MK006377 K3821

Resource Type: 
Genetic Marker
Name: 
MK006377 K3821
Identifier: 
MK006377_K3821
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006377 K3821, is adjacent to primer, K3821_X.
The genetic_marker, MK006377 K3821, is adjacent to primer, K3821_Y.
The genetic_marker, MK006377 K3821, is adjacent to primer, K3821_Common.
The genetic_marker, MK006377 K3821, is located in gene, DCAR_021853.
The genetic_marker, MK006377 K3821, is located in gene, LOC108224747.
The marker_locus, K3821, is an instance of genetic_marker, MK006377 K3821.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr649.29K3821MapViewer
2016 80592 NG full mapChr610.144K3821MapViewer
2016 Integ NG full mapCH655.18K3821MapViewer
Synonyms: 
  • MK006377
Sequence Coordinates: 
DCARv2_Chr6:19167939..19167987+
View location in JBrowse: 
DCARv2_Chr6:19167939..19167987+
Sequence: 
AAAATTATGTTCCAGTTGGGAGAAGGGGAGTATTTGGWGGTGTTGTTCTT
AATATGCATCTGCACTGGAAA
Sequences: 
>MK006377_K3821 ID=MK006377_K3821; Name=MK006377 K3821; organism=Daucus carota; type=genetic_marker
AAAATTATGTTCCAGTTGGGAGAAGGGGAGTATTTGGWGGTGTTGTTCTT
AATATGCATCTGCACTGGAAA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AAAATTATGTTCCAGTTGGGAGAAGGGGAGTATTTGG
Three Prime Flanking Region: 
GGTGTTGTTCTTAATATGCATCTGCACTGGAAA
SNP: 
A/T