MK006461 K3905

Resource Type: 
Genetic Marker
Name: 
MK006461 K3905
Identifier: 
MK006461_K3905
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006461 K3905, is adjacent to primer, K3905_X.
The genetic_marker, MK006461 K3905, is adjacent to primer, K3905_Y.
The genetic_marker, MK006461 K3905, is adjacent to primer, K3905_Common.
The genetic_marker, MK006461 K3905, is located in gene, DCAR_019339.
The genetic_marker, MK006461 K3905, is located in gene, LOC108220880.
The marker_locus, K3905, is an instance of genetic_marker, MK006461 K3905.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH558.574K3905MapViewer
2016 70796 NG bin mapChr58.818K3905MapViewer
2016 70796 NG full mapChr58.818K3905MapViewer
Synonyms: 
  • MK006461
Sequence Coordinates: 
DCARv2_Chr5:38232051..38232099-
View location in JBrowse: 
DCARv2_Chr5:38232051..38232099-
Sequence: 
ATTGCTCWGACTCTTCCTCATCGTCCTTCTCCTGATCYTGTCCATCTATC
TCATCATTTACGACTCCTRTW
Sequences: 
>MK006461_K3905 ID=MK006461_K3905; Name=MK006461 K3905; organism=Daucus carota; type=genetic_marker
ATTGCTCWGACTCTTCCTCATCGTCCTTCTCCTGATCYTGTCCATCTATC
TCATCATTTACGACTCCTRTW
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
ATTGCTCWGACTCTTCCTCATCGTCCTTCTCCTGATC
Three Prime Flanking Region: 
TGTCCATCTATCTCATCATTTACGACTCCTRTW
SNP: 
C/T