MKVSDEITGDCVGNRKTFSFSSNWTIASGSFDDSVNFESSESPIDADGVD
SADKAPLVLKPSESDSSPCEITLSLTQKHEIRQVYVRSTARTYEIYYKPD
VHSSNEYLCTVRCSTASREDDSLHESNHGEGSTEPTKESDRDYKEKKSPS
SANEDGWVEVKKPESPVEVIKSMPKAIFGDERNLQDFYEATAEISDGEPS
VTLIIRLLSLENKGLVYVDEIYVYADAVESADLDNYAAQNLQGGALAGSS
LMTMFLPTLLQLTRSNVGQSQNGLNSRKVVEEESAERSRNIDSTNYSNEH
YKRSKVLDRQDAEFQEVTEVTAQATPQFKNLAPNVENPGQYHSVVDCNNH
VGRVMEQLNSRMSQIEDICLRFEEKMVRPISSMEERLQRLENQLETIVKN
TQTSELHSCARFSAPAFSSLDSTSSSFYNDGCANPPHVQSEVEKHEPSCD
DISKSTEENFKSGRAPQFIPSYVVTAPEFLCDEDDEQNDAVAPLKDSPGE
LPKKPMSIDDALAAALAGFSSLTISEPQKLSEKFTKSPNEEIGINEDSLD
RPLEESIHRASNFHRDLLMKNPCTMNVDVEFINEETAGEEHLKYTQGLKF
TAPDFASEDTICDVKVLTPGIEDVNLVHPSRTFATDGGENILDITSAPSN
LSALEKEETSIVRKTNVSEQFCEGQTDADTFGGANNSVSVRSQGGYPATE
ETSDLSALKREETTIVCKTNVSEQFCEGQSDAYTVGGANNSVSVRAEGDY
PDTEETSLQESSSRKDELPIWERLAILQQVHEKNNATVGTKGKKCDERDE
FVKHILAQKNFVKHLLAKTKNSVGTAEKNSGPISICERVELVKQLLAKTE
DTAEKISGPLLECSEGGSGNGFSLGSVKDDYWATGEIGMLESSSSNILDR
IKIIEQLGAKIKDGVGSKEKNLSPTSECDERGSGNDISSWLDFETPILEV
KFTSQENTSSELSLKALLTNTEADSQISFTQKSKDDEITTKENDLGSVVI
EEGNPTWESNNFLLVDLESYDAPVSSEDVAGHQVPLDIKEHEVLPSLI
| Relationships |
|---|
| The polypeptide, XM_017371218.1, derives from mRNA, XM_017371218.1. |

Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
Match: A0A061E360 ((Uncharacterized protein {ECO:0000313|EMBL:EOX96668.1}))
HSP 1 Score: 376.711 bits (966), Expect = 3.374e-113
Identity = 237/561 (42.25%), Postives = 331/561 (59.00%), Query Frame = 0
Query: 17 TFSFSSNWTIASGSFDDSVNFESSESPI-----------DADGVDSADKAPLVLKPSESDSS-PCEITLSLTQKHEIRQVYVRSTARTYEIYYKPDVHSSNEYLCTVRCSTASREDDSLHESNHGEGSTEPTKESDRDYKEKK----SPSSANEDGWVEVKKPESPVEVIKSMPKAIFGDERNLQDFYEATAEISDGEPSVTLIIRLLSLENKGLVYVDEIYVYADAVESADLDNYAAQNLQGGALAGSSLMTMFLPTLLQLTRSNVGQSQNGLNSRKVVEEESAERS--RNIDSTNYSNE--HYKRSKVLDRQDAEFQEVTEVTAQATPQFKNLAPNVENPGQYHSVVDCNNHVGRVMEQLNSRMSQIEDICLRFEEKMVRPISSMEERLQRLENQLETIVKNTQTSELHSCARFSAPAFSSLDSTSSSFYNDGCANPPHVQSEVEKHEPSCDDISKSTEENFKSG----------RAPQFIPSYVVTAPEFLCDEDDEQNDAVAPLKDSPGELPKKPMSIDDALAAALAGFSSLTISEPQKLSEKFT-KSP---NEEIG 543
++S S+NW+IA GS SV FESS +P+ D V S K+PL+L P+ DS+ PCEIT++ QK E+RQVYVRSTAR YEIY+ P SNEYLCTVRC ASRE++ LH +N E + K ++++ EK+ S S++NED WVEVK P++P V+ S + + QD YEATAEI+D P +++ +RLLSL+NKG V VDE+YV+ D VES D +N Q G+ GSSLM M PTLLQL+++ + +S E E + + + I+ N +NE R + ++Q++ + + PQ K+ G+ + C H+ + +E L SR+S++E + L+FEE M++PISS++ RLQR+E QLE + K + SEL SC R+SAP FS DS + + YN G +E SCDD+ +S E++F S A Q PS VVTAPEF + DDE++D + + DSP + PK+ MSIDDALA+ALA F S T EPQK ++ T K+P NEE G
Sbjct: 10 SWSSSTNWSIAGGSLPSSVTFESSFAPLTDSDEYEHDIHDPSAVGSTPKSPLILCPTSPDSTTPCEITIAFAQKQEVRQVYVRSTARVYEIYHAPKHQGSNEYLCTVRCGIASREEEVLHAANLDEAALAHLKGANKELDEKRLKNDSNSNSNEDDWVEVKAPDTP--VLDSGSRVPSNFSVSAQDLYEATAEINDANPCMSITLRLLSLQNKGCVCVDELYVFGDPVESDDSENEVGQM---GSAGGSSLMAMLAPTLLQLSKTACLRQIQNEDSFGAKENEKTQENGPKTIEPLNCANEIPQEGRPGLANQQESIAATIELNRHEIPPQLKD--------GEAKGDLSC-GHIEKFLEHLVSRVSRVEGLLLKFEENMLKPISSIDARLQRVEQQLEELTKKPKNSELPSCTRYSAPEFSCHDSDNYTPYNIG-------------NESSCDDLCESHEKDFSSSLQCDEIIYSVNATQSFPSLVVTAPEF-SNADDEEDDHASKI-DSPKDKPKQTMSIDDALASALASFLSSTSIEPQKYTQALTVKAPDFSNEEDG 541
HSP 2 Score: 46.2098 bits (108), Expect = 4.125e-2
Identity = 54/213 (25.35%), Postives = 94/213 (44.13%), Query Frame = 0
Query: 836 CERVELVKQLLAKTEDTAEKISGPLLECSEG-----GSGNGFSLGSVKDDYWATGEIGMLESSSSN----ILDRIKIIEQ-LGAKIKDGVGSKEKNLSPTSECDERGSGNDI--------------SSWLDFETPILEVKFTSQENTSSELSLKALLTNTEADSQISFTQKS-----KDDEITTKENDLGSVVIEEGNPTW-ESNNFLLVDLE 1018
C +VK + + +E+ ++E EG G+ + + D + G++G E SS +LD I+ Q L + DG G+ E+ + +E + + SS +DFE+PIL+VKFTSQ+N++ + L+ALL + S + FT K D+ + D + + +G P ++ VDL+
Sbjct: 579 CPSERIVKATCSLNDHDSEQTIKEVVEDCEGQVTWHGTVDCIVSSARHDLHQIAGDVGNGEVSSGTSKTLVLDEADILNQFLENHVDDGSGADEEGVPGDTEIKAEVTKQGLHEEFLQNVLELSYSSSVVDFESPILDVKFTSQDNSNDKSPLEALLFDI---SDMPFTDNGTSCSKKSDDGSQAGEDFNLISVGDGEPACPATDGHFSVDLD 788
Match: A0A5B6ZBJ1 ((Uncharacterized protein {ECO:0000313|EMBL:MPA41158.1}))
HSP 1 Score: 377.481 bits (968), Expect = 3.808e-113
Identity = 248/548 (45.26%), Postives = 338/548 (61.68%), Query Frame = 0
Query: 14 NRKTFSFSSNWTIASGSFDDSVNFESSESPIDADGVDSADKAPLVLKPSESDSSPCEITLSLTQKHEIRQVYVRSTARTYEIYYKPDVHSSNEYLCTVRCSTASREDDSLHESNHGEGSTEPTKESDRDYKEKKSPSSAN----EDGWVEVKKPESPVEVIK--SMPKAIFGDERNL-QDFYEATAEISDGEPSVTLIIRLLSLENKGLVYVDEIYVYADAVESADLDNYAAQNLQGGALAGSSLMTMFLPTLLQLTRSNVGQSQNGLNSRKVVEEESAERSRNIDSTNYSNEHYKRSKVLDRQDAEFQEVTEVTAQATPQFKNLAPNVENPGQYHSVVDCNNHVGRV---MEQLNSRMSQIEDICLRFEEKMVRPISSMEERLQRLENQLETIVKNTQTSELHSCARFSAPAFSSLDSTSSSFYNDGCANPPHVQSEVEKHEPSCDDISKSTEENFKSGRAPQFIPSYVVTAPEFLCDEDDEQNDAVAPLKDSPGELPKKPMSIDDALAAALAGFSSLTISEPQKLSEKFT-KSPNEEIGINEDSLD 550
N ++ +NWTI GS D SV FESS+ P D++ V+S ++PL+LKP D PCEI +S TQKHE+RQVYVRSTAR YEIYY + SSNEYLCTVRC A+R+ + LH ++ E E K S + ++K N ED WVEVK P+SP++ + S+P I + + QD YEATAEI+D +P ++L +RLLSL++KG VYVDE+YV+AD VESA+ DN Q +Q G A SSLM M +PTLLQL+++ V + QN S + + + E + S + ++ + D+QD + + TA+ PQ + ++ ++ SV+ + GR+ +EQL SR+S+IEDIC RFEE M++PIS+ME RLQR+E QLE + KN+ S S R SAPAFS +S SSS YNDG P E+EK + S +S S ++ S A Q + S VVTAPEF C + +E NDA P K SP E PK+ +SIDDALAAALAGF + T + ++ T K+P E I E+ D
Sbjct: 31 NSTSWISETNWTIDHGSLDASVTFESSDYPTDSENVNSKIRSPLILKPPSPDCGPCEIKISFTQKHEVRQVYVRSTARVYEIYYASALQSSNEYLCTVRCGIAARDQELLHAADIEEPVCEHFKGSAGELAKEKFKDDGNTGTSEDDWVEVKAPDSPLQDNRNSSLPVKIDANTGTIIQDLYEATAEITDADPCISLTLRLLSLQSKGCVYVDEVYVFADPVESANSDN---QAVQAGNSAESSLMAMLVPTLLQLSKTGVSRIQNKHASDTMEQRQGLEIGSSSTSFGNGTQQDEKFSIADQQDVNLPAMNKATAEP-PQVQIPTKVLDGEQKHDSVLKGDLPYGRIERALEQLVSRVSRIEDICSRFEENMLKPISNMEARLQRVEQQLEVLAKNSLYSVFPSGTRISAPAFSCNESNSSSSYNDGNDYPACGALELEKKDFSSVKLSNSPDDMSISVNATQILRSLVVTAPEFSCADAEEDNDASEPSKGSPQEKPKQALSIDDALAAALAGFLTTTTVQSSNYTQTLTIKAP--EFTIEENGSD 572
HSP 2 Score: 53.5286 bits (127), Expect = 2.126e-4
Identity = 53/164 (32.32%), Postives = 80/164 (48.78%), Query Frame = 0
Query: 907 LGAKIKDGVGSKEKNLSPTSE----CDERGSGNDI------SSWLDFETPILEVKFTSQENTSSELSLKALLTNT-EADSQISFTQKSKDDEITTKENDLGSVVIEEGNPT----WES-----NNFLLVDLESYDAPVSSEDVAGHQV--PLDIKEHEVLPSLI 1048
LG + +DG + ++ + ++E ++G D+ S+ +DFE PILEVKF S N S++ L+ALLT+ E + Q Q+S D VVIE+ NP ES +N LLVDL+S+D + G ++ P E+ SLI
Sbjct: 704 LGNQTEDGSDALQEGAASSAEDIAVVSDKGILQDVLKSSCASAVVDFEIPILEVKFASSGNCSTKSPLEALLTDMPEFNVQAPCVQESDD------------VVIEQSNPIPVEDGESMGPLTDNHLLVDLDSFDVRDVPSTLEGEELQDPYTCSNQEMFGSLI 855
Match: A0A2R6RD37 ((Exosome complex component Rrp41 like {ECO:0000313|EMBL:PSS26470.1}))
HSP 1 Score: 374.785 bits (961), Expect = 4.578e-112
Identity = 237/523 (45.32%), Postives = 319/523 (60.99%), Query Frame = 0
Query: 13 GNRKTFSF--SSNWTIASGSFDDSVNFESSESPIDADGVDSADKAPLVLKPSESDSSPCEITLSLTQKHEIRQVYVRSTARTYEIYYKPDVHSSNEYLCTVRCSTASREDDSLHESNHGEGSTEPTKESDRDYKEKKSPSS----ANEDGWVEVKKPESPVEVIK--SMPKAIFGDE-RNLQDFYEATAEISDGEPSVTLIIRLLSLENKGLVYVDEIYVYADAVESADLDNYAAQNLQGGALAGSSLMTMFLPTLLQLTRSNVGQSQNGLNSRKVVEEESAERSRNIDSTNYSNEHYKRSKVLDRQDAEFQEVTEVTAQATP---QFKNLAPNVENPGQYHSV----VDCNNHVGRVMEQLNSRMSQIEDICLRFEEKMVRPISSMEERLQRLENQLETIVKNTQTSELHSCARFSAPAFSSLDSTSSSFYNDGCANPPHVQSEVEKHEPSCDDISKSTEENFKSGRAPQFIPSYVVTAPEFLCDEDDEQNDAVAPLKDSPGELPKKPMSIDDALAAALAGF 519
GN K++S+ S+NW I GS + SV FE+S+ PID + VD K+PL+LKP D PCEI +S QKHE+RQVYVRSTAR YEIY+ P + SSNEYLCTVRC A+R+D+ LH ++ E S + S + ++K +NEDGWVEVK P S ++ + SM K I G+ +QDFYEATAEI+D + V+L RLLSL++KG + +DEIYV+AD VES D+ Q Q G AG+S M M PTLLQL+++ + N + + + + ST+ S+ H + A Q V ++ ATP QF A + ++ SV V C +H+GR +EQL SR+ +IED CLRFEE M++PISSME RLQR+E Q+E +VKN Q + L C R SAP FS S SSS Y +G P Q E++K + C+ +S ++ S Q +P +VTAPEF C +D+E ND + P +D P E K+ +SIDDALAAALAGF
Sbjct: 33 GNNKSYSYRYSTNWAIDGGSLESSVTFETSDFPIDPETVDYKRKSPLILKPISDDCGPCEIKISFNQKHEVRQVYVRSTARVYEIYFAPSLQSSNEYLCTVRCGVAARDDEELHPTDTEEPSNARSNGSATELAKEKCNDDGTIISNEDGWVEVKVPYSSLQDNENYSMLKKIDGNPGTRVQDFYEATAEITDADACVSLTFRLLSLQSKGSLCIDEIYVFADVVES---DDSETQAPQVGNSAGNSFMAMLAPTLLQLSKTGI----NRIQDKHASDSREKGNCLEVGSTSTSSTHIANVVQQEESIAALQCV-KLPNDATPEPRQFHIPAQVSDKELRHESVSQTDVQC-DHIGRTLEQLVSRVGRIEDFCLRFEENMLKPISSMEARLQRVEQQMELLVKNLQYTGLPHCTRISAPVFSCSGSNSSSCY-EGSDYPACGQFELDKTDIPCNKVSNPPDDTSVSVNGNQVLPGLIVTAPEFSCGDDEENNDTLEPSEDCPPEQLKQALSIDDALAAALAGF 545
HSP 2 Score: 51.9878 bits (123), Expect = 6.320e-4
Identity = 49/131 (37.40%), Postives = 67/131 (51.15%), Query Frame = 0
Query: 922 LSPTSECDERGSGNDISSWLDFETPILEVKFTSQENTSSELSLKALLT-NTEADSQISFTQKSKDDEITTKENDLGSVVIEEGNPTWESNNFLLVDLESY---DAPVSSEDVAGHQVPLDIKEHEVLPSLI 1048
LSP++ C +DFE PIL+VKF S E +S L ALLT N E +++ TQ+ KDD + +++L + E N S+ LLVDLE Y + P S+E A Q E + PSLI
Sbjct: 742 LSPSASC-----------VVDFELPILDVKFASWETSSVRSPLDALLTDNPELEAEAPCTQQ-KDDAVVDGQSNLIPMEDGEANSPLTSDR-LLVDLECYERREVPSSAEGEA-IQDSYACNEQVMFPSLI 858
Match: A0A0V0IVL4 ((Putative ovule protein {ECO:0000313|EMBL:JAP36006.1}) (Fragment))
HSP 1 Score: 372.859 bits (956), Expect = 1.692e-111
Identity = 253/613 (41.27%), Postives = 354/613 (57.75%), Query Frame = 0
Query: 17 TFSFSSNWTIASGSFDDSVNFESSESPIDADGVDSADKAPLVLKPSESDSSPCEITLSLTQKHEIRQVYVRSTARTYEIYYKPDVHSSNEYLCTVRCSTASREDDSLHESNHGEGSTEPTKESDRDY----KEKKSPSSAN---EDGWVEVKKPESPVEVIKSMPKAIFGDE-RNLQDFYEATAEISDGEPSVTLIIRLLSLENKGLVYVDEIYVYADAVESADLDNYAAQNLQGGALAGSSLMTMFLPTLLQLTRSNVGQSQNGLN----SRKVVEEESAERSRNIDSTNYSNEHYKRSKVLDRQDAEFQEVTEVTAQ--ATPQFKNLAPNVENPGQYHSVVDCNNHV--GRV---MEQLNSRMSQIEDICLRFEEKMVRPISSMEERLQRLENQLETIVKNTQTSELHSCARFSAPAFSSLDSTSSSFYNDGCANPPHVQSEVEKHEPSCDDISKSTEENFKSGRAPQFIPSYVVTAPEFLCDEDDEQNDAVAPLKDSPGELPKKPMSIDDALAAALAGFSSLT-ISEPQKLSEKFTKSPNEEIGINEDSLDRPLEESIHRASNFHRDLLMKNPCTMNVDVEFINEETAGEEHLKYTQGLKFTAPDFASED 609
++S S+NWTI+ GS +DS+ FESS+SPID S +PLVL DS+PCEI L QKHEIRQVYVRSTAR YEIYY P + S NEYLCTVRCS A R+ + L ++N E T E DY E + + AN ED WVEVK P+ + + K G+E R+++D YEATAEISD +P ++L IR LSL NK + +DE+Y++ D ++S +++ AA ++ A SS M M +PTLLQL++S V Q Q + RK E A R+ + + NE KR A+ +VT + A P + + E + H+ +N GR+ +EQL R+S+IE+ICLRFEEKMV P++SME RLQRLE Q+ET+ KN+Q S + SC R +AP+F+ +S SSS YNDG E+EK +P C+ +S+ +++ S +P+ V++APEF C ED+E+ND V +K S E K+ +SIDDALAAAL+GF S + + P + + + S + G+NE + ES AS ++ + CT+ E ++ KYTQ L APDF E+
Sbjct: 20 SWSSSTNWTISRGSLEDSITFESSDSPID---TKSTQISPLVLHRPSPDSAPCEIKLCFMQKHEIRQVYVRSTARVYEIYYAPTLQSDNEYLCTVRCSIAERDGEFL-QANEIEVVTPQYLE---DYVGKPTEGRVTAEANCTREDDWVEVKVPDG--NGVSCLQKHTTGNEQRSIEDLYEATAEISDADPCMSLTIRFLSLPNKDSLCIDEVYIFGDPIDSNEVETPAAP-MENQA---SSFMAMLVPTLLQLSKSGVSQKQQEKDVSDSQRKENEVGIAVRTSDFADASKENEQEKR------MSADHTVQLDVTDKPVAKPTHSHPLIHQELSRENHNTSTTSNDASQGRIVGAIEQLLDRVSRIENICLRFEEKMVSPMNSMEMRLQRLEQQVETLAKNSQVSGVASCNRITAPSFTGSESNSSSLYNDGSEYRSCGVLELEKKDPPCNKLSEPSDDMPVSSNPSHVLPNLVISAPEFSCGEDEEENDIVESVKVSSQEKQKQVLSIDDALAAALSGFLSTSHVLPPDEGTLEVVASGSISEGVNEKN---EFSESTPSAS------VIAHNCTL--------EGKDNDKPSKYTQILAIAAPDFTEEE 596
HSP 2 Score: 38.891 bits (89), Expect = 6.580e+0
Identity = 18/33 (54.55%), Postives = 25/33 (75.76%), Query Frame = 0
Query: 939 SWLDFETPILEVKFTSQENTSSELSLKALLTNT 971
S LDF+ PIL+VKFT+ E+ S+ SL+ LL +T
Sbjct: 755 SALDFDIPILDVKFTANEDGDSKFSLEVLLGDT 787
Match: A0A2P6S7R1 ((Uncharacterized protein {ECO:0000313|EMBL:PRQ54689.1}))
HSP 1 Score: 370.548 bits (950), Expect = 6.953e-111
Identity = 231/541 (42.70%), Postives = 339/541 (62.66%), Query Frame = 0
Query: 17 TFSFSSNWTIASGSFDDSVNFESSESPIDADGVDSADKAPLVLKPSESDSSPCEITLSLTQKHEIRQVYVRSTARTYEIYYKPDVHSSNEYLCTVRCSTASREDDSLHESNHGEGSTEPTKESDRDYKEKKSPS----SANEDGWVEVKKPESPV--EVIKSMPKAIFGDERNLQDFYEATAEISDGEPSVTLIIRLLSLENKGLVYVDEIYVYADAVESADLDNYAAQNLQGGALAGSSLMTMFLPTLLQLTRS-NVGQSQNGLNSRKVVEEESAERSRNIDSTNYSNEHYK--RSKVLDRQDAEFQEVTEVTAQATPQFKNLAPNVENPGQYHSVVDCNNHVGRVMEQLNSRMSQIEDICLRFEEKMVRPISSMEERLQRLENQLETIVKNTQTSELHSCARFSAPAFSSLDSTSSSFYNDGCANPPHVQSEVEKHEPSCDDISKSTEENFKSGRAPQFIPSYVVTAPEFLCDEDDEQNDAVAPLKDSPGE-LPKKPMSIDDALAAALAGFSSLTISEPQKLSEKFT-KSP---NEEIG 543
++S ++NW++A+GS + V FESS SPID D ++S +PL+L P DS PCEIT++ TQKHE++Q+YVRSTAR YEIYY PD+ S NEYLCTVRC A+R+++ LH +++ E + + S +D E+ + S +ED WVEVK P+ + I S+P FG E Q YEATA++SD P ++L +RLLSLE K VYVDEIYV+AD +S DL+N A+ + AGSSLM MF+PTLLQL+++ +V +Q +S+K+ S+ DST+ + + + + D Q+ +F +V+ T +T ++ P +E P HV R M+ L SRM +IED+ LRFE+KMV+PISS+E RL+R+E QLE + K +Q S L +C+RF AP+FS ++S S+SFYN G P + + + + + + SG + +P VVTAPEF D+++E+ D + L P + P+ ++ID ALA+ALAGF SLT ++PQK ++ F+ ++P NEE G
Sbjct: 9 SWSSATNWSVAAGSLVNRVTFESSLSPIDGDALNSPAGSPLILHPPSPDSGPCEITINFTQKHEVQQIYVRSTARIYEIYYAPDLQSDNEYLCTVRCGIAARDEEVLHTADNEEVRSANSNGSPKDISEENLRNGNNLSTSEDDWVEVKVPDGHAVDKKISSLPFK-FGSE---QALYEATAQMSDVNPCISLTLRLLSLERKDCVYVDEIYVFADPADSVDLENQAS---TAESSAGSSLMAMFMPTLLQLSKTRSVNPTQQ--DSQKI-------GSKASDSTSVATKIQTDIKPSISDHQEVKFLDVSRDTFCST---QSQIP-LEVPVTESKSDTAYQHVERSMDLLFSRMGRIEDLLLRFEDKMVKPISSIEARLERVEQQLEVLSKQSQNSGLSTCSRFCAPSFSCVESDSNSFYNSGNDYPSCEAVILGNKDAQFEALPTTPYDMSDSGNPSKLVPGLVVTAPEFSSDDEEEEEDQSSSLVIHPSKNTPRPALTIDYALASALAGFMSLTSTQPQKCTQTFSVEAPEFLNEEDG 529
HSP 2 Score: 41.5874 bits (96), Expect = 1.145e+0
Identity = 34/96 (35.42%), Postives = 57/96 (59.38%), Query Frame = 0
Query: 938 SSWLDFETPILEVKFTSQENTSSELSLKALLTNT-EADSQISFTQKSKDDEITTKENDLGSVVIEEGNPTWES--NNFLLVDLESYDA--PVSSED 1028
SS +DFE P+L+VKFTS E+ S+ SL ALL+ + E+ ++ ++S D +E+ L +++E+ P + NF VD++ Y P+S+ D
Sbjct: 711 SSVVDFEIPVLDVKFTSLESCSATCSLAALLSESPESMTEAPCVRQSDDVPPVGEESSL--ILVEDREPVGPAPDGNF-SVDMDYYSVAEPLSTWD 803
Match: M1C7U2 ((Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400061638}))
HSP 1 Score: 371.318 bits (952), Expect = 7.665e-111
Identity = 251/613 (40.95%), Postives = 354/613 (57.75%), Query Frame = 0
Query: 17 TFSFSSNWTIASGSFDDSVNFESSESPIDADGVDSADKAPLVLKPSESDSSPCEITLSLTQKHEIRQVYVRSTARTYEIYYKPDVHSSNEYLCTVRCSTASREDDSLHESNHGEGSTEPTKESDRDY----KEKKSPSSAN---EDGWVEVKKPESPVEVIKSMPKAIFGDE-RNLQDFYEATAEISDGEPSVTLIIRLLSLENKGLVYVDEIYVYADAVESADLDNYAAQNLQGGALAGSSLMTMFLPTLLQLTRSNVGQSQNGLN----SRKVVEEESAERSRNIDSTNYSNEHYKRSKVLDRQDAEFQEVTEVTAQ--ATPQFKNLAPNVENPGQYHSVVDCNNHV--GRV---MEQLNSRMSQIEDICLRFEEKMVRPISSMEERLQRLENQLETIVKNTQTSELHSCARFSAPAFSSLDSTSSSFYNDGCANPPHVQSEVEKHEPSCDDISKSTEENFKSGRAPQFIPSYVVTAPEFLCDEDDEQNDAVAPLKDSPGELPKKPMSIDDALAAALAGFSSLT-ISEPQKLSEKFTKSPNEEIGINEDSLDRPLEESIHRASNFHRDLLMKNPCTMNVDVEFINEETAGEEHLKYTQGLKFTAPDFASED 609
++S S+NWTI+ GS +DS+ FESS+SPID S +PL+L DSSPCEI L QKHEIRQVYVRSTAR YEIYY P + S NEYLCTVRCS A R+ + L ++N E T E DY E + + AN ED WVEVK P+ + + K G+E R+++D YEATAEISD +P ++L IR LSL NK + +DE+Y++ D ++S +++ AA ++ A SS M M +PTLLQL++S V Q Q + RK E A R+ + + NE K R A+ +VT + A P + + + E + H+ +N GR+ +EQL R+S+IE+ICL+FEEKMV P++SME RLQRLE Q+ET+ KN+Q S + SC R +AP+F+ +S SSS YNDG E+EK +P C+ +S+ +++ +P+ V++APEF C ED+E+ND V +K S E K+ +SIDDALAAAL+GF S + + P + + + S + G+NE + ES AS ++ + CT+ E ++ KYTQ L APDF E+
Sbjct: 24 SWSSSTNWTISRGSLEDSITFESSDSPID---TKSTQISPLILHRPSPDSSPCEIKLCFMQKHEIRQVYVRSTARVYEIYYAPTLQSDNEYLCTVRCSIAERDGEFL-QANEIEVVTPQYLE---DYVGKPTEGRVTAEANCTREDDWVEVKVPDG--NGVSCLQKHTTGNEQRSIEDLYEATAEISDADPCMSLTIRFLSLPNKDSLCIDEVYIFGDPIDSNEVETPAAP-MENQA---SSFMAMLVPTLLQLSKSGVSQKQQEKDISDSQRKENEVGIAVRTSDFADASKENEQEK------RMSADHIVQLDVTDKPVAKPTYSHPLIHQELSRENHNTSTTSNDASQGRIVGAIEQLLDRVSRIENICLKFEEKMVSPMNSMEMRLQRLEQQVETLAKNSQFSGVASCNRITAPSFTGSESNSSSLYNDGSEYRSCGVLELEKKDPPCNKLSEPSDDMPVLSNPSHVLPNLVISAPEFSCGEDEEENDIVESVKVSSQEKQKQVLSIDDALAAALSGFLSTSHVLPPDEGTLEVVASGSISEGVNEKN---EFSESTQSAS------VIAHNCTL--------EGKDNDKPSKYTQILAIAAPDFTEEE 600
HSP 2 Score: 42.743 bits (99), Expect = 5.034e-1
Identity = 36/110 (32.73%), Postives = 57/110 (51.82%), Query Frame = 0
Query: 939 SWLDFETPILEVKFTSQENTSSELSLKALLTNTEADSQISFTQKSKDDEITTKENDLGSVVIEEGNPTWESNNFLLVDLESYDAPVSSEDVAGHQVPLDIKEHEVLPSLI 1048
S LDF+ PIL+VKFT+ E++ S+ SL+ LL +T D + +S D+ +T++ + EE + ++ LVD Y A + + GH P EV+ LI
Sbjct: 759 SALDFDIPILDVKFTANEDSYSKFSLEVLLGDT-TDVNV---DESTDNAVTSEGTTSTDMDDEESLKCFAGDSNTLVDFGCYAADTFT-NSDGHSNPSISSNREVVIGLI 863
Match: A0A6N2BH22 ((Uncharacterized protein {ECO:0000313|EMBL:TMW94107.1}))
HSP 1 Score: 368.622 bits (945), Expect = 4.937e-110
Identity = 252/607 (41.52%), Postives = 350/607 (57.66%), Query Frame = 0
Query: 17 TFSFSSNWTIASGSFDDSVNFESSESPIDADGVDSADKAPLVLKPSESDSSPCEITLSLTQKHEIRQVYVRSTARTYEIYYKPDVHSSNEYLCTVRCSTASREDDSLHESNHGEGSTEPTKESDRDY----KEKKSPSSAN---EDGWVEVKKPESPVEVIKSMPKAIFGDE-RNLQDFYEATAEISDGEPSVTLIIRLLSLENKGLVYVDEIYVYADAVESADLDNYAAQNLQGGALAGSSLMTMFLPTLLQLTRSNVGQSQNGLN----SRKVVEEESAERSRNIDSTNYSNEHYKRSKVLDRQDAEFQEVTEVTAQ--ATPQFKNLAPNVENPGQYHSVVDCNNHV--GRV---MEQLNSRMSQIEDICLRFEEKMVRPISSMEERLQRLENQLETIVKNTQTSELHSCARFSAPAFSSLDSTSSSFYNDGCANPPHVQSEVEKHEPSCDDISKSTEENFKSGRAPQFIPSYVVTAPEFLCDEDDEQNDAVAPLKDSPGELPKKPMSIDDALAAALAGFSSLT-ISEPQKLSEKFTKSPNEEIGINEDSLDRPLEESIHRASNFHRDLLMKNPCTMNVDVEFINEETAGEEHLKYTQGLKFTAP 603
++S S+NWTI+ GS +DS+ FESS+SPIDA+ S +PL+L DSSPCEI L QKHEIRQVYVRSTAR YEIYY P + S NEYLCTVRCS A R+ + L ++N E T E DY E + + AN ED WVEVK P+ + + K G E R+++D YEATAEISD +P ++L IR LSL NK + +DE+Y++ D V+S ++D AA ++ A SS M M +PTLLQL++S V Q Q + RK E A R+ + N NE K + A+ +VT + A P N + E + H+ +N GR+ +EQL R+S+IE+ICLRFEEKMV P++SME RLQRLE Q+ET+ K++Q S + SC R +AP+F+ +S SSS YNDG E+EK +P C+ +S+ +++ S +P+ V++AP+F C ED+E+ND V +K S E K+ +SIDDALAAAL+GF S + + P + + + S + G+NE + ES AS + + CT+ E ++ KYTQ L AP
Sbjct: 24 SWSSSTNWTISRGSLEDSITFESSDSPIDAE---STQISPLILHRPSPDSSPCEIKLCFMQKHEIRQVYVRSTARVYEIYYAPTLQSDNEYLCTVRCSIAERDGEFL-QANEIEVVTPQCLE---DYVGKPTEGRVAAEANCTREDDWVEVKVPDG--NGVSCLQKHTTGKEQRSIEDLYEATAEISDADPCMSLTIRFLSLPNKDSLCIDEVYIFGDPVDSNEVDTPAAP-MENQA---SSFMAMLVPTLLQLSKSGVSQKQQEKDVSDSQRKENEVGIAVRASDFSDANKENEQEK------KMSADHIVQLDVTDKPVAKPTHSNPLIHQELSRENHNTSTTSNDASQGRIVGAIEQLLDRVSRIENICLRFEEKMVIPMNSMEMRLQRLEQQVETLAKSSQFSGVASCNRITAPSFTGSESNSSSLYNDGSEYRSCGVLELEKKDPPCNKLSEPSDDIPVSSNPSHVLPNLVISAPDFSCGEDEEENDIVESVKVSSQEKQKQVLSIDDALAAALSGFLSTSHVLPPDEGTLEVIASGSISEGVNEKN---EFSESTPSAS------VTTHNCTL--------EGNDNDKPSKYTQILAIAAP 594
HSP 2 Score: 47.3654 bits (111), Expect = 1.902e-2
Identity = 47/141 (33.33%), Postives = 69/141 (48.94%), Query Frame = 0
Query: 921 NLSPTSECDER----GSGNDI---------SSWLDFETPILEVKFTSQENTSSELSLKALLTNTEADSQISFTQKSKDDEITTKENDLGSVVIEEGNPTWESNNFLLVDLESYDAPVSSEDVAGHQVPLDIKEHEVLPSLI 1048
NL T+E +ER GS D+ S LDF+ PIL+VKFT+ E+ S+ SL+ LL +T D + +S D+ +T + + EE + ++ LVD Y A + + GH P HEV+ SLI
Sbjct: 711 NLGNTAESEERDPSKGSHLDVMQNVCEYLRPSALDFDIPILDVKFTANEDGDSKFSLEVLLGDT-TDINV---DESTDNAVTNEGTTTTDMNDEESLKCFAGDSNTLVDFGFYAADTFT-NSDGHSNPSISSNHEVVISLI 846
Match: A0A7J0EWY6 ((Uncharacterized protein {ECO:0000313|EMBL:GFY90469.1}))
HSP 1 Score: 367.851 bits (943), Expect = 9.508e-110
Identity = 234/525 (44.57%), Postives = 324/525 (61.71%), Query Frame = 0
Query: 13 GNRKTFSF--SSNWTIASGSFDDSVNFESSESPIDADGVDSADKAPLVLKPSESDSSPCEITLSLTQKHEIRQVYVRSTARTYEIYYKPDVHSSNEYLCTVRCSTASREDDSLHESNHGEGSTEPTKESDRDYKEKKSPSS----ANEDGWVEVKKPESPVEVIK--SMPKAIFGDE-RNLQDFYEATAEISDGEPSVTLIIRLLSLENKGLVYVDEIYVYADAVESADLDNYAAQNLQGGALAGSSLMTMFLPTLLQLTRSNVGQSQNGLNSRKVVEEESAERSRNIDSTNYSNEHYKRSKVLDRQD--AEFQEVTEVTAQATPQFKNLAPNVENPGQ---YHSV----VDCNNHVGRVMEQLNSRMSQIEDICLRFEEKMVRPISSMEERLQRLENQLETIVKNTQTSELHSCARFSAPAFSSLDSTSSSFYNDGCANPPHVQSEVEKHEPSCDDISKSTEENFKSGRAPQFIPSYVVTAPEFLCDEDDEQNDAVAPLKDSPGELPKKPMSIDDALAAALAGF 519
GN K++S+ S+NW I GS + SV FE+S+ PID + VD K+PL+LKP+ D PCEI +S QKHE+RQVYVRSTAR YEIY+ + SSNEYLCTVRC A+R+D+ H ++ E S + S ++K +NEDGWVEVK P S ++ + SM K I G+ +QDFYEATAEI+D + V+L RLLSL++KG + +DEIYV+AD VES D+ Q Q G AG+S M M PTLLQL+++ + + Q+ S +S E+ ++ + S + V+ +++ A Q V ++ ATP+ + + G+ + SV V C +H+GR +EQL SR+ +IED CLRFEE M++PISSME RLQR+E Q+E +VKN+Q + L C R SAP FS S SSS Y +G P Q E++K + C+ +S ++ S Q +P +VTAPEF C +D+E ND + P +D P E K+ +SIDDALAAALAGF
Sbjct: 12 GNNKSYSYRYSTNWAIDGGSLESSVTFEASDFPIDPETVDYKRKSPLILKPTSDDCGPCEIKISFNQKHEVRQVYVRSTARVYEIYFARSLQSSNEYLCTVRCGVAARDDEEPHPTDTEEPSNARSNGSATGLAKEKCNDDGTIISNEDGWVEVKVPYSLLQENENYSMLKKIDGNPGTRVQDFYEATAEITDADACVSLTFRLLSLQSKGSLCIDEIYVFADVVES---DDSETQAPQVGNYAGNSFMAMLAPTLLQLSKTGINRIQDKHAS------DSREKGNCLEVGSMSTSSTHIANVVQQEESIAALQCV-KLPNDATPEPRQFHIPAQVSGKELRHESVSQTDVQC-DHIGRTLEQLVSRVGRIEDFCLRFEENMLKPISSMEARLQRVEQQVELLVKNSQYTGLPHCTRISAPVFSCSGSNSSSCY-EGSDYPACGQFELDKTDIPCNKVSNPPDDTSVSVNGNQVLPGLIVTAPEFSCGDDEENNDTLEPSEDCPPEQLKQALSIDDALAAALAGF 524
HSP 2 Score: 56.225 bits (134), Expect = 3.087e-5
Identity = 51/131 (38.93%), Postives = 68/131 (51.91%), Query Frame = 0
Query: 922 LSPTSECDERGSGNDISSWLDFETPILEVKFTSQENTSSELSLKALLT-NTEADSQISFTQKSKDDEITTKENDLGSVVIEEGNPTWESNNFLLVDLESY---DAPVSSEDVAGHQVPLDIKEHEVLPSLI 1048
LSP++ C +DFE PIL+VKF S E +S L ALLT N E +++ TQ+ KDD + +++L + E N T S+ LLVDLE Y D P S+E A Q E + PSLI
Sbjct: 721 LSPSASC-----------VVDFELPILDVKFASWETSSVRSPLDALLTDNPEFEAEAPCTQQ-KDDAVVDGQSNLIPMEDGEANSTLTSDR-LLVDLECYERRDVPSSAEGEA-IQDSYACNEQVMFPSLI 837
Match: A0A6J1A1H4 ((uncharacterized protein LOC110413825 {ECO:0000313|RefSeq:XP_021280479.1}))
HSP 1 Score: 365.54 bits (937), Expect = 4.301e-109
Identity = 244/581 (42.00%), Postives = 338/581 (58.18%), Query Frame = 0
Query: 17 TFSFSSNWTIASGSFDDSVNFESSESPI-----------DADGVDSADKAPLVLKPSESDSS-PCEITLSLTQKHEIRQVYVRSTARTYEIYYKPDVHSSNEYLCTVRCSTASREDDSLHESNHGEGSTEPTKESDRDYKEKK----SPSSANEDGWVEVKKPESPVEVIKSMPKAIFGDERNLQDFYEATAEISDGEPSVTLIIRLLSLENKGLVYVDEIYVYADAVESADLDNYAAQNLQGGALAGSSLMTMFLPTLLQLTRSNVGQSQNGLNSRKVVEEESAERS--RNIDSTNYSNE--HYKRSKVLDRQDAEFQEVTEVTAQATPQFKNLAPNVENPGQYHSVVDCNNHVGRVMEQLNSRMSQIEDICLRFEEKMVRPISSMEERLQRLENQLETIVKNTQTSELHSCARFSAPAFSSLDSTSSSFYNDGCANPPHVQSEVEKHEPSCDDISKSTEENFKSG----------RAPQFIPSYVVTAPEFLCDEDDEQNDAVAPLKDSPGELPKKPMSIDDALAAALAGFSSLTISEPQKLSEKF-TKSP---NEEIGINEDSLDRPLEESIHRASNF 563
++S S+NW+IA GS SV FESS SPI D V S K+PL+L P+ DS+ PCEIT++ QKHE+RQVYVRSTAR YEIY P SNEYL TVRC ASR+++ LH +N E + KE++++ EK+ S S++NED WVEVK P++PV S + F + QD YEATAEI+D P +++ +RLLSL+NKG V VDE+YV+ D VES D +N Q G AGSSLM M PTLLQL+++ + +S E E + + + I+ N +N+ R + ++Q++ + + PQ K+ E G + C H+ + +E L SR+S++ED +FEE M++PISS++ RLQR+E QLE + K + SEL SC R+SAP FS DS + + YN G +E SC+D+ +S E++F S A Q PS VVTAPEF + DDE++D + + DSP + PK+ MSIDDALA+ALA F S T EPQK ++ K+P NEE G S+D+ + R S+F
Sbjct: 10 SWSSSTNWSIAGGSLPSSVTFESSFSPITDSDEHEHDIHDPSAVGSTPKSPLILCPTSPDSTTPCEITIAFAQKHEVRQVYVRSTARVYEIYNAPKHQGSNEYLFTVRCGIASRDEEVLHAANPDEAALAHLKEANKESDEKRLKNDSSSNSNEDDWVEVKAPDTPVLDSGSSVPSNFS--VSSQDLYEATAEINDTNPCMSITLRLLSLQNKGCVCVDELYVFGDPVESDDSENEVG---QMGNAAGSSLMAMLAPTLLQLSKTAGLRHIQNEDSFGTKENEKTQENGPKTIEPLNCANKIPQEGRPSLANQQESIASTIELNRHEIPPQLKDR----EAKGD----LSC-GHIEKFLEHLVSRVSRVEDFLSKFEENMLKPISSIDSRLQRVEQQLEELTKKPKNSELPSCTRYSAPEFSCHDSDNYTPYNIG-------------NESSCEDLCESREKDFSSSLRCDEIIYSVNATQSFPSLVVTAPEF-SNADDEEDDHASKI-DSPKDKPKQTMSIDDALASALASFLSSTSIEPQKYTQALAVKAPDFSNEEDG----SIDK----KVSRKSHF 553
HSP 2 Score: 47.7506 bits (112), Expect = 1.343e-2
Identity = 41/130 (31.54%), Postives = 66/130 (50.77%), Query Frame = 0
Query: 879 DDYWATGEIGMLESSSSN----ILDRIKIIEQ-LGAKIKDGVGSKEKNLSPTSECDERGSGNDI--------------SSWLDFETPILEVKFTSQENTSSELSLKALLTNTE----ADSQISFTQKSKD 985
D + G++G E SS +LD I+ Q L + DG G+ E+ + ++E + + SS +DFE+PIL+VKFTSQ+N++ + L+ALL +T D+ S ++KS D
Sbjct: 627 DLHQIAGDVGNGEVSSGTNKTLVLDEADILNQFLENHVDDGSGADEEGVPGSTEIKAEVTKQGLHEEFLQNVLELSYSSSVVDFESPILDVKFTSQDNSNDKSPLEALLFDTSDMPFTDNGASCSKKSDD 756
Match: A0A6P5TP73 ((uncharacterized protein LOC110769229 {ECO:0000313|RefSeq:XP_021828860.1}))
HSP 1 Score: 362.073 bits (928), Expect = 1.257e-107
Identity = 238/554 (42.96%), Postives = 340/554 (61.37%), Query Frame = 0
Query: 17 TFSFSSNWTIASGSFDDSVNFESSESPIDADGVDSADKAPLVLKPSESDSSPCEITLSLTQKHEIRQVYVRSTARTYEIYYKPDVHSSNEYLCTVRCSTASREDDSLHESNHGEGSTEPTKESDRDYKEKKSPS----SANEDGWVEVKKPESPV--EVIKSMPKAIFGDERNLQDFYEATAEISDGEPSVTLIIRLLSLENKGLVYVDEIYVYADAVESADLDNYAAQNLQGGALAGSSLMTMFLPTLLQLTR-SNVGQSQNGLNSRKVVEEESAE-RSRNIDSTNYSNEHYKRSK--VLDRQDAEFQEVTEVT-AQATPQFKNLAPNVENPGQYHSVVDCNNHVGRVMEQLNSRMSQIEDICLRFEEKMVRPISSMEERLQRLENQLETIVKNTQTSELHSCARFSAPAFSSLDSTSSSFYNDGCANPPHVQSEVEKHEPSCDDISKSTEENFKSGRAPQFIPSYVVTAPEF---LCDEDDEQNDAVAPLKDSPGE-LPKKPMSIDDALAAALAGFSSLTISEPQKLSEKFT-KSP---NEEIGINEDSLDR 551
++S ++NW IA GS + V+FESS SPID + + S ++ L+L P DS PCEIT++ TQKHEI+QVYVRSTAR YEIYY PD+ S NEYLCTVRC A R+++ LH ++ E + + S +D E+ S + + +ED W+EVK P++ V IKS+P + + Q FYEATA+ISD P V+L +RLLSLE K V VDE+YV+AD V+SAD +N Q + AGSSLM M +PTLLQ ++ S ++Q+ NS ++ S E S+ + ST+ + + + K + D Q+ + Q+V T A Q L P E+ +HV R + QL SRM +IED+ LRFEE M++PISS+E RL+R+E QLE + + +Q S L +C+RF AP+FS ++S S+SFYN G E K++ D + +T + +P PS VVTAPEF +E++E+ D + + +P E P+ ++IDDALA+ALAGF SLT ++PQK ++ + K+P NEE G S+DR
Sbjct: 16 SWSSAANWNIAGGSLVNCVSFESSFSPIDDETLKSTSESSLILHPPSPDSVPCEITINFTQKHEIQQVYVRSTARVYEIYYAPDLQSGNEYLCTVRCGIADRDEEVLHTGDNEEVRSTNSNGSLKDPSEENSRNGNGLNTSEDDWIEVKVPDTHVLDNKIKSLPLKL----GSAQAFYEATAQISDASPCVSLTLRLLSLERKDCVCVDEVYVFADPVDSADSEN---QVSAVESSAGSSLMAMLVPTLLQFSKTSGAHRTQDRGNSDTWEKQNSLEIGSQTVGSTSAATKIQEEGKASIPDHQEVKVQDVNRATVGTAQLQTPPLVPFRESKPDSPPY----SHVERAVNQLCSRMGRIEDLFLRFEENMLKPISSIEARLERVEQQLEVLTRKSQNSGLPTCSRFCAPSFSCIESESNSFYNSGNDYRRWEAFESGKNDVQLDAL-PTTPYDMSGSNSPHLFPSLVVTAPEFSNGDDEEEEEEEDHESDVVVTPSENKPRPALTIDDALASALAGFMSLTSTQPQKYTQTLSVKAPDFLNEEDG----SVDR 553
| Match Name | Stats | Description |
|---|---|---|
| A0A061E360 | E-Value: 3.374e-113, PID: 42.25 | (Uncharacterized protein {ECO:0000313|EMBL:EOX9666... [more] |
| A0A5B6ZBJ1 | E-Value: 3.808e-113, PID: 45.26 | (Uncharacterized protein {ECO:0000313|EMBL:MPA4115... [more] |
| A0A2R6RD37 | E-Value: 4.578e-112, PID: 45.32 | (Exosome complex component Rrp41 like {ECO:0000313... [more] |
| A0A0V0IVL4 | E-Value: 1.692e-111, PID: 41.27 | (Putative ovule protein {ECO:0000313|EMBL:JAP36006... [more] |
| A0A2P6S7R1 | E-Value: 6.953e-111, PID: 42.70 | (Uncharacterized protein {ECO:0000313|EMBL:PRQ5468... [more] |
| M1C7U2 | E-Value: 7.665e-111, PID: 40.95 | (Uncharacterized protein {ECO:0000313|EnsemblPlant... [more] |
| A0A6N2BH22 | E-Value: 4.937e-110, PID: 41.52 | (Uncharacterized protein {ECO:0000313|EMBL:TMW9410... [more] |
| A0A7J0EWY6 | E-Value: 9.508e-110, PID: 44.57 | (Uncharacterized protein {ECO:0000313|EMBL:GFY9046... [more] |
| A0A6J1A1H4 | E-Value: 4.301e-109, PID: 42.00 | (uncharacterized protein LOC110413825 {ECO:0000313... [more] |
| A0A6P5TP73 | E-Value: 1.257e-107, PID: 42.96 | (uncharacterized protein LOC110769229 {ECO:0000313... [more] |
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |
