MK004356 K1800

Resource Type: 
Genetic Marker
Name: 
MK004356 K1800
Identifier: 
MK004356_K1800
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004356 K1800, is adjacent to primer, K1800_X.
The genetic_marker, MK004356 K1800, is adjacent to primer, K1800_Y.
The genetic_marker, MK004356 K1800, is adjacent to primer, K1800_Common.
The genetic_marker, MK004356 K1800, is located in gene, DCAR_021986.
The genetic_marker, MK004356 K1800, is located in gene, LOC108225755.
The marker_locus, K1800, is an instance of genetic_marker, MK004356 K1800.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH654.54K1800MapViewer
2016 70796 NG full mapChr648.914K1800MapViewer
Synonyms: 
  • MK004356
Sequence Coordinates: 
DCARv2_Chr6:17792543..17792598+
View location in JBrowse: 
DCARv2_Chr6:17792543..17792598+
Sequence: 
TTGGTTTRAGTAAGATTGCTGGACTTAAAGGGGGGATWTTAGGGCTTGGA
GGGGTCGGACACATGGGGGTG
Sequences: 
>MK004356_K1800 ID=MK004356_K1800; Name=MK004356 K1800; organism=Daucus carota; type=genetic_marker
TTGGTTTRAGTAAGATTGCTGGACTTAAAGGGGGGATWTTAGGGCTTGGA
GGGGTCGGACACATGGGGGTG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TTGGTTTRAGTAAGATTGCTGGACTTAAAGGGGGGAT
Three Prime Flanking Region: 
TTAGGGCTTGGAGGGGTCGGACACATGGGGGTG
SNP: 
A/T