Resource Type:
Genetic Marker
Name:
MK003855 K1299
Identifier:
MK003855_K1299
Organism:
Marker Type:
SNP
Publication:
- Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
- Cavagnaro PF, Iorizzo M, Yildiz M, Senalik D, Parsons J, Ellison S, Simon PW. A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.. BMC genomics. 2014 Dec 16; 15:1118.
Relationship:
| Relationships |
|---|
| The genetic_marker, MK003855 K1299, is adjacent to primer, K1299_X. |
| The genetic_marker, MK003855 K1299, is adjacent to primer, K1299_Y. |
| The genetic_marker, MK003855 K1299, is adjacent to primer, K1299_Common. |
| The genetic_marker, MK003855 K1299, is located in gene, DCAR_016602. |
| The genetic_marker, MK003855 K1299, is located in gene, LOC108221940. |
| The marker_locus, K1299, is an instance of genetic_marker, MK003855 K1299. |
Synonyms:
- MK003855
Sequence Coordinates:
DCARv2_Chr5:5226741..5226788+
View location in JBrowse:
Sequence:
GGSCAATGGAAGAATGCGGAGAAGTCGGTGAGCTTGCRTGCCCTCTTTGC
CGAGGCCAAGTCAAAGGTTGG
Sequences:
>MK003855_K1299 ID=MK003855_K1299; Name=MK003855 K1299; organism=Daucus carota; type=genetic_marker
GGSCAATGGAAGAATGCGGAGAAGTCGGTGAGCTTGCRTGCCCTCTTTGC
CGAGGCCAAGTCAAAGGTTGG
This is the primary representative sequence for this feature.
Sequence Length:
71
Five Prime Flanking Region:
GGSCAATGGAAGAATGCGGAGAAGTCGGTGAGCTTGC
Three Prime Flanking Region:
TGCCCTCTTTGCCGAGGCCAAGTCAAAGGTTGG
SNP:
A/G