Resource Type:
Germplasm Accession
Accession:
PI 649446
Cross Reference:
| GRIN Accession |  |
|---|
Organism:
Name:
Caucalis platycarpos Germany
Identifier:
PI 649446
Alias:
- Index Seminum 37
- Ames 23892
Description:
Synonyms:Ames 23892:Index Seminum 37; COLLECTED PRE 1997 Saxony-Anhalt, Germany by Arndt, D., Botanischer Garten. DONATED 09/03/1997 Saxony, Germany by Botanischer Garten
Geographic Location:
| Latitude | Uncertainty (±) | Longitude | Uncertainty (±) | Altitude (m) | Uncertainty (±) | Description |
|---|---|---|---|---|---|---|
| 51.05 | 0.00833333 | 12.066667 | 0.00833333 | unavailable | Germany: Mannsdorf. |
Biomaterial:
| Name | Description |
|---|---|
Publication:
- Spooner DM, Ruess H, Iorizzo M, Senalik D, Simon P. Entire plastid phylogeny of the carrot genus (Daucus, Apiaceae): Concordance with nuclear data and mitochondrial and nuclear DNA insertions to the plastid.. American journal of botany. 2017 Feb; 104(2):296-312.
- Arbizu C, Ruess H, Senalik D, Simon PW, Spooner DM. Phylogenomics of the carrot genus (Daucus, Apiaceae).. American journal of botany. 2014 Oct; 101(10):1666-85.
- Spooner D, Rojas P, Bonierbale M, Mueller LA, Srivastav M, Senalik D, Simon P. Molecular phylogeny of Daucus (Apiaceae). Systematic botany. 2013; 38(3):850-857.
Relationship:
| Relationships |
|---|
| The sample, PI_649446_02ncai01_SD:DAUCUS.AMES.OBS.2013, is sample of accession, Caucalis platycarpos Germany. |
| The sample, PI_649446_02ncai01_SD:DAUCUS.AMES.OBS.2011, is sample of accession, Caucalis platycarpos Germany. |
| The sample, PI_649446_02ncai01_SD:NC7.INVENTORY.BRENNER, is sample of accession, Caucalis platycarpos Germany. |
| The sample, PI_649446_97ncao01_SD:NC7.INVENTORY.BRENNER, is sample of accession, Caucalis platycarpos Germany. |
Project:
| Name | Description |
|---|---|
TreeBASE study 13876: Molecular phylogeny of Daucus (Apiaceae). There is one tree from this study available in CarrotOmics. Tree Tr60728 corresponds to figure 1 in the publication, however, branch lengths and parsimony bootstrap values were not included in the TreeBASE submission. The tree in figure 2 from the publication was not submitted to TreeBASE and therefore is not present in CarrotOmics. | |
TreeBASE study 15477: A phylogenomic study of Daucus. There are six analyses from this study providing six trees available in CarrotOmics. None of these trees is present in the referenced publication. None of the trees in the referenced publication are in TreeBASE. Note that publication title is different than the TreeBASE study title. | |
TreeBASE Study S19872. This study contains 25 trees. One tree (Tr98472) corresponds to figure 2 in the reference publication, the remaining trees are supplementary information. | |
Analysis:
| Name | Description |
|---|---|
TreeBASE Tree Tr60728 from study S13876: Molecular Phylogeny of Daucus. This tree corresponds to figure 1 in the publication, however, branch lengths and parsimony bootstrap values were not included in the TreeBASE submission. | |
TreeBASE Tree Tr71398 from study S15477. Original tree name "Tree1". This tree is not present in the publication | |
TreeBASE Tree Tr71399 from study S15477. Original tree name "Tree2". This tree is not present in the publication | |
TreeBASE Tree Tr71400 from study S15477. Original tree name "Tree3". This tree is not present in the publication | |
TreeBASE Tree Tr71401 from study S15477. Original tree name "Tree4". This tree is not present in the publication | |
TreeBASE Tree Tr71402 from study S15477. Original tree name "Tree5". This tree is not present in the publication | |
TreeBASE Tree Tr71403 from study S15477. Original tree name "Tree6". This tree is not present in the publication | |
TreeBASE Tree Tr98472 from study S19872. This tree corresponds to figure 2 in the referenced publication | |
TreeBASE Tree Tr98473 from study S19872. Original tree name "PAUP_2". This is a supplemental tree not present in the referenced publication. | |
TreeBASE Tree Tr98474 from study S19872. Original tree name "PAUP_3". This is a supplemental tree not present in the referenced publication. |
Feature:
| Name | Uniquename | Feature Type |
|---|---|---|
S13876_Caucalis_platycarpos | S13876_Caucalis_platycarpos | DNA |
S15477_Caucalis_platycarpos_649446 | S15477_Caucalis_platycarpos_649446 | DNA |
S19872_Caucalis_platycarpos_649446 | S19872_Caucalis_platycarpos_649446 | DNA |
Stock Center:
GRIN Accession
Data Year:
1997
Image File:
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