MK002686 K0130

Resource Type: 
Genetic Marker
Name: 
MK002686 K0130
Identifier: 
MK002686_K0130
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK002686 K0130, is adjacent to primer, K0130_X.
The genetic_marker, MK002686 K0130, is adjacent to primer, K0130_Y.
The genetic_marker, MK002686 K0130, is adjacent to primer, K0130_Common.
The genetic_marker, MK002686 K0130, is located in gene, DCAR_018962.
The genetic_marker, MK002686 K0130, is located in gene, LOC108223079.
The marker_locus, K0130, is an instance of genetic_marker, MK002686 K0130.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 80592 NG full mapChr538.865K0130MapViewer
2016 Integ NG full mapCH553.179K0130MapViewer
2016 70796 NG full mapChr513.241K0130MapViewer
Synonyms: 
  • MK002686
Sequence Coordinates: 
DCARv2_Chr5:34826271..34826326+
View location in JBrowse: 
DCARv2_Chr5:34826271..34826326+
Sequence: 
AGAAATTTTCATGGAAGGTAATGTGAATTGAATGTCAKCCTTTTGCGGCA
TTGTTTCACAAGGGATTTTGA
Sequences: 
>MK002686_K0130 ID=MK002686_K0130; Name=MK002686 K0130; organism=Daucus carota; type=genetic_marker
AGAAATTTTCATGGAAGGTAATGTGAATTGAATGTCAKCCTTTTGCGGCA
TTGTTTCACAAGGGATTTTGA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AGAAATTTTCATGGAAGGTAATGTGAATTGAATGTCA
Three Prime Flanking Region: 
CCTTTTGCGGCATTGTTTCACAAGGGATTTTGA
SNP: 
G/T