MK003939 K1383

Resource Type: 
Genetic Marker
Name: 
MK003939 K1383
Identifier: 
MK003939_K1383
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK003939 K1383, is adjacent to primer, K1383_X.
The genetic_marker, MK003939 K1383, is adjacent to primer, K1383_Y.
The genetic_marker, MK003939 K1383, is adjacent to primer, K1383_Common.
The genetic_marker, MK003939 K1383, is located in gene, DCAR_019544.
The genetic_marker, MK003939 K1383, is located in gene, LOC108220341.
The marker_locus, K1383, is an instance of genetic_marker, MK003939 K1383.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH562.332K1383MapViewer
2016 70796 NG full mapChr54.606K1383MapViewer
Synonyms: 
  • MK003939
Sequence Coordinates: 
DCARv2_Chr5:39952566..39952613-
View location in JBrowse: 
DCARv2_Chr5:39952566..39952613-
Sequence: 
GGTATGGACCGCGGTCACGAAGCGTCCTGTAAGCTTCWATCACAAACATG
GCCTCATTGGCTCCCTTGGCC
Sequences: 
>MK003939_K1383 ID=MK003939_K1383; Name=MK003939 K1383; organism=Daucus carota; type=genetic_marker
GGTATGGACCGCGGTCACGAAGCGTCCTGTAAGCTTCWATCACAAACATG
GCCTCATTGGCTCCCTTGGCC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GGTATGGACCGCGGTCACGAAGCGTCCTGTAAGCTTC
Three Prime Flanking Region: 
ATCACAAACATGGCCTCATTGGCTCCCTTGGCC
SNP: 
A/T