Resource Type:
Polypeptide
Name:
XM_017367503.1
Identifier:
XM_017367503.1-protein
Sequence:
MKLGGVQVAKSGSMPSSSSHGSTQQFPAGLRVLVVDDDPTCLMILEKMLR
TCHYEATKCNRAEIALNLLRENRNGYDIVLSDVHMPDMDGFKLLEHIGLE
MDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVRLEALKNIWQHVVRRKK
HVWKDIEQSGSVEDGKLQQQTPDDADYLSSANEGSWRNSKRRKDEEEDAD
DRDDDTSSLKKPRVVWSVELHQQFVAAANQLGIDKAVPKKILELMNVPGL
TRENVASHLQKYRLYLRRLSGQHQNALNGSFMGNPEATYGSISSFNDLEL
QAYAASGQLPAQNLAALQAAAFGRSSSKSVVSPLDQRNLFSFETPKLRFG
EGQQQHLSNSKQVNFLHGIPTNMEPKQLANFHQAANSFGINMQVGSHGTQ
GSSLMMQMAQPQSRSQIQNDISGSYVSRLPPSIGQPVVSNVVSNGTSRVL
TRPVYNHQVSQTSPVAGISTHHSNDLMRNSFPLGGNSGISSLASKVIPRE
EAPIEIKGSQGGSNYDVYSGQQQRKSQDWTIQNSGLAFDTLQHANMRGNL
DVSQAALVQQSFSSRDAIEQSRNSSVLPSVLLQQGYPSSGHSSSSSFGKG
IFSGVEENGHRNMPNTGQQLNAYFTDTSPRVKAELLEGNFYNNLLPDQYD
QEDLMSALLKHQQEGIVTVENDFDFDGYPLDNLPV
Sequence Length:
685
Sequence Checksum:
dd04af8896976d76223d80dc11af3754
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017367503.1, derives from mRNA, XM_017367503.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017367503.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017367503.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6YQH2 (Two-component response regulator {ECO:0000256|PIRNR:PIRNR036392})
HSP 1 Score: 856.284 bits (2211), Expect = 0.000e+0
Identity = 463/707 (65.49%), Postives = 540/707 (76.38%), Query Frame = 0
Match: A0A5B6YQH2 (Two-component response regulator {ECO:0000256|PIRNR:PIRNR036392})
HSP 1 Score: 856.284 bits (2211), Expect = 0.000e+0
Identity = 463/707 (65.49%), Postives = 540/707 (76.38%), Query Frame = 0
Query: 1 MKLGGVQVAKSGSMPSSS-----SHGSTQQFPAGLRVLVVDDDPTCLMILEKMLRTCHYEATKCNRAEIALNLLRENRNGYDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVRLEALKNIWQHVVRRKKHVWKDIEQSGSVEDGKLQQQTPDDADYLSSANEGSWRNSKRRKDEEEDADDRDDDTSSLKKPRVVWSVELHQQFVAAANQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSG--QHQNALNGSFMGNPEATYGSISSFNDLELQAYAASGQLPAQNLAALQAAAFGRSSSKSVVSP--LDQRNLFSFETPKLRFGEGQQQHLS-NSKQVNFLHGIPTNMEPKQLANFHQAANSF-GINMQVGSHGTQGSSLMMQMAQPQSRSQIQNDISGSYVSRLPPSIGQPVVSNVVSNGTSRVLTR---------PVYNHQVSQTSPVAGISTHHSNDLMRNSFPLGGNSGISSLASKVIPREEAPIEIKGSQGG-SNYDVYSGQQQRKSQDWTIQNSGLAFDTLQHANMRGNLDVSQAALVQQSFSSRDAIEQSRNSSVLPSVLLQQGYPSSGHSSSSSFGKGIFSGVEENGHRNMPNTGQQLNAYFTDTSPRVKAELL-EGNFYNNLLPDQYDQEDLMSALLKHQQEGIVTVENDFDFDGYPLDNLPV 685
M LGG AKS MPSSS G + QFPAGLRVL+VDDDPTCLMILEKMLR C YE TKCNRAEIAL+LLRENRNG+DIV+SDVHMPDMDGFKLLEH+GLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVR+EALKNIWQHVVR++K+ WKD EQSGS+EDG+ Q + +DA+Y SSANEG+WRNSKRRK +EED + DDTS+LKKPRVVWSVELHQQFVAA NQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSG QHQ+ LN SFMG P+AT+GSISS N L+LQA AA+GQLPAQ+LA LQAAA GRS++KS +S +DQRNLFSFETPKLRFGEGQQQ LS NSKQ+N HGIPT MEPKQLAN HQ+A S G+N+QV +HG Q SSL++ MAQP+SR Q+ N+ +GS +SRLP S+ QP++S+ +S+G VL R VYN VSQ S + S + + DL N+F LG NSG+SSLASK + +EE E+KGS+G +YD+++ Q KSQDW +QN GL FD QHAN +G+LDV + LV Q FSS Q+RN+ + G +FS EE+GHRN N GQQLN D S RVKAE L + + N L P+ + QEDLMSALLK QQ+GIV VEN+F+FDG+PLDNLPV
Sbjct: 1 MNLGG-HGAKSVLMPSSSVAWKSGDGVSDQFPAGLRVLLVDDDPTCLMILEKMLRNCLYEVTKCNRAEIALSLLRENRNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDFEQSGSMEDGEPQPKPSEDAEYSSSANEGNWRNSKRRK-DEEDEAEERDDTSALKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSGLNNSFMGPPDATFGSISSLNGLDLQALAATGQLPAQSLATLQAAALGRSTTKSGISMPFVDQRNLFSFETPKLRFGEGQQQQLSNNSKQMNLFHGIPTTMEPKQLANLHQSAQSLRGMNVQVNAHGNQSSSLLVHMAQPESRVQMVNETNGSQISRLPSSMPQPILSSGISSG---VLARNGIVDRVRGAVYN-SVSQASSMVDFSVNQNADLPGNNFRLGNNSGVSSLASKGVLQEEVNSEMKGSRGFVQSYDIFNELHQHKSQDWELQNVGLTFDASQHANTQGSLDVPPSVLVHQGFSSGQKNGQNRNTYI---------------------GNTMFSAGEESGHRNALNIGQQLNTLLADNSLRVKAERLPDVSCENALFPEHFGQEDLMSALLK-QQDGIVPVENEFNFDGFPLDNLPV 679
BLAST of XM_017367503.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5ACB6 (Response regulatory domain-containing protein {ECO:0000259|PROSITE:PS50110})
HSP 1 Score: 842.417 bits (2175), Expect = 0.000e+0
Identity = 461/732 (62.98%), Postives = 537/732 (73.36%), Query Frame = 0
Match: A0A5J5ACB6 (Response regulatory domain-containing protein {ECO:0000259|PROSITE:PS50110})
HSP 1 Score: 842.417 bits (2175), Expect = 0.000e+0
Identity = 461/732 (62.98%), Postives = 537/732 (73.36%), Query Frame = 0
Query: 1 MKLGGVQVAKSGSMPSSS---SHGSTQQFPAGLRVLVVDDDPTCLMILEKMLRTCHYEATKCNRAEIALNLLRENRNGYDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVRLEALKNIWQHVVRRKKHVWKDIEQSGSVEDGKLQQQTPDDADYLSSANEGSWRNSKRRKDEEEDADDRDDDTSSLKKPRVVWSVELHQQFVAAANQLGIDKAVPKKILELMNVPGLTRENVASH---------------------------LQKYRLYLRRLSG--QHQNALNGSFMGNPEATYGSISSFNDLELQAYAASGQLPAQNLAALQAAAFGRSSSKSVVS-PL-DQRNLFSFETPKLRFGEGQQQHL-SNSKQVNFLHGIPTNMEPKQLANFHQAANSF-GINMQVGSHGTQGSSLMMQMAQPQSRSQIQNDISGSYVSRLPPSIGQPVVSNVVSNGTSRVLTR---------PVYNHQVSQTSPVAGISTHHSNDLMRNSFPLGGNSGISSLASKVIPREEAPIEIKGSQGG-SNYDVYSGQQQRKSQDWTIQNSGLAFDTLQHANMRGNLDVSQAALVQQSFSSRDAIEQSRNSSVLPSVLLQQGYPSSGHSSSSSFGKGIFSGVEENGHRNMPNTGQQLNAYFTDTSPRVKAELL-EGNFYNNLLPDQYDQEDLMSALLKHQQEGIVTVENDFDFDGYPLDNLPV 685
M LGG AKS SMPS+S G QFP GLRVLVVDDD TCLMIL+KMLRTC Y+ TKCNRAEIAL+LLREN+NG+DIV+SDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVR+EALKNIWQHVVR++KH WKD EQSGS+E+G+ Q + +DADY +SANEG+WRNSKRRK +EED + DDTS+LKKPRVVWSVELHQQFVAA NQLGIDKAVPKKILELMNVPGLTRENVASH LQKYRLYLRRLSG QHQ+ LN SFMG EA +GS++S N L+LQA AA+GQ P Q+LA LQAAA GRS+SKS +S PL DQRNLFSFETPKL FGEGQQQ L +NSKQ+N LHGIPT MEPK LAN HQ+A SF G+N+QV +HG Q SSL+ MAQPQSR Q+ N+ +GS +SRLP S+ QP++SN ++ SRVL R VYN V+Q S + S + + DL NSFPLG NSG+SSL SK + +EE E+KGS+G S+YD+++ Q KSQDW +QN GL F+ QHAN +G++DV + LV Q FSS Q+R++S+ G +FS EE+GH N N+G QLN + TD S RVKAE L + + N L P+Q+ QEDLMSALLK QQEGI VENDF FDGYPLDNLPV
Sbjct: 1 MNLGG-HAAKSLSMPSTSWKSGDGVPDQFPVGLRVLVVDDDSTCLMILQKMLRTCLYDVTKCNRAEIALSLLRENKNGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKHEWKDFEQSGSLEEGEQQPKLSEDADYSTSANEGNWRNSKRRK-DEEDEVEERDDTSALKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQLLRIGTPSPPTEILPPLRVLNCGHLLQKYRLYLRRLSGVSQHQSGLNNSFMGPTEAAFGSMASLNGLDLQALAATGQFPVQSLATLQAAALGRSTSKSGISMPLVDQRNLFSFETPKLSFGEGQQQQLGNNSKQMNLLHGIPTTMEPKALANLHQSAQSFGGMNLQVNAHGNQSSSLLGHMAQPQSRMQMVNETNGSQISRLPSSLVQPIMSNGIA---SRVLARNGMVDNGRGAVYN-SVTQASSLVDFSVNQNTDLPGNSFPLGNNSGMSSLTSKGVLQEEVSSEMKGSRGFVSSYDIFNELHQHKSQDWELQNIGLTFEASQHANRQGSMDVPPSVLVHQGFSSCQKSRQNRDTSI---------------------GNAMFSAGEESGHGNASNSGHQLNTFLTDNSLRVKAERLPDVSCQNTLFPEQFGQEDLMSALLK-QQEGIGPVENDFCFDGYPLDNLPV 704
BLAST of XM_017367503.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5C183 (Two-component response regulator {ECO:0000256|PIRNR:PIRNR036392})
HSP 1 Score: 822.387 bits (2123), Expect = 0.000e+0
Identity = 431/655 (65.80%), Postives = 502/655 (76.64%), Query Frame = 0
Match: A0A5J5C183 (Two-component response regulator {ECO:0000256|PIRNR:PIRNR036392})
HSP 1 Score: 822.387 bits (2123), Expect = 0.000e+0
Identity = 431/655 (65.80%), Postives = 502/655 (76.64%), Query Frame = 0
Query: 1 MKLGGVQVAKSGSMPSSS-----SHGSTQQFPAGLRVLVVDDDPTCLMILEKMLRTCHYEATKCNRAEIALNLLRENRNGYDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVRLEALKNIWQHVVRRKKHVWKDIEQSGSVEDGKLQQQTPDDADYLSSANEGSWRNSKRRKDEEEDADDRDDDTSSLKKPRVVWSVELHQQFVAAANQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSG--QHQNALNGSFMGNPEATYGSISSFNDLELQAYAASGQLPAQNLAALQAAAFGRSSSKSVVS-PL-DQRNLFSFETPKLRFGEGQQQHLS-NSKQVNFLHGIPTNMEPKQLANFHQAANSF-GINMQVGSHGTQGSSLMMQMAQPQSRSQIQNDISGSYVSRLPPSIGQPVVSNVVS------NGTSRVLTRPVYNHQVSQTSPVAGISTHHSNDLMRNSFPLGGNSGISSLASKVIPREEAPIEIKGSQGG-SNYDVYSGQQQRKSQDWTIQNSGLAFDTLQHANMRGNLDVSQAALVQQSFSSRDAIEQSRNSSVLPSVLLQQGYPSSGHSSSSSFGKGIFSGVEENGHRNMPNTGQQLNAYFTDTSPR-VKAELL 636
M LGG AKS SMPS+S G + QFP GLRVL+VDDDPTCLMILEKMLR C YE TKCNRAEIAL+LLRENRNG+DIV+SDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVR+EALKNIWQHVVR+KKH WKD EQSGS+EDG+ Q + +D +Y SSANEG+WRNSKRRKD E++ ++R DDTS+LKKPRVVWSVELHQQFVAA NQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSG QHQN LN SFMG PEAT+GSISS N L+LQA AA+GQLPAQ+LA LQAA+ GRS+SKS +S PL DQRNLFSFETPKLRFGEG QQ LS NSKQ+N HGIPT +EPKQLAN HQ+A SF G+NMQV +HG+Q SSL+ MAQP+SR+Q+ N+ +GS +SRL ++ QP++++ +S NGT + VYN VSQ + + S + + DL NSF LG N G+SSL+SK + +EE ++KGS G +YD+++ Q+KSQDW +QN GL FD QHAN +G+LDV + LV Q FSS Q+RN+ + G +FS EE+GHRN PN GQQLNA D S R VK ELL
Sbjct: 1 MNLGG-HAAKSLSMPSTSVSWKSGDGVSDQFPVGLRVLLVDDDPTCLMILEKMLRNCLYEVTKCNRAEIALSLLRENRNGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKKKHEWKDFEQSGSMEDGESQAKPSEDVEYSSSANEGNWRNSKRRKDGEDEVEER-DDTSALKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQNGLNNSFMGPPEATFGSISSLNGLDLQALAATGQLPAQSLATLQAASLGRSTSKSGMSMPLVDQRNLFSFETPKLRFGEGHQQQLSNNSKQMNLFHGIPTTLEPKQLANLHQSAQSFRGMNMQVNAHGSQSSSLLAHMAQPESRTQMGNETNGSQISRLSSTMAQPILTSGISTGVLARNGTVDRVRGAVYN-PVSQVTSMVDFSVNQNTDLSGNSFCLGNNPGVSSLSSKGVLQEEVNSKMKGSSGFLPSYDIFNELHQQKSQDWELQNVGLTFDASQHANTQGSLDVPPSVLVHQGFSSGQKSGQNRNTYL---------------------GNTMFSAGEESGHRNAPNIGQQLNALLADNSLRGVKTELL 631
BLAST of XM_017367503.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7GL06 (Two-component response regulator {ECO:0000256|PIRNR:PIRNR036392})
HSP 1 Score: 816.994 bits (2109), Expect = 0.000e+0
Identity = 454/702 (64.67%), Postives = 524/702 (74.64%), Query Frame = 0
Match: A0A7J7GL06 (Two-component response regulator {ECO:0000256|PIRNR:PIRNR036392})
HSP 1 Score: 816.994 bits (2109), Expect = 0.000e+0
Identity = 454/702 (64.67%), Postives = 524/702 (74.64%), Query Frame = 0
Query: 7 QVAKSGSMPSSS---SHGSTQQFPAGLRVLVVDDDPTCLMILEKMLRTCHYEATKCNRAEIALNLLRENRNGYDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVRLEALKNIWQHVVRRKKHVWKDIEQSGSVEDGKLQQQTPDDADYLSSANEGSWRNSKRRKDEEEDADDRDDDTSSLKKPRVVWSVELHQQFVAAANQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSG--QHQNALNGSFMGNPEATYGSISSFNDLELQAYAASGQLPAQNLAALQAAAFGRSSSKSVVS-PL-DQRNLFSFETPKLRFGEG---QQQHLSNSKQVNFLHGIPTNMEPKQLANFHQAA-NSF-GINMQV-GSHGTQGSSLMMQMAQ-PQSRSQIQNDISGSYVSRLPPSIGQPVVSN-------VVSNGTSRVLTRPVYNHQVSQTSPVAGISTHHSNDLMRNSFPLGGNSGISSLASKVIPREEAPIEIKGSQG-GSNYDVYSGQQQRKSQDWTIQNSGLAFDTLQHANMRGNLDVSQAALVQQSFSSRDAIEQSRNSSVLPSVLLQQGYPSSGHSSSSSFGKGIFSGVEENGHRNMPNTGQQLNAYFTDTSPRVKAELL-EGNFYNNLLPDQYDQEDLMSALLKHQQEGIVTVENDFDFDGYPLDNLPV 685
Q AKS SMP+SS G FPAGLRVLVVDDDPTCLMILEKML C YE TKCNRAE+AL+LLREN+NGYDIV+SDVHMPDMDGFKLLEHIGLEMDLPVIMMSADD K+VVMKGVTHGACDYLIKPVR+EALKNIWQHVVR++KH WKDIEQSGS+EDG+ QQ+ DDAD+ SSANEGSWR KRRKDEE+ +DR DDTS+LKKPRVVWSVELHQQFVAA NQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSG QHQ+ LN SF G P+AT+GS+SSFN L+LQA AA+GQ+PAQ+LA LQAAA GRS++KS +S PL DQRNLFSFE PKLRFGEG QQ +N+KQ+N LHGIPT MEPKQLAN HQ+A SF G+NMQV +HG Q SSL++QM+Q PQSR QI ND + +++SRLP S+ QP +S + NG VYN VSQ S + S + DL NSFPL N S++ SK + REE E+KGS+G +YD++S Q KSQDW +QN GLAF+ QH+NM+G LDV + LV Q FSS Q+RN+SV GK +FS EE+GH N N QQLN + D S +KAE L E + N L P+Q+ QEDLMS LLK QQEG+ V N+F FDGYPLD+LPV
Sbjct: 6 QTAKSMSMPNSSVSWKSGEPDPFPAGLRVLVVDDDPTCLMILEKMLLNCLYEVTKCNRAEMALSLLRENKNGYDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKSVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKHEWKDIEQSGSIEDGEQQQKQTDDADFSSSANEGSWR--KRRKDEEDQVEDR-DDTSALKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSGLNNSFGGPPDATFGSVSSFNGLDLQALAATGQIPAQSLATLQAAALGRSTTKSGISVPLMDQRNLFSFEGPKLRFGEGSQQPQQSNNNNKQINLLHGIPTTMEPKQLANLHQSAQQSFRGMNMQVNNAHGNQSSSLLVQMSQPPQSRPQILNDTNVNHLSRLPSSLPQPTLSGGMPSSAALARNGMVDNARGAVYN-SVSQASSMVDFSITQNTDLPGNSFPLANNP--SAITSKGVLREEVNSEMKGSRGFAPSYDIFSDLHQHKSQDWELQNVGLAFNASQHSNMQGCLDVQPSVLVHQGFSSNQNSLQNRNTSV---------------------GKVMFSAGEESGHGNAHNIDQQLNTFVADNS-LIKAESLPEASCQNMLFPEQFTQEDLMSILLK-QQEGLGQVANEFGFDGYPLDDLPV 678
BLAST of XM_017367503.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6PJP6 (Two-component response regulator {ECO:0000256|PIRNR:PIRNR036392})
HSP 1 Score: 815.839 bits (2106), Expect = 0.000e+0
Identity = 434/687 (63.17%), Postives = 511/687 (74.38%), Query Frame = 0
Match: A0A2R6PJP6 (Two-component response regulator {ECO:0000256|PIRNR:PIRNR036392})
HSP 1 Score: 815.839 bits (2106), Expect = 0.000e+0
Identity = 434/687 (63.17%), Postives = 511/687 (74.38%), Query Frame = 0
Query: 21 GSTQQFPAGLRVLVVDDDPTCLMILEKMLRTCHYEATKCNRAEIALNLLRENRNGYDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVRLEALKNIWQHVVRRKKHVWKDIEQSGSVEDGKLQQQTPDDADYLSSANEGSWRNSKRRKDEEEDADDRDDDTSSLKKPRVVWSVELHQQFVAAANQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSG--QHQNALNGSFMGNPEATYGSISSFNDLELQAYAASGQLPAQNLAALQAAAFGRSSSKSVVSP--LDQRNLFSFETPKLRFGEGQQQHL-SNSKQVNFLHGIPTNMEPKQLANFHQAANSF--GINMQVGS--HGTQGSSLMMQMAQPQSRSQIQNDISGSYVSRLPPSIGQPVVSNVVSNGTSRVLTR---------PVYNHQVSQTSPVAGISTHHSNDLMRNSFPLGGNSG--ISSLASKVIPREEAPIEIKGSQG-GSNYDVYSGQQQRKSQDWTIQNSGLAFDTLQHANMRGNLDVSQAALVQQSFSSRDAIEQSRNSSVLPSVLLQQGYPSSGHSSSSSFGKGIFSGVEENGHRNMPNTGQQLNAYFTDTSPRVKAELL-EGNFYNNLLPDQYDQEDLMSALLKHQQEGIVTVENDFDFDGYPLDNLPV 685
G + FP GLRVLVVDDDPTCLMILEKMLR C YE TKCNRAEIAL+LLREN+NG+DIV+SDVHMPDMDGFKLLEH+GLEMDLPVIMMSADDSK+VVMKGVTHGACDYLIKPVR+EAL+NIWQHVVR++KH WKD+EQSGS+EDG +Q+ +DAD+ SSANEGSWRNSKRRKDEE+ A++R DD+S+LKKPRVVWSVELHQQFVAA NQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSG QH LN SFMG PE +GSISS N L+LQA+AA+GQLPAQ+LA L+AAA GRS++KS +S +DQRNLFSFE PKLRF + QQ L +N+KQ+N LHGIPTNMEPKQLAN HQ+A S G+NMQ S HG+Q SSL+MQM+QP SR Q+ NDI+ +++SRLP SI QP + + + +G VL R +YN SQ S + S + + DL N F L N+G + ++ SK + +EE E+KGS+G +YD++S QQ KSQDW + N GL FD QH+NMR LDV + LVQQ FSS + Q+R S+ FGK IF EE+G N N GQQL+ S RVKAE L E + N L +QY QEDLMSALLK QQEG+ N+F FDGY LDNLPV
Sbjct: 25 GVSDHFPVGLRVLVVDDDPTCLMILEKMLRNCLYEVTKCNRAEIALSLLRENKNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVMKGVTHGACDYLIKPVRIEALRNIWQHVVRKRKHEWKDLEQSGSIEDGDREQKPSEDADFSSSANEGSWRNSKRRKDEEDQAEER-DDSSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHPGGLNNSFMGPPETPFGSISSLNGLDLQAFAAAGQLPAQSLATLEAAALGRSTTKSGISMPFMDQRNLFSFENPKLRFRDSQQPQLGNNNKQMNLLHGIPTNMEPKQLANLHQSAQSSFRGMNMQPNSNPHGSQSSSLLMQMSQPPSRPQMFNDINRNHLSRLPSSIAQPTLPSGMGSG---VLARHGMVENARGAIYN-SASQASTMVDFSINQNTDLPGNGFQLANNAGGQMPTVTSKGLLQEEVNSEMKGSRGFAHSYDIFSELQQHKSQDWGLPNVGLTFDASQHSNMRSGLDVPPSVLVQQGFSSNQSNVQNR---------------------STPFGKAIFLAAEESGCGNGLNIGQQLDTLLAGNSLRVKAESLPEASCQNTLFHEQYSQEDLMSALLK-QQEGVGPASNEFGFDGYALDNLPV 684
BLAST of XM_017367503.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0GKW6 (Two-component response regulator {ECO:0000256|PIRNR:PIRNR036392})
HSP 1 Score: 813.142 bits (2099), Expect = 0.000e+0
Identity = 437/700 (62.43%), Postives = 516/700 (73.71%), Query Frame = 0
Match: A0A7J0GKW6 (Two-component response regulator {ECO:0000256|PIRNR:PIRNR036392})
HSP 1 Score: 813.142 bits (2099), Expect = 0.000e+0
Identity = 437/700 (62.43%), Postives = 516/700 (73.71%), Query Frame = 0
Query: 13 SMPSSSSH-----GSTQQFPAGLRVLVVDDDPTCLMILEKMLRTCHYEATKCNRAEIALNLLRENRNGYDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVRLEALKNIWQHVVRRKKHVWKDIEQSGSVEDGKLQQQTPDDADYLSSANEGSWRNSKRRKDEEEDADDRDDDTSSLKKPRVVWSVELHQQFVAAANQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSG--QHQNALNGSFMGNPEATYGSISSFNDLELQAYAASGQLPAQNLAALQAAAFGRSSSKSVVSP--LDQRNLFSFETPKLRFGEGQQQHL-SNSKQVNFLHGIPTNMEPKQLANFHQAANSF--GINMQVGS--HGTQGSSLMMQMAQPQSRSQIQNDISGSYVSRLPPSIGQPVVSNVVSNGTSRVLTR---------PVYNHQVSQTSPVAGISTHHSNDLMRNSFPLGGNSG--ISSLASKVIPREEAPIEIKGSQG-GSNYDVYSGQQQRKSQDWTIQNSGLAFDTLQHANMRGNLDVSQAALVQQSFSSRDAIEQSRNSSVLPSVLLQQGYPSSGHSSSSSFGKGIFSGVEENGHRNMPNTGQQLNAYFTDTSPRVKAELL-EGNFYNNLLPDQYDQEDLMSALLKHQQEGIVTVENDFDFDGYPLDNLPV 685
SMPSSS+ G + FP GLRVLVVDDDPTCLMILEKMLR C YE TKCNRAEIAL+LLREN+NG+DIV+SDVHMPDMDGFKLLEH+GLEMDLPVIMMSADDSK+VVMKGVTHGACDYLIKPVR+EAL+NIWQHVVR++KH WKD+EQSGS+EDG QQ+ +DAD+ SSANEGSWRNSKRRKDEE+ A++RDD +S+LKKPRVVWSVELHQQFV A NQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSG QH LN SF+G PE +GSISS N L+LQA AA+GQLPAQ+LA L+AAA GRS++KS +S +DQRNLFSFE PKLRF + QQ L +N+KQ+N LHGIPTNMEPKQLAN HQ+A S G+NMQ S HG Q SSL++QM+QP SR Q+ ND + +++SR+P SI QP + + + +G VL R +YN SQ S + S + + DL N F L N+G ++++ASK + +EE E+KGS+G +YD++S QQ KSQDW + N GL FD QH+NMRG LDV PSVL+QQ ++ + + FGK IFS EENG N PN QQL+ S RVKAE L E + N L +QY QEDLMSALLK QQEG+ V N+F FDGY LDNLPV
Sbjct: 2 SMPSSSASWKSGDGVSDHFPVGLRVLVVDDDPTCLMILEKMLRNCLYEVTKCNRAEIALSLLRENKNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVMKGVTHGACDYLIKPVRIEALRNIWQHVVRKRKHEWKDLEQSGSIEDGDRQQKPSEDADFSSSANEGSWRNSKRRKDEEDQAEERDD-SSTLKKPRVVWSVELHQQFVVAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHPGGLNNSFVGPPETPFGSISSLNGLDLQALAATGQLPAQSLATLEAAALGRSTTKSGISMPFMDQRNLFSFENPKLRFRDDQQPQLGNNNKQMNLLHGIPTNMEPKQLANLHQSAQSSFRGMNMQPNSNPHGNQSSSLLVQMSQPPSRPQMFNDTNSNHLSRIPSSIAQPTLPSGMGSG---VLARNGMVENARGAIYN-SASQASTMVDFSINQNTDLPGNGFLLANNAGGQMATVASKGLLQEEVTSEMKGSRGFARSYDIFSELQQHKSQDWGLPNVGLTFDASQHSNMRGGLDVQ------------------------PSVLVQQ---NNVQNRITPFGKVIFSAAEENGRGNGPNISQQLDTLLAGNSLRVKAESLPEASCQNTLFHEQYSQEDLMSALLK-QQEGVGPVTNEFGFDGYALDNLPV 668
BLAST of XM_017367503.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5N6RFM7 (Two-component response regulator {ECO:0000256|PIRNR:PIRNR036392})
HSP 1 Score: 810.061 bits (2091), Expect = 0.000e+0
Identity = 431/677 (63.66%), Postives = 506/677 (74.74%), Query Frame = 0
Match: A0A5N6RFM7 (Two-component response regulator {ECO:0000256|PIRNR:PIRNR036392})
HSP 1 Score: 810.061 bits (2091), Expect = 0.000e+0
Identity = 431/677 (63.66%), Postives = 506/677 (74.74%), Query Frame = 0
Query: 24 QQFPAGLRVLVVDDDPTCLMILEKMLRTCHYEATKCNRAEIALNLLRENRNGYDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVRLEALKNIWQHVVRRKKHVWKDIEQSGSVEDGKLQQQTPDDADYLSSANEGSWRNSKRRKDEEEDADDRDDDTSSLKKPRVVWSVELHQQFVAAANQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSG--QHQNALNGSFMGNPEATYGSISSFNDLELQAYAASGQLPAQNLAALQAAAFGRSSSKSVVS-PL-DQRNLFSFETPKLRFGEGQQQHLSNSKQVNFLHGIPTNMEPKQLANFHQAANSFG-INMQVGSHGTQGSSLMMQMAQPQSRSQIQNDISGSYVSRLPPSIGQPVVSNVVS------NGTSRVLTRPVYNHQVSQTSPVAGISTHHSNDLMRNSFPLGGNSGISSLASKVIPREEAPIEIKGSQGG-SNYDVYSGQQQRKSQDWTIQNSGLAFDTLQHAN-MRGNLDVSQAALVQQSFSSRDAIEQSRNSSVLPSVLLQQGYPSSGHSSSSSFGKGIFSGVEENGHRNMPNTGQQL-NAYFTDTSPRVKAELL-EGNFYNNLLPDQYDQEDLMSALLKHQQEGIVTVENDFDFDGYPLDNLPV 685
+QFPAGLRVLVVDDDPTCL+ILEKMLRTC YE TKCNRAEIAL+LLREN+NG+DIV+SDVHMPDMDGFKLLE IGLEMDLPVIMMSADD KNVVMKGVTHGACDYLIKPVR+EAL+NIWQHVVR++K+ WKD+EQSGSVEDG QQ+ +D DY SSANEG+W++SK+RK +EE+ + DDTS+LKKPRVVWSVELHQQFVAA NQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSG QHQN LN SFM EA +G +SS L+LQ S QLPAQ+LA LQAA GRS++KS + PL DQRN+FSFE PKLRFGEGQQQHLSNSK +N LHGIPT MEPKQLA HQ+A S G +NMQV +HG Q SSL+MQMAQPQSR QI N+ +GS+V R P SIGQP++SN ++ NG S YN QV TS + +H+ +L NSFPLG GISS+ASK EE E+KGS G ++YD+++ Q K+QDW +QN GL FD Q+AN ++GNL+VS + LV Q +SS Q+RN+S L G+G+FSG++ RN N GQ L N D S RVKAE + + + L P+ + QEDLMSALLK QQ GI E +FDFDGY +DN+PV
Sbjct: 27 EQFPAGLRVLVVDDDPTCLVILEKMLRTCLYEVTKCNRAEIALSLLRENKNGFDIVISDVHMPDMDGFKLLERIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALRNIWQHVVRKRKNEWKDVEQSGSVEDGDRQQKPSEDVDYSSSANEGNWKSSKKRK-DEEEDAEERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQNGLNNSFMSPQEAPFGPMSSLGGLDLQTLGVSCQLPAQSLATLQAAGLGRSTTKSGIQMPLVDQRNIFSFENPKLRFGEGQQQHLSNSKPINLLHGIPTTMEPKQLATLHQSAQSLGSLNMQVNAHGGQSSSLLMQMAQPQSRGQILNESTGSHVPRHPSSIGQPIMSNGIAGGVIGRNGISDNGRGTGYN-QVPPTSSMLSFPMNHTTELTVNSFPLGSTPGISSVASKGSFHEEVSSEMKGSTGFLASYDIFNDLHQHKTQDWELQNVGLHFDASQNANPIQGNLEVSPSVLVHQGYSSSQRNGQNRNASPL--------------------GRGMFSGLDGTEQRNTQNAGQHLNNNLLIDNSVRVKAERIPDASSQTTLFPEHFGQEDLMSALLKQQQGGIEPAETEFDFDGYSMDNIPV 681
BLAST of XM_017367503.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: B9RZK5 (Two-component response regulator {ECO:0000256|PIRNR:PIRNR036392})
HSP 1 Score: 806.594 bits (2082), Expect = 0.000e+0
Identity = 432/700 (61.71%), Postives = 515/700 (73.57%), Query Frame = 0
Match: B9RZK5 (Two-component response regulator {ECO:0000256|PIRNR:PIRNR036392})
HSP 1 Score: 806.594 bits (2082), Expect = 0.000e+0
Identity = 432/700 (61.71%), Postives = 515/700 (73.57%), Query Frame = 0
Query: 12 GSMPSSSSHGSTQ-------QFPAGLRVLVVDDDPTCLMILEKMLRTCHYEATKCNRAEIALNLLRENRNGYDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVRLEALKNIWQHVVRRKKHVWKDIEQSGSVEDGKLQQQTPDDADYLSSANEGSWRNSKRRKDEEEDADDRDDDTSSLKKPRVVWSVELHQQFVAAANQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSG--QHQNALNGSFMGNPEATYGSISSFNDLELQAYAASGQLPAQNLAALQAAAFGRSSSKS--VVSPLDQRNLFSFETPKLRFGEGQQQHLSNSKQVNFLHGIPTNMEPKQLANFHQAANSFG-INMQVGSHGTQG---SSLMMQMAQPQSRSQIQNDISGSYVSRLPPSIGQPVVSNVVSNGTSRVLTR--------PVYNHQVSQTSPVAGISTHHSNDLMRNSFPLGGNSGISSLASKVIPREEAPIEIKGSQG-GSNYDVYSGQQQRKSQDWTIQNSGLAFDTLQHAN-MRGNLDVSQAALVQQSFSSRDAIEQSRNSSVLPSVLLQQGYPSSGHSSSSSFGKGIFSGVEENGHRNMPNTGQQLNAYFTDTSPRVKAE-LLEGNFYNNLLPDQYDQEDLMSALLKHQQEGIVTVENDFDFDGYPLDNLPV 685
GSM ++SS + + QFPAGLRVLVVDDDPTCLMILEKMLRTC YE TKCNRAE AL+LLREN+NGYDIV+SDVHMPDMDGFKLLEHIGLEMDLPVIMMSAD++K+VVMKGVTHGACDYLIKPVR+EALKNIWQHVVR+K++ WKD+EQSGSVE+G Q + +DADY SSANEG+WRNSK+RK +EE+ D DDTS+LKKPRVVWSVELHQQFVAA NQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSG QHQN L +F+ EATYG +SSFN ++LQ AA+GQLPAQ+LA LQAA GRS+ KS + +DQRNLFSFE PKLRFGEGQQQ L+NSKQ+N LHGIPT+MEPKQLAN H +A S G +NMQV +HG QG +SL+MQM+Q QSR Q+ N+ ++V LP SIGQPV+S ++ G VL R VYN VSQ+S + +++++L NSFPL N GISSL +K +EE EIKGS G +YD++S Q KS DW +QN G+ F+ Q N ++ NLDV + Q FSS +RN SV+ GK +FS + H N+ + GQ +N +F + S RVK+E + + N NL P+Q+ QEDLMSALLK QQ G+ ENDFDFDGYPLDN+PV
Sbjct: 8 GSMSTASSSVAWKAGEVVPDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGYDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADEAKSVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKKRNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWRNSKKRK-DEEEEGDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQNNLGNAFISPQEATYGPLSSFNGIDLQTLAATGQLPAQSLATLQAAGLGRSAVKSRMPIPIVDQRNLFSFENPKLRFGEGQQQQLNNSKQMNLLHGIPTSMEPKQLANIHHSAQSIGSMNMQVNAHGGQGGQSNSLLMQMSQSQSRGQMLNETCVTHVPALPSSIGQPVISTAIAGG---VLARNGLAESRGAVYN-SVSQSSSIINFPLNNTSELSGNSFPLASNPGISSLTTKGAFQEEDNSEIKGSVGFMPSYDIFSDLNQHKSHDWELQNVGITFNASQQNNSLQRNLDVEPSVFSHQRFSSNQRTVPNRNMSVM--------------------GKPMFSTGDATDHVNVQSAGQHVNTFFAENSARVKSEPIADANCQTNLFPEQFGQEDLMSALLKQQQGGVGPAENDFDFDGYPLDNIPV 682
BLAST of XM_017367503.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6PW58 (Two-component response regulator {ECO:0000256|PIRNR:PIRNR036392})
HSP 1 Score: 801.586 bits (2069), Expect = 0.000e+0
Identity = 426/687 (62.01%), Postives = 505/687 (73.51%), Query Frame = 0
Match: A0A2R6PW58 (Two-component response regulator {ECO:0000256|PIRNR:PIRNR036392})
HSP 1 Score: 801.586 bits (2069), Expect = 0.000e+0
Identity = 426/687 (62.01%), Postives = 505/687 (73.51%), Query Frame = 0
Query: 18 SSHGSTQQFPAGLRVLVVDDDPTCLMILEKMLRTCHYEATKCNRAEIALNLLRENRNGYDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVRLEALKNIWQHVVRRKKHVWKDIEQSGSVEDGKLQQQTPDDADYLSSANEGSWRNSKRRKDEEEDADDRDDDTSSLKKPRVVWSVELHQQFVAAANQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSG--QHQNALNGSFMGNPEATYGSISSFNDLELQAYAASGQLPAQNLAALQAAAFGRSSSKSVVSP--LDQRNLFSFETPKLRFGEGQQQHL-SNSKQVNFLHGIPTNMEPKQLANFHQAANSF--GINMQVGS--HGTQGSSLMMQMAQPQSRSQIQNDISGSYVSRLPPSIGQPVVSN------VVSNGTSRVLTRPVYNHQVSQTSPVAGISTHHSNDLMRNSFPLGGNSG--ISSLASKVIPREEAPIEIKGSQG-GSNYDVYSGQQQRKSQDWTIQNSGLAFDTLQHANMRGNLDVSQAALVQQSFSSRDAIEQSRNSSVLPSVLLQQGYPSSGHSSSSSFGKGIFSGVEENGHRNMPNTGQQLNAYFTDTSPRVKAELL-EGNFYNNLLPDQYDQEDLMSALLKHQQEGIVTVENDFDFDGYPLDNLPV 685
S G + FP GLRVL+VDDDPTCLMILEKMLR C YE TKCNRAEIAL+LLREN+NG+DIV+SDVHMPDMDGFKLLEH+GLEMDLPVIMMSADDSK+VVM GVTHGACDYLIKPVR+EAL+NIWQHVVR++KH WKD+EQSGS+EDG QQ+ +DAD+ SSANEGSWRNSKRRKDEE+ A++R DD+S+LKKPRVVWSVELHQQFV A NQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSG QH LN SF+G PE +GSISS N L+LQA AA+GQLPAQ+LA L+AAA GRS++KS +S +DQRNLFSFE PKLRF + QQ L +N+KQ+N LHGIPTNMEPKQLAN HQ+A S G+NMQ S HG Q SSL++QM+QP SR Q+ ND + ++ S +P SI QP + + + NG +YN SQ S + S + + DL N F L N+G ++++ASK + +EE E+KGS+G +YD++S Q KSQDW + N GL FD QH+NMRG LDV PSVL+QQ ++ + + FGK IFS EE+G N PN GQQL+ S RVKAE L E + N L +QY+QEDLMSALLK QQEG+ V N+F FDGY LDNLPV
Sbjct: 22 SGDGVSDHFPVGLRVLLVDDDPTCLMILEKMLRNCLYEVTKCNRAEIALSLLRENKNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVMNGVTHGACDYLIKPVRIEALRNIWQHVVRKRKHEWKDLEQSGSIEDGDRQQKPSEDADFSSSANEGSWRNSKRRKDEEDQAEER-DDSSTLKKPRVVWSVELHQQFVVAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHPGGLNNSFVGPPETPFGSISSLNGLDLQALAATGQLPAQSLATLEAAALGRSTTKSGISMPFMDQRNLFSFENPKLRFRDDQQPQLGNNNKQMNLLHGIPTNMEPKQLANLHQSAQSSFRGMNMQPNSNHHGNQSSSLLVQMSQPPSRPQMFNDTNSNHFSMIPSSIAQPTLPSGMGSGVLARNGIVENARGAIYN-SASQASTMVDFSINQNTDLPGNGFLLANNAGGQMATVASKGLLQEEVTSEMKGSRGLAPSYDIFSELHQHKSQDWGLPNVGLTFDASQHSNMRGGLDVP------------------------PSVLVQQ---NNVQNRITPFGKAIFSAAEESGRGNGPNIGQQLDTLLAGNSLRVKAESLPEASCQNTLFHEQYNQEDLMSALLK-QQEGVGPVTNEFGFDGYALDNLPV 678
BLAST of XM_017367503.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A061EWK1 (Two-component response regulator {ECO:0000256|PIRNR:PIRNR036392})
HSP 1 Score: 797.349 bits (2058), Expect = 0.000e+0
Identity = 419/677 (61.89%), Postives = 506/677 (74.74%), Query Frame = 0
Match: A0A061EWK1 (Two-component response regulator {ECO:0000256|PIRNR:PIRNR036392})
HSP 1 Score: 797.349 bits (2058), Expect = 0.000e+0
Identity = 419/677 (61.89%), Postives = 506/677 (74.74%), Query Frame = 0
Query: 25 QFPAGLRVLVVDDDPTCLMILEKMLRTCHYEATKCNRAEIALNLLRENRNGYDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVRLEALKNIWQHVVRRKKHVWKDIEQSGSVEDGKLQQQTPDDADYLSSANEGSWRNSKRRKDEEEDADDRDDDTSSLKKPRVVWSVELHQQFVAAANQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSG--QHQNALNGSFMGNPEATYGSISSFNDLELQAYAASGQLPAQNLAALQAAAFGRSSSKS-VVSPL-DQRNLFSFETPKLRFGEGQQQHLSNSKQVNFLHGIPTNMEPKQLANFHQAANSFG-INMQVGSHGTQGS---SLMMQMAQPQSRSQIQNDISGSYVSRLPPSIGQPVVSNVVS------NGTSRVLTRPVYNHQVSQTSPVAGISTHHSNDLMRNSFPLGGNSGISSLASKVIPREEAPIEIKGSQG-GSNYDVYSGQQQRKSQDWTIQNSGLAFDTLQHAN-MRGNLDVSQAALVQQSFSSRDAIEQSRNSSVLPSVLLQQGYPSSGHSSSSSFGKGIFSGVEENGHRNMPNTGQQLNAYFTDTSPRVKAELLEGNFYNNLLPDQYDQEDLMSALLKHQQEGIVTVENDFDFDGYPLDNLPV 685
QFPAGLRVLVVDDDPTCLMILEKMLRTC YE TKCNRAE AL+LLREN+NG+DIV+SDVHMPDMDGFKLLEHIGLEMDLPVIMMSADD K+VVMKGVTHGACDYLIKPVR+EALKNIWQHVVR++K+ WKD EQSGSVE+G Q + ++ADY SSANEG+W++SK+RK +++D + DDTS+LKKPRVVWSVELHQQFVAA NQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSG QHQ+ LN SFM EAT+G +S N L+LQ AA+GQLPAQ+LA QAA GRS++KS + PL DQRN+FSFE PKLRFGEGQQQH++N+KQ+N LHGIPT MEPKQLA+ H +A S G INMQV SHG QGS SL++QMAQPQ R QI ND +GS+ RLP ++GQP++SN ++ NG + P YN VSQTS + +H+++L NSFPLG GISSL SK +E+ ++KGS G +YD+++ Q K Q+W +QN G+ FD QH+N ++GNLD++Q+ LVQQ FSS Q+R+++V+ K +FS + N N LN D + R+K+E + NL PD + QEDLMSALLK QQ+GI EN+FDFDGY +DN+PV
Sbjct: 28 QFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKHVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDFEQSGSVEEGDRQPKQSEEADYSSSANEGNWKSSKKRK-DDDDEAEERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSNLNNSFMSPQEATFGPLSPLNGLDLQTLAATGQLPAQSLATFQAAGLGRSTAKSGIAMPLVDQRNIFSFENPKLRFGEGQQQHMNNNKQLNLLHGIPTTMEPKQLASLHHSAQSIGNINMQVTSHGVQGSQNNSLLIQMAQPQPRGQILNDSTGSHAPRLPSTLGQPILSNGIAANVSTRNGIPENIRGPGYN-PVSQTSSLLNFPMNHTSELPGNSFPLGTTPGISSLTSKGAFQEDINSDVKGSGGFMPSYDIFNDLNQHKPQNWELQNVGMTFDASQHSNSLQGNLDLAQSILVQQGFSSGQMNGQNRSAAVV--------------------SKAMFSAGDCTEQGNAQNVNHHLNNLLVDNTIRIKSERVADAGPANLFPDHFGQEDLMSALLK-QQDGIAPAENEFDFDGYSMDNIPV 681
| Match Name | Stats | Description |
|---|---|---|
| A0A5B6YQH2 | E-Value: 0.000e+0, PID: 65.49 | Two-component response regulator {ECO:0000256|PIRN... [more] |
| A0A5J5ACB6 | E-Value: 0.000e+0, PID: 62.98 | Response regulatory domain-containing protein {ECO... [more] |
| A0A5J5C183 | E-Value: 0.000e+0, PID: 65.80 | Two-component response regulator {ECO:0000256|PIRN... [more] |
| A0A7J7GL06 | E-Value: 0.000e+0, PID: 64.67 | Two-component response regulator {ECO:0000256|PIRN... [more] |
| A0A2R6PJP6 | E-Value: 0.000e+0, PID: 63.17 | Two-component response regulator {ECO:0000256|PIRN... [more] |
| A0A7J0GKW6 | E-Value: 0.000e+0, PID: 62.43 | Two-component response regulator {ECO:0000256|PIRN... [more] |
| A0A5N6RFM7 | E-Value: 0.000e+0, PID: 63.66 | Two-component response regulator {ECO:0000256|PIRN... [more] |
| B9RZK5 | E-Value: 0.000e+0, PID: 61.71 | Two-component response regulator {ECO:0000256|PIRN... [more] |
| A0A2R6PW58 | E-Value: 0.000e+0, PID: 62.01 | Two-component response regulator {ECO:0000256|PIRN... [more] |
| A0A061EWK1 | E-Value: 0.000e+0, PID: 61.89 | Two-component response regulator {ECO:0000256|PIRN... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |