MK006628 K4072

Resource Type: 
Genetic Marker
Name: 
MK006628 K4072
Identifier: 
MK006628_K4072
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 5 relationships.
Relationships
The genetic_marker, MK006628 K4072, is adjacent to primer, K4072_X.
The genetic_marker, MK006628 K4072, is adjacent to primer, K4072_Y.
The genetic_marker, MK006628 K4072, is adjacent to primer, K4072_Common.
The genetic_marker, MK006628 K4072, is located in gene, LOC108223757.
The marker_locus, K4072, is an instance of genetic_marker, MK006628 K4072.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH562.732K4072MapViewer
2016 70796 NG full mapChr54.606K4072MapViewer
Synonyms: 
  • MK006628
Sequence Coordinates: 
DCARv2_Chr5:39607551..39607615-
View location in JBrowse: 
DCARv2_Chr5:39607551..39607615-
Sequence: 
ACCCAAGGAGCTCCCACAAAAAATATAAAAGCTCACCRTAGTGAAGATTA
ACATTCAGCGATACATGAAGC
Sequences: 
>MK006628_K4072 ID=MK006628_K4072; Name=MK006628 K4072; organism=Daucus carota; type=genetic_marker
ACCCAAGGAGCTCCCACAAAAAATATAAAAGCTCACCRTAGTGAAGATTA
ACATTCAGCGATACATGAAGC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
ACCCAAGGAGCTCCCACAAAAAATATAAAAGCTCACC
Three Prime Flanking Region: 
TAGTGAAGATTAACATTCAGCGATACATGAAGC
SNP: 
A/G