MK003961 K1405

Resource Type: 
Genetic Marker
Name: 
MK003961 K1405
Identifier: 
MK003961_K1405
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK003961 K1405, is adjacent to primer, K1405_X.
The genetic_marker, MK003961 K1405, is adjacent to primer, K1405_Y.
The genetic_marker, MK003961 K1405, is adjacent to primer, K1405_Common.
The genetic_marker, MK003961 K1405, is located in gene, DCAR_016572.
The genetic_marker, MK003961 K1405, is located in gene, LOC108224090.
The marker_locus, K1405, is an instance of genetic_marker, MK003961 K1405.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH516.226K1405MapViewer
2016 70796 NG full mapChr561.618K1405MapViewer
2016 80592 NG full mapChr510.056K1405MapViewer
Synonyms: 
  • MK003961
Sequence Coordinates: 
DCARv2_Chr5:4807158..4807211+
View location in JBrowse: 
DCARv2_Chr5:4807158..4807211+
Sequence: 
TTCTTCCTGGYGGGTTCGATGCAAAATCTTGTCTCAGYAGGCACCATTCC
GGATCTTATCGTAAAGAATCA
Sequences: 
>MK003961_K1405 ID=MK003961_K1405; Name=MK003961 K1405; organism=Daucus carota; type=genetic_marker
TTCTTCCTGGYGGGTTCGATGCAAAATCTTGTCTCAGYAGGCACCATTCC
GGATCTTATCGTAAAGAATCA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TTCTTCCTGGYGGGTTCGATGCAAAATCTTGTCTCAG
Three Prime Flanking Region: 
AGGCACCATTCCGGATCTTATCGTAAAGAATCA
SNP: 
C/T