Resource Type:
Analysis
Name:
Nantaise transcriptome assembly Arias et al. 2020 blast to DCARv2
Description:
The assembled sequences from the 2020 transcriptome assembly were mapped to the carrot genome assembly DCARv2 using blastn. Resulting hits were converted to gff3 format for use in the CarrotOmics JBrowse. This file can be downloaded from the link below.
Data from this analysis can be viewed in JBrowse here.
Relationship:
| Relationships |
|---|
| The analysis, Nantaise transcriptome assembly Arias et al. 2020 blast to DCARv2, is a part of analysis, Nantaise transcriptome assembly Arias et al. 2020. |
Program, Pipeline, Workflow or Method Name:
blastn
Program Version:
2.10.0+
Date Performed:
Friday, March 26, 2021 - 11:01
Data Source:
- Source Name
- : CarrotOmics 188242
Organism:
| Name | Common Name | Comment |
|---|---|---|
Carrot | For a general overview of carrot, see the Carrot Facts Page |