MK004828 K2272

Resource Type: 
Genetic Marker
Name: 
MK004828 K2272
Identifier: 
MK004828_K2272
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004828 K2272, is adjacent to primer, K2272_X.
The genetic_marker, MK004828 K2272, is adjacent to primer, K2272_Y.
The genetic_marker, MK004828 K2272, is adjacent to primer, K2272_Common.
The genetic_marker, MK004828 K2272, is located in gene, DCAR_016565.
The genetic_marker, MK004828 K2272, is located in gene, LOC108219659.
The marker_locus, K2272, is an instance of genetic_marker, MK004828 K2272.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH513.73K2272MapViewer
2016 70796 NG full mapChr561.618K2272MapViewer
Synonyms: 
  • MK004828
Sequence Coordinates: 
DCARv2_Chr5:4757229..4757271+
View location in JBrowse: 
DCARv2_Chr5:4757229..4757271+
Sequence: 
ACAGCAGTGCAGCGCTTCGAGCATCATTTGTAAGCAARTCCCAAAGTCCA
AGCCAGAGGGCTTCTGTTAAC
Sequences: 
>MK004828_K2272 ID=MK004828_K2272; Name=MK004828 K2272; organism=Daucus carota; type=genetic_marker
ACAGCAGTGCAGCGCTTCGAGCATCATTTGTAAGCAARTCCCAAAGTCCA
AGCCAGAGGGCTTCTGTTAAC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
ACAGCAGTGCAGCGCTTCGAGCATCATTTGTAAGCAA
Three Prime Flanking Region: 
TCCCAAAGTCCAAGCCAGAGGGCTTCTGTTAAC
SNP: 
A/G