MK004168 K1612

Resource Type: 
Genetic Marker
Name: 
MK004168 K1612
Identifier: 
MK004168_K1612
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004168 K1612, is adjacent to primer, K1612_X.
The genetic_marker, MK004168 K1612, is adjacent to primer, K1612_Y.
The genetic_marker, MK004168 K1612, is adjacent to primer, K1612_Common.
The genetic_marker, MK004168 K1612, is located in gene, DCAR_016845.
The genetic_marker, MK004168 K1612, is located in gene, LOC108223638.
The marker_locus, K1612, is an instance of genetic_marker, MK004168 K1612.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH521.038K1612MapViewer
2016 70796 NG full mapChr553.449K1612MapViewer
Synonyms: 
  • MK004168
Sequence Coordinates: 
DCARv2_Chr5:8278106..8278153-
View location in JBrowse: 
DCARv2_Chr5:8278106..8278153-
Sequence: 
ATGTGAAGAGGACTTATCCCGAGTTGGATTTGATTGGYGGGAATGTGGTG
ACGATGGCACAGGCACAGAAT
Sequences: 
>MK004168_K1612 ID=MK004168_K1612; Name=MK004168 K1612; organism=Daucus carota; type=genetic_marker
ATGTGAAGAGGACTTATCCCGAGTTGGATTTGATTGGYGGGAATGTGGTG
ACGATGGCACAGGCACAGAAT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
ATGTGAAGAGGACTTATCCCGAGTTGGATTTGATTGG
Three Prime Flanking Region: 
GGGAATGTGGTGACGATGGCACAGGCACAGAAT
SNP: 
C/T