Carrot Genome Assembly DCARv2 Gaps

Resource Type: 
Carrot Genome Assembly DCARv2 Gaps

This analysis represents the JBrowse annotation of gaps in the assembled carrot genome sequence.

This JBrowse track shows all gaps in the genome assembly consisting of runs of 1 or more 'N's. Gaps of exactly 1000nt are a special case, and represent gaps of undetermined size.

Data from this analysis can be viewed in JBrowse here.

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
There is 1 relationship.
The analysis, Carrot Genome Assembly DCARv2 Gaps, is a part of analysis, Carrot Genome Assembly DCARv2.
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Program, Pipeline, Workflow or Method Name: 
detection using regular expression
Program Version: 
not specified
Date Performed: 
Friday, November 13, 2015 - 00:00
Data Source: 
Source Name
: CarrotOmics 177698
NameCommon NameComment
For a general overview of carrot, see the Carrot Facts Page
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