| GRIN Accession |  |
|---|
- PS 0507
- Ames 29088
- 3
Synonyms:3:Ames 29088:PS 0507; COLLECTED 05/2007 Tunisia by Simon, P., USDA, ARS, Vegetable Crops Research Unit. DONATED 07/27/2007 Wisconsin, United States by Simon, P., USDA, ARS, Vegetable Crops Research Unit
| Latitude | Uncertainty (±) | Longitude | Uncertainty (±) | Altitude (m) | Uncertainty (±) | Description |
|---|---|---|---|---|---|---|
| 33.5325 | 10.672778 | unavailable | Tunisia |
| Name | Description |
|---|---|
- Martínez-Flores et al. Extended studies of interspecific relationships in Daucus (Apiaceae) using DNA sequences from ten nuclear orthologues. Botanical Journal of the Linnean Society. 2019. 191(2):164-87
- Spooner DM, Ruess H, Iorizzo M, Senalik D, Simon P. Entire plastid phylogeny of the carrot genus (Daucus, Apiaceae): Concordance with nuclear data and mitochondrial and nuclear DNA insertions to the plastid.. American journal of botany. 2017 Feb; 104(2):296-312.
- Arbizu C, Ruess H, Senalik D, Simon PW, Spooner DM. Phylogenomics of the carrot genus (Daucus, Apiaceae).. American journal of botany. 2014 Oct; 101(10):1666-85.
- Spooner D, Rojas P, Bonierbale M, Mueller LA, Srivastav M, Senalik D, Simon P. Molecular phylogeny of Daucus (Apiaceae). Systematic botany. 2013; 38(3):850-857.
| Relationships |
|---|
| The sample, PI_662301_08ncai01_SD:DAUCUS.AMES.OBS.2011, is sample of accession, Pseudorlaya pumila Tunisia. |
| The sample, PI_662301_07ncao01_SD:NC7.INVENTORY.BRENNER, is sample of accession, Pseudorlaya pumila Tunisia. |
| The sample, PI_662301_08ncai01_SD:NC7.INVENTORY.BRENNER, is sample of accession, Pseudorlaya pumila Tunisia. |
| Name | Description |
|---|---|
TreeBASE study 13876: Molecular phylogeny of Daucus (Apiaceae). There is one tree from this study available in CarrotOmics. Tree Tr60728 corresponds to figure 1 in the publication, however, branch lengths and parsimony bootstrap values were not included in the TreeBASE submission. The tree in figure 2 from the publication was not submitted to TreeBASE and therefore is not present in CarrotOmics. | |
TreeBASE study 15477: A phylogenomic study of Daucus. There are six analyses from this study providing six trees available in CarrotOmics. None of these trees is present in the referenced publication. None of the trees in the referenced publication are in TreeBASE. Note that publication title is different than the TreeBASE study title. | |
TreeBASE Study S19872. This study contains 25 trees. One tree (Tr98472) corresponds to figure 2 in the reference publication, the remaining trees are supplementary information. | |
TreeBASE Study S23618. Extended studies of interspecific relationships in Daucus (Apiaceae) using DNA sequences from ten nuclear orthologues. This study contains one tree. | |
| Name | Description |
|---|---|
TreeBASE Tree Tr115096 from study S23618. This tree corresponds to figure 1 in the referenced publication. Strict consensus maximum parsimony tree of 48 trees (tree length 8341) constructed with ten nuclear orthologous gene sequences of allele set B, without Daucus montanus, but with this species drawn in manually based on individual allele results supporting it as an allopolyploid species between D. pusillus and D. glochidiatus. Original tree name "MajRule" | |
TreeBASE Tree Tr60728 from study S13876: Molecular Phylogeny of Daucus. This tree corresponds to figure 1 in the publication, however, branch lengths and parsimony bootstrap values were not included in the TreeBASE submission. | |
TreeBASE Tree Tr71398 from study S15477. Original tree name "Tree1". This tree is not present in the publication | |
TreeBASE Tree Tr71399 from study S15477. Original tree name "Tree2". This tree is not present in the publication | |
TreeBASE Tree Tr71400 from study S15477. Original tree name "Tree3". This tree is not present in the publication | |
TreeBASE Tree Tr71401 from study S15477. Original tree name "Tree4". This tree is not present in the publication | |
TreeBASE Tree Tr71402 from study S15477. Original tree name "Tree5". This tree is not present in the publication | |
TreeBASE Tree Tr71403 from study S15477. Original tree name "Tree6". This tree is not present in the publication | |
TreeBASE Tree Tr98472 from study S19872. This tree corresponds to figure 2 in the referenced publication | |
TreeBASE Tree Tr98473 from study S19872. Original tree name "PAUP_2". This is a supplemental tree not present in the referenced publication. |
| Name | Uniquename | Feature Type |
|---|---|---|
S13876_Pseudorlaya_pumila | S13876_Pseudorlaya_pumila | DNA |
S15477_Pseudorlaya_pumila_A29088 | S15477_Pseudorlaya_pumila_A29088 | DNA |
S19872_Pseudorlaya_pumila_662301 | S19872_Pseudorlaya_pumila_662301 | DNA |
S23618_Rouya_polygama_662301 | S23618_Rouya_polygama_662301 | DNA |
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