MK004432 K1876

Resource Type: 
Genetic Marker
Name: 
MK004432 K1876
Identifier: 
MK004432_K1876
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004432 K1876, is adjacent to primer, K1876_X.
The genetic_marker, MK004432 K1876, is adjacent to primer, K1876_Y.
The genetic_marker, MK004432 K1876, is adjacent to primer, K1876_Common.
The genetic_marker, MK004432 K1876, is adjacent to gene, DCAR_019536.
The genetic_marker, MK004432 K1876, is located in gene, LOC108223038.
The marker_locus, K1876, is an instance of genetic_marker, MK004432 K1876.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH562.974K1876MapViewer
2016 70796 NG full mapChr54.606K1876MapViewer
Synonyms: 
  • MK004432
Sequence Coordinates: 
DCARv2_Chr5:39917008..39917060-
View location in JBrowse: 
DCARv2_Chr5:39917008..39917060-
Sequence: 
AGTTTACTCTGCATACTAACATATGGAGAGCTAAATCYAACTCCATTTAG
CGTTTTACCTGTGACATTGGT
Sequences: 
>MK004432_K1876 ID=MK004432_K1876; Name=MK004432 K1876; organism=Daucus carota; type=genetic_marker
AGTTTACTCTGCATACTAACATATGGAGAGCTAAATCYAACTCCATTTAG
CGTTTTACCTGTGACATTGGT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AGTTTACTCTGCATACTAACATATGGAGAGCTAAATC
Three Prime Flanking Region: 
AACTCCATTTAGCGTTTTACCTGTGACATTGGT
SNP: 
C/T