MK004962 K2406

Resource Type: 
Genetic Marker
Name: 
MK004962 K2406
Identifier: 
MK004962_K2406
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004962 K2406, is adjacent to primer, K2406_X.
The genetic_marker, MK004962 K2406, is adjacent to primer, K2406_Y.
The genetic_marker, MK004962 K2406, is adjacent to primer, K2406_Common.
The genetic_marker, MK004962 K2406, is located in gene, DCAR_022996.
The genetic_marker, MK004962 K2406, is located in gene, LOC108227729.
The marker_locus, K2406, is an instance of genetic_marker, MK004962 K2406.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr63.558K2406MapViewer
2016 Integ NG full mapCH616.194K2406MapViewer
Synonyms: 
  • MK004962
Sequence Coordinates: 
DCARv2_Chr6:2796594..2796644-
View location in JBrowse: 
DCARv2_Chr6:2796594..2796644-
Sequence: 
GCCAGGATAGGTTACCATGGAATCTACCTCGGGATTCWAGATTTAAAAGG
GATGCTACGTCAAACCAGCTT
Sequences: 
>MK004962_K2406 ID=MK004962_K2406; Name=MK004962 K2406; organism=Daucus carota; type=genetic_marker
GCCAGGATAGGTTACCATGGAATCTACCTCGGGATTCWAGATTTAAAAGG
GATGCTACGTCAAACCAGCTT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GCCAGGATAGGTTACCATGGAATCTACCTCGGGATTC
Three Prime Flanking Region: 
AGATTTAAAAGGGATGCTACGTCAAACCAGCTT
SNP: 
A/T