S+ EI ELRRKL++ELDQVRS  K+L+AKEV+++G  ++          YS SQ S ++                                            +++   L+R NSE+ SV  + + RPF+QL+VSV E IN                   HG  E++EKEKRTPKANQYYRNSDFLL K+RLPP E+NKKVKSNG++  G++ Y   +D++ +QA KSC  LL +LMKHKH WVFN PV+A+ALGLHDYHDIIKHPMDLGT+KS+LA   YKSPREFA+DVR TF NA TYNP G DVHIMA+QLS IFE++WAVIEA+YN +  ++M +  GLPTP SRK    P    P    R LDRS+  M  PV+ R K     P  +TPVPKKPKAKD +KRDMTF+EK++LS NL+SLP EKL+++VQIIKK NS L Q DDEIE+DIDS DAETLWELDRFVTNYKKSLSK +R+AELA QARAEA  ++   N  PA   A +E+K  +  V+T S +Q E QG
Sbjct:   12 REKHRWGEGNKVYTRKIHNKGRNNTTTSNNKNTTTDNNNNTTTTTTTTTTTNNNNDDXNNDDDDNNNNNVPQQSSQTLAAEDANSSQQ----QRTLSRLDAASDDSSSQNPPPQ--VSAPNGHEPPNGNVVSKPVITKVDSRVRINLAAARSKYEIRELRRKLVSELDQVRSFVKKLEAKEVQVTGYSTS-------GGGYSHSQFSASD--------------------------------------------VINRGGLVRANSEVGSVGHL-DSRPFQQLSVSVME-IN-------------------HGVGEFVEKEKRTPKANQYYRNSDFLLGKERLPPPESNKKVKSNGKKHGGEMGYRFGMDKYTSQALKSCSNLLAKLMKHKHAWVFNVPVDAKALGLHDYHDIIKHPMDLGTVKSRLAKNWYKSPREFAEDVRRTFHNAMTYNPKGQDVHIMAEQLSKIFEEKWAVIEAEYNVDWRYEMVYDVGLPTPTSRKTH-PPHPPIPAPEMRSLDRSQSMMTMPVDSRLKQSNSAPVGRTPVPKKPKAKDRDKRDMTFEEKQRLSTNLQSLPSEKLDNIVQIIKKSNSTLCQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELALQARAEAIHAVPVMNPAPAVVEAPKETKTDERNVSTSSPIQEEMQG 616
[Close]
BLAST of XM_017402436.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6PTG7 ((Transcription factor like {ECO:0000313|EMBL:PSR96394.1}))

HSP 1 Score: 549.28 bits (1414), Expect = 0.000e+0
Identity = 334/691 (48.34%), Postives = 428/691 (61.94%), Query Frame = 0
 
Query:    5 EFQEKKRWGDLSKVYTRKKHNKRFKNCDTGAVEPATSSATPVNEAVSTETITDITNNQEKVGVEKGGDSVQERPLE-LDLAEKDGNSTSQVEEVPKNLSPLNGVSDGLSNENQPQEGDNSTNKLQEVPNGNAVINPVVVRVDDRVRINFAATNSRDEIWELRRKLLNELDQVRSMSKQLQAKEVELSGVCSNTAAAPVGAAAYSLSQHSENNERREVVKVNSEVVSVRNLKLKPFRAVSNSVMENNGFASVRENDNLVDGSQLMRVNSELDSVVTVQEYRPFRQLNVSVPENINNSHAFRHLNVSVPQNNNHSHGFSEYIEKEKRTPKANQYYRNSDFLLAKDRLPP-ETNKKVKSNGRRKHG-QLDYASSIDRFWNQAFKSCRELLQRLMKHKHGWVFNEPVNARALGLHDYHDIIKHPMDLGTIKSKLAHYLYKSPREFADDVRLTFRNAKTYNPMGHDVHIMADQLSTIFEDRWAVIEAKYNPELIFDMNHYGGLPTPMSRKVVPTPPSSQPIFPE-RDLDRSEYMPEPVEFRPKPFVVPSVKTPVPKKPKAKDLNKRDMTFDEKRKLSVNLESLPVEKLESVVQIIKKRNSVLKQQDDEIELDIDSFDAETLWELDRFVTNYKKSLSKYRRRAELA-QARAEAQKSIHAPNLDPAFTVAAEESKAGDTRVATKSLVQAEKQGGDVSS 690
            E +E+ RWG+ +KVYTRKK     KN  T +   A ++              + T  Q+         S Q  P E L+ ++K                 L   SD  SN +QP + D       E+P+ N    P++V+VDDRVRI+ A   S++EI EL+RKL++ELD+VRS++K+L+AKE++L+     + +   G   YS SQ+S N                                               DG  LMRVNSE+ SV +  + R FRQL+VSV EN                    ++G  E +EKEKRTPKANQYYRNS+FLL KDRLPP E+NKK+KSNG +KHG ++ Y   + ++ ++ F SC  LL RLMKHKH WVFN+PV+A+ALGLHDYHDIIKHPMDLGT+KS+LA   YKSPREFA+DVRLTFRNA TYNP G DVH+MA++LS IFE++WAVIE++Y+ +  F++ H  GLPTP SR V P PP+  P   E R L+R+E M   V+ R KP   P  +TPVPKKPKAKD NKRDMT++EK++LS +L+SLP EKL+S+VQIIKKRN+ L Q DDEIE+DIDS DAETLWELDRFVTNYKKSLSK +R+AELA QARAEA  ++ A N   A   A +ESKA +   AT S  Q E+QG +VS 
Sbjct:   10 ETRERNRWGENNKVYTRKKG---LKNITTTSTAAAATTFIATTANNKNNNNDNKTVPQQ---------SSQTLPTEELNFSQKQ----------------LAVGSDDASNHDQPPQVDVPNG--CELPSRNGDSRPIIVKVDDRVRIHLAGGRSKNEIQELKRKLVSELDEVRSLAKRLEAKEIQLT-----SYSIAGGGGGYSHSQYSAN-----------------------------------------------DGRALMRVNSEVGSV-SHHDSRLFRQLSVSVVEN--------------------NYGVGELVEKEKRTPKANQYYRNSEFLLGKDRLPPAESNKKLKSNGGKKHGREMGYGFGLSKYISKIFNSCNNLLSRLMKHKHAWVFNKPVDAKALGLHDYHDIIKHPMDLGTVKSRLAKNWYKSPREFAEDVRLTFRNAMTYNPKGQDVHVMAEELSMIFEEKWAVIESEYSLDWRFELVHDAGLPTPTSRMVQPFPPAQPPPALEIRTLERAESMIMAVDSRLKP-SAPVGRTPVPKKPKAKDPNKRDMTYEEKQRLSTHLQSLPPEKLDSIVQIIKKRNTTLSQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELALQARAEATTAVPATNPGSAVVEAPKESKADENNAAT-SPAQGERQGDNVSG 595
[Close]
BLAST of XM_017402436.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6Z196 ((Putative transcription factor GTE4 {ECO:0000313|EMBL:MPA37751.1}))

HSP 1 Score: 539.265 bits (1388), Expect = 0.000e+0
Identity = 336/689 (48.77%), Postives = 425/689 (61.68%), Query Frame = 0
 
Query:    1 MATIEFQEKKRWGDLSKVYTRKKHNKRFKNCDTGAVEPATSSATPVNEAVSTETITDITNNQEKVGVEKGGDSVQERPLELDLAEKDGNSTSQVEEVPKNLSPLNGVSDGLSNENQPQEGDNSTNKLQEVPNGNAVINPVVVRVDDRVRINFAATNSRDEIWELRRKLLNELDQVRSMSKQLQAKEVELSGVCSNTAAAPVGAAAYSLSQHSENNERREVVKVNSEVVSVRNLKLKPFRAVSNSVMENNGFASVRENDNLVDGSQLMRVNSELDSVVTVQEYRPFRQLNVSVPENINNSHAFRHLNVSVPQNNNHSHGFSEYIEKEKRTPKANQYYRNSDFLLAKDRLPP-ETNKKVKSNGRRKHG-QLDYASSIDRFWNQAFKSCRELLQRLMKHKHGWVFNEPVNARALGLHDYHDIIKHPMDLGTIKSKLAHYLYKSPREFADDVRLTFRNAKTYNPMGHDVHIMADQLSTIFEDRWAVIEAKYNPELIFDMNHYGGLPTPMSRKVVPTPPSSQPIFPERDLDRSE-YMPEPVEFRPKPF-VVPSVKTPVPKKPKAKDLNKRDMTFDEKRKLSVNLESLPVEKLESVVQIIKKRNSVLKQQDDEIELDIDSFDAETLWELDRFVTNYKKSLSKYRRRAELA-QARAEAQKSIHAPNLDPAFTVAAEESKAGDTRVATKSLVQAEKQ 684
            +A  + +EK RWG+ +KVYTRK HNK  KN +T A   A+++        +T T  +  +N           S   +P    LA ++ NS+ Q  +    LS L+  SD  S+ N P +   S    +E PN N  I P++ +VD+RVRIN AA  S+++I ELRRKL+ ELDQVRS+     AK++E   V     +   G   Y+ SQ S N+                                            +++   L+RVNSE+ SV  +                  +S  FRHL+VSV +NN   HG  E+IEKEKRTPK NQYYRNSDFLL K+RLPP E+NKK+K+N  +KHG ++ Y   +D++  QA KSC  LL +LMKHKH WVFN PV+A+ALGLHDYHDIIKHPMDLGT+KS+LA   YKSPREFA+DVR TF NA TYNP G DVHIMA+QLS IFE++WAVIEA+YN +  ++M +  GLPTP SRK    P    P    R LDRS+  M  PV+ R K     P  +TPVPKKPKAKD +KRDMTF+EK++LS NL+SLP EKL+++VQIIKK NS L Q DDEIE+DIDS DAETLWELDRFVTNYKKSLSK +R+AELA QARAEA  ++ A N  PA    ++E+K  +  VAT S VQ EKQ
Sbjct:    6 LAADDSREKHRWGEGNKVYTRKIHNKGLKNKNTAATAAASTTTDNNIITTTTTTNINNDDN-----------SNVPQPSSQTLATEEANSSQQQRQT---LSRLDAASDDSSSHNPPPQV--SAPNGREAPNENGAIKPIITKVDNRVRINLAAARSKNDIRELRRKLVTELDQVRSL-----AKKLEAKEVQLTGYSTGDGGGGYNHSQFSGND--------------------------------------------VINKGSLVRVNSEVGSVGHL------------------DSRPFRHLSVSVMENN---HGVGEFIEKEKRTPKVNQYYRNSDFLLGKERLPPPESNKKLKTNRGKKHGGEMGYGFVMDKYACQALKSCSNLLAKLMKHKHAWVFNVPVDAKALGLHDYHDIIKHPMDLGTVKSRLAKNWYKSPREFAEDVRRTFHNAMTYNPKGQDVHIMAEQLSKIFEEKWAVIEAEYNVDWRYEMVYDVGLPTPTSRKTH-PPHPPIPAPEMRSLDRSQSMMTMPVDSRLKQSNSAPVGRTPVPKKPKAKDRDKRDMTFEEKQRLSTNLQSLPSEKLDNIVQIIKKSNSTLCQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELALQARAEATHAVPAINPTPAIVKESKETKTDEKNVATSSPVQEEKQ 607
[Close]
BLAST of XM_017402436.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7HA25 ((Uncharacterized protein {ECO:0000313|EMBL:KAF5948648.1}))

HSP 1 Score: 538.88 bits (1387), Expect = 0.000e+0
Identity = 301/563 (53.46%), Postives = 373/563 (66.25%), Query Frame = 0
 
Query:  129 EVPNGNAVINPVVVRVDDRVRINFAATNSRDEIWELRRKLLNELDQVRSMSKQLQAKEVELSGVCSNTAAAPVGAAAYSLSQHSENNERREVVKVNSEVVSVRNLKLKPFRAVSNSVMENNGFASVRENDNLVDGSQLMRVNSELDSVVTVQEYRPFRQLNVSVPENINNSHAFRHLNVSVPQNNNHSHGFSEYIEKEKRTPKANQYYRNSDFLLAKDRLPP-ETNKKVKSNGRRKHG-QLDYASSIDRFWNQAFKSCRELLQRLMKHKHGWVFNEPVNARALGLHDYHDIIKHPMDLGTIKSKLAHYLYKSPREFADDVRLTFRNAKTYNPMGHDVHIMADQLSTIFEDRWAVIEAKYNPELIFDMNHYGGLPTPMSRKVVPTPPSSQPIFPERDLDRSEYMPEPVEFRPKPFVVPSVKTPVPKKPKAKDLNKRDMTFDEKRKLSVNLESLPVEKLESVVQIIKKRNSVLKQQDDEIELDIDSFDAETLWELDRFVTNYKKSLSKYRRRAELA-QARAEAQKSIHAPNLDPAFTVAAEESKAGDTRVATKSLVQAEKQGGDV 688
            E PNGN  + P++ +V++RVRI+  A   ++EI  L+RKL+NELDQVR + K+L+AKEV+LSG  S       G   YS SQ+S N                                               DG  L RVNSE+ SV    + RPF+QL+VSV EN                    +HG  E+IEKEKRTPKANQYYRNS+FLL KDRLPP E+NKK+KSNG +KHG ++ Y   +D++ +QA KSC  LL RLMKHKHGWVFN PV+A+ALGLHDYH II HPMDLGT+KS+L+   YKSPREFA+DVRLTFRNA TYNP G DVH+MA++LS IFE++WA IE++YN +  +++ H  GLPTP SRKV P PP  Q I   R L+R+    E V  + KP   P  +TPVPKKPKAKDL+KRDMT++EK++LS NL+SLP EKL+++VQIIKKRNS L Q DDEIE+DIDS DAETLWELDRFVTNYKKSLSK +R+AE+A QARAE    +   N  PA   A +ESK G+   AT S  Q E++G +V
Sbjct:   23 EPPNGNGAVKPIITKVENRVRIDLEAAREKNEIGTLKRKLVNELDQVRGLVKELEAKEVQLSG-YSLAVVVGGGGGGYSHSQYSGN-----------------------------------------------DGRVLARVNSEVGSV-GHHDSRPFQQLSVSVMEN--------------------NHGVGEFIEKEKRTPKANQYYRNSEFLLGKDRLPPAESNKKLKSNGGKKHGREMGYGFGMDKYTSQALKSCNNLLARLMKHKHGWVFNTPVDAKALGLHDYHIIINHPMDLGTVKSRLSKNWYKSPREFAEDVRLTFRNAMTYNPKGQDVHLMAEELSNIFEEKWAAIESEYNLDWRYELVHDVGLPTPTSRKVHPPPPPLQ-IPDVRSLERA----ESVTGKLKPH-APVARTPVPKKPKAKDLHKRDMTYEEKQRLSTNLQSLPTEKLDNIVQIIKKRNSALSQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKIKRKAEIALQARAETATGVPGMNPAPASVQAPKESKIGEQNAATASPAQGERKGDNV 510
Match NameStatsDescription
A0A5J5ABF0E-Value: 0.000e+0, PID: 50.07(Uncharacterized protein {ECO:0000313|EMBL:KAA8526... [more]
A0A2J6MF73E-Value: 0.000e+0, PID: 50.78(Uncharacterized protein {ECO:0000313|EMBL:PLY9825... [more]
A0A6S7P127E-Value: 0.000e+0, PID: 50.78(Uncharacterized protein {ECO:0000313|EMBL:CAB4106... [more]
A0A5B6Z0Y1E-Value: 0.000e+0, PID: 49.49(Putative transcription factor GTE4 {ECO:0000313|E... [more]
A0A124SHS3E-Value: 0.000e+0, PID: 52.74(Bromodomain-containing protein {ECO:0000313|EMBL:... [more]
A0A103Y492E-Value: 0.000e+0, PID: 48.64(Uncharacterized protein {ECO:0000313|EMBL:KVI0224... [more]
A0A5B6Z3W0E-Value: 0.000e+0, PID: 49.12(Putative transcription factor GTE4 {ECO:0000313|E... [more]
A0A2R6PTG7E-Value: 0.000e+0, PID: 48.34(Transcription factor like {ECO:0000313|EMBL:PSR96... [more]
A0A5B6Z196E-Value: 0.000e+0, PID: 48.77(Putative transcription factor GTE4 {ECO:0000313|E... [more]
A0A7J7HA25E-Value: 0.000e+0, PID: 53.46(Uncharacterized protein {ECO:0000313|EMBL:KAF5948... [more]
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Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.
NCBI peptide blastp to SwissProt and TrEMBL without DCAR
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.