MK006552 K3996

Resource Type: 
Genetic Marker
Name: 
MK006552 K3996
Identifier: 
MK006552_K3996
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006552 K3996, is adjacent to primer, K3996_X.
The genetic_marker, MK006552 K3996, is adjacent to primer, K3996_Y.
The genetic_marker, MK006552 K3996, is adjacent to primer, K3996_Common.
The genetic_marker, MK006552 K3996, is located in gene, DCAR_018616.
The genetic_marker, MK006552 K3996, is located in gene, LOC108223311.
The marker_locus, K3996, is an instance of genetic_marker, MK006552 K3996.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr517.267K3996MapViewer
2016 Integ NG full mapCH550.397K3996MapViewer
Synonyms: 
  • MK006552
Sequence Coordinates: 
DCARv2_Chr5:31567709..31567754-
View location in JBrowse: 
DCARv2_Chr5:31567709..31567754-
Sequence: 
TAGCCGTGTCTTTAAAGAAAACTGGCTCGCACTCAGCKCCGTGGCACCGA
ACATTGCCTATAGACACRRMC
Sequences: 
>MK006552_K3996 ID=MK006552_K3996; Name=MK006552 K3996; organism=Daucus carota; type=genetic_marker
TAGCCGTGTCTTTAAAGAAAACTGGCTCGCACTCAGCKCCGTGGCACCGA
ACATTGCCTATAGACACRRMC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TAGCCGTGTCTTTAAAGAAAACTGGCTCGCACTCAGC
Three Prime Flanking Region: 
CCGTGGCACCGAACATTGCCTATAGACACRRMC
SNP: 
G/T