MK003466 K0910

Resource Type: 
Genetic Marker
Name: 
MK003466 K0910
Identifier: 
MK003466_K0910
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Cavagnaro PF, Iorizzo M, Yildiz M, Senalik D, Parsons J, Ellison S, Simon PW. A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.. BMC genomics. 2014 Dec 16; 15:1118.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK003466 K0910, is adjacent to primer, K0910_X.
The genetic_marker, MK003466 K0910, is adjacent to primer, K0910_Y.
The genetic_marker, MK003466 K0910, is adjacent to primer, K0910_Common.
The genetic_marker, MK003466 K0910, is located in gene, DCAR_021922.
The genetic_marker, MK003466 K0910, is located in gene, LOC108224792.
The marker_locus, K0910, is an instance of genetic_marker, MK003466 K0910.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG bin mapCH650.234K0910MapViewer
2016 70796 NG full mapChr648.914K0910MapViewer
2016 70349 NG full mapChr643.648K0910MapViewer
2016 Integ NG full mapCH653.91K0910MapViewer
2014 70349Chromosome_643.648K0910MapViewer
Synonyms: 
  • MK003466
Sequence Coordinates: 
DCARv2_Chr6:18449174..18449221+
View location in JBrowse: 
DCARv2_Chr6:18449174..18449221+
Sequence: 
GCCTCCGCCATGCTTCCCGTTCCGAAGGAGAACCCCTYGTTTCTCTCCGC
ATTGTTGGCCCTACATCTCTA
Sequences: 
>MK003466_K0910 ID=MK003466_K0910; Name=MK003466 K0910; organism=Daucus carota; type=genetic_marker
GCCTCCGCCATGCTTCCCGTTCCGAAGGAGAACCCCTYGTTTCTCTCCGC
ATTGTTGGCCCTACATCTCTA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GCCTCCGCCATGCTTCCCGTTCCGAAGGAGAACCCCT
Three Prime Flanking Region: 
GTTTCTCTCCGCATTGTTGGCCCTACATCTCTA
SNP: 
C/T