MK006576 K4020

Resource Type: 
Genetic Marker
Name: 
MK006576 K4020
Identifier: 
MK006576_K4020
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006576 K4020, is adjacent to primer, K4020_X.
The genetic_marker, MK006576 K4020, is adjacent to primer, K4020_Y.
The genetic_marker, MK006576 K4020, is adjacent to primer, K4020_Common.
The genetic_marker, MK006576 K4020, is located in gene, DCAR_003051.
The genetic_marker, MK006576 K4020, is located in gene, LOC108205381.
The marker_locus, K4020, is an instance of genetic_marker, MK006576 K4020.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 80592 NG full mapChr125.873K4020MapViewer
2016 80592 NG bin mapChr125.873K4020MapViewer
2016 Integ NG full mapCH149.772K4020MapViewer
Synonyms: 
  • MK006576
Sequence Coordinates: 
DCARv2_Chr1:35300299..35300350+
View location in JBrowse: 
DCARv2_Chr1:35300299..35300350+
Sequence: 
TACCTGATTGGGAAATATCAGGATTTGTCGAGTACATYAAATCAGGACAA
ACACAAGGTGACATGTTGCTA
Sequences: 
>MK006576_K4020 ID=MK006576_K4020; Name=MK006576 K4020; organism=Daucus carota; type=genetic_marker
TACCTGATTGGGAAATATCAGGATTTGTCGAGTACATYAAATCAGGACAA
ACACAAGGTGACATGTTGCTA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TACCTGATTGGGAAATATCAGGATTTGTCGAGTACAT
Three Prime Flanking Region: 
AAATCAGGACAAACACAAGGTGACATGTTGCTA
SNP: 
C/T