MK002837 K0281

Resource Type: 
Genetic Marker
Name: 
MK002837 K0281
Identifier: 
MK002837_K0281
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Cavagnaro PF, Iorizzo M, Yildiz M, Senalik D, Parsons J, Ellison S, Simon PW. A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.. BMC genomics. 2014 Dec 16; 15:1118.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK002837 K0281, is adjacent to primer, K0281_X.
The genetic_marker, MK002837 K0281, is adjacent to primer, K0281_Y.
The genetic_marker, MK002837 K0281, is adjacent to primer, K0281_Common.
The genetic_marker, MK002837 K0281, is located in gene, DCAR_021580.
The genetic_marker, MK002837 K0281, is located in gene, LOC108225241.
The marker_locus, K0281, is an instance of genetic_marker, MK002837 K0281.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2014 70349Chromosome_646.842K0281MapViewer
2016 70349 NG full mapChr646.842K0281MapViewer
2016 80592 NG full mapChr68.969K0281MapViewer
2016 70796 NG full mapChr650.786K0281MapViewer
2016 Integ NG full mapCH656.537K0281MapViewer
Synonyms: 
  • MK002837
Sequence Coordinates: 
DCARv2_Chr6:21699635..21699688-
View location in JBrowse: 
DCARv2_Chr6:21699635..21699688-
Sequence: 
TATTCTTACTCGAATTCCAGGAAAGAATCAATCCAGAWGGATACAATTCC
AACCTTATGGGGCATTTTCAG
Sequences: 
>MK002837_K0281 ID=MK002837_K0281; Name=MK002837 K0281; organism=Daucus carota; type=genetic_marker
TATTCTTACTCGAATTCCAGGAAAGAATCAATCCAGAWGGATACAATTCC
AACCTTATGGGGCATTTTCAG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TATTCTTACTCGAATTCCAGGAAAGAATCAATCCAGA
Three Prime Flanking Region: 
GGATACAATTCCAACCTTATGGGGCATTTTCAG
SNP: 
A/T