MK004589 K2033

Resource Type: 
Genetic Marker
Name: 
MK004589 K2033
Identifier: 
MK004589_K2033
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004589 K2033, is adjacent to primer, K2033_X.
The genetic_marker, MK004589 K2033, is adjacent to primer, K2033_Y.
The genetic_marker, MK004589 K2033, is adjacent to primer, K2033_Common.
The genetic_marker, MK004589 K2033, is located in gene, DCAR_002623.
The genetic_marker, MK004589 K2033, is located in gene, LOC108211723.
The marker_locus, K2033, is an instance of genetic_marker, MK004589 K2033.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 80592 NG full mapChr127.147K2033MapViewer
2016 Integ NG bin mapCH143.157K2033MapViewer
2016 70796 NG full mapChr124.976K2033MapViewer
2016 Integ NG full mapCH146.58K2033MapViewer
Synonyms: 
  • MK004589
Sequence Coordinates: 
DCARv2_Chr1:31236410..31236461+
View location in JBrowse: 
DCARv2_Chr1:31236410..31236461+
Sequence: 
TTTTGAGCCGATGGGCAGCTATCATCTCATCTGTTATRACGTCCAACTTT
TCTTTTTTGGGGGGCTGCGTC
Sequences: 
>MK004589_K2033 ID=MK004589_K2033; Name=MK004589 K2033; organism=Daucus carota; type=genetic_marker
TTTTGAGCCGATGGGCAGCTATCATCTCATCTGTTATRACGTCCAACTTT
TCTTTTTTGGGGGGCTGCGTC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TTTTGAGCCGATGGGCAGCTATCATCTCATCTGTTAT
Three Prime Flanking Region: 
ACGTCCAACTTTTCTTTTTTGGGGGGCTGCGTC
SNP: 
A/G