MK004002 K1446

Resource Type: 
Genetic Marker
Name: 
MK004002 K1446
Identifier: 
MK004002_K1446
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004002 K1446, is adjacent to primer, K1446_X.
The genetic_marker, MK004002 K1446, is adjacent to primer, K1446_Y.
The genetic_marker, MK004002 K1446, is adjacent to primer, K1446_Common.
The genetic_marker, MK004002 K1446, is located in gene, DCAR_021244.
The genetic_marker, MK004002 K1446, is located in gene, LOC108227988.
The marker_locus, K1446, is an instance of genetic_marker, MK004002 K1446.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH657.966K1446MapViewer
2016 70796 NG full mapChr652.27K1446MapViewer
Synonyms: 
  • MK004002
Sequence Coordinates: 
DCARv2_Chr6:24744644..24744696+
View location in JBrowse: 
DCARv2_Chr6:24744644..24744696+
Sequence: 
CCACTTCCTTGACCACATTTCTCTGTTTCATTCCTTTYCTTATCTCTGTA
ACATGATCCCACTGACTCTTY
Sequences: 
>MK004002_K1446 ID=MK004002_K1446; Name=MK004002 K1446; organism=Daucus carota; type=genetic_marker
CCACTTCCTTGACCACATTTCTCTGTTTCATTCCTTTYCTTATCTCTGTA
ACATGATCCCACTGACTCTTY
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CCACTTCCTTGACCACATTTCTCTGTTTCATTCCTTT
Three Prime Flanking Region: 
CTTATCTCTGTAACATGATCCCACTGACTCTTY
SNP: 
C/T