Resource Type:
Genetic Marker
Name:
MK004138 K1582
Identifier:
MK004138_K1582
Organism:
Marker Type:
SNP
Publication:
- Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
- Cavagnaro PF, Iorizzo M, Yildiz M, Senalik D, Parsons J, Ellison S, Simon PW. A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.. BMC genomics. 2014 Dec 16; 15:1118.
Relationship:
| Relationships |
|---|
| The genetic_marker, MK004138 K1582, is adjacent to primer, K1582_X. |
| The genetic_marker, MK004138 K1582, is adjacent to primer, K1582_Y. |
| The genetic_marker, MK004138 K1582, is adjacent to primer, K1582_Common. |
| The genetic_marker, MK004138 K1582, is located in gene, DCAR_016172. |
| The genetic_marker, MK004138 K1582, is located in gene, LOC108220475. |
| The marker_locus, K1582, is an instance of genetic_marker, MK004138 K1582. |
MapViewer Marker Map Positions:
Synonyms:
- MK004138
Sequence Coordinates:
DCARv2_Chr5:922716..922774-
View location in JBrowse:
Sequence:
AAGCTTGATCCCAGCCCAGAATTGCTCTGATTCTGCGRAAAATCCCCCAA
TTGCAAACTAGGTGATCCACT
Sequences:
>MK004138_K1582 ID=MK004138_K1582; Name=MK004138 K1582; organism=Daucus carota; type=genetic_marker
AAGCTTGATCCCAGCCCAGAATTGCTCTGATTCTGCGRAAAATCCCCCAA
TTGCAAACTAGGTGATCCACT
This is the primary representative sequence for this feature.
Sequence Length:
71
Five Prime Flanking Region:
AAGCTTGATCCCAGCCCAGAATTGCTCTGATTCTGCG
Three Prime Flanking Region:
AAAATCCCCCAATTGCAAACTAGGTGATCCACT
SNP:
A/G