MK004344 K1788

Resource Type: 
Genetic Marker
Name: 
MK004344 K1788
Identifier: 
MK004344_K1788
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004344 K1788, is adjacent to primer, K1788_X.
The genetic_marker, MK004344 K1788, is adjacent to primer, K1788_Y.
The genetic_marker, MK004344 K1788, is adjacent to primer, K1788_Common.
The genetic_marker, MK004344 K1788, is located in gene, DCAR_019107.
The genetic_marker, MK004344 K1788, is located in gene, LOC108223355.
The marker_locus, K1788, is an instance of genetic_marker, MK004344 K1788.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 80592 NG full mapChr541.134K1788MapViewer
2016 Integ NG bin mapCH553.479K1788MapViewer
2016 Integ NG full mapCH555.253K1788MapViewer
2016 70796 NG full mapChr511.652K1788MapViewer
Synonyms: 
  • MK004344
Sequence Coordinates: 
DCARv2_Chr5:36366426..36366475+
View location in JBrowse: 
DCARv2_Chr5:36366426..36366475+
Sequence: 
GTGACGAGGTTTTTGTCTGGCCATGGCTGGGAATTGTKGTTAACATTCCA
ACTGAATTTAAGGATGGACGG
Sequences: 
>MK004344_K1788 ID=MK004344_K1788; Name=MK004344 K1788; organism=Daucus carota; type=genetic_marker
GTGACGAGGTTTTTGTCTGGCCATGGCTGGGAATTGTKGTTAACATTCCA
ACTGAATTTAAGGATGGACGG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GTGACGAGGTTTTTGTCTGGCCATGGCTGGGAATTGT
Three Prime Flanking Region: 
GTTAACATTCCAACTGAATTTAAGGATGGACGG
SNP: 
G/T