MK005566 K3010

Resource Type: 
Genetic Marker
Name: 
MK005566 K3010
Identifier: 
MK005566_K3010
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005566 K3010, is adjacent to primer, K3010_X.
The genetic_marker, MK005566 K3010, is adjacent to primer, K3010_Y.
The genetic_marker, MK005566 K3010, is adjacent to primer, K3010_Common.
The genetic_marker, MK005566 K3010, is located in gene, DCAR_018803.
The genetic_marker, MK005566 K3010, is located in gene, LOC108223505.
The marker_locus, K3010, is an instance of genetic_marker, MK005566 K3010.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr514.899K3010MapViewer
2016 Integ NG full mapCH552.742K3010MapViewer
Synonyms: 
  • MK005566
Sequence Coordinates: 
DCARv2_Chr5:33366245..33366298-
View location in JBrowse: 
DCARv2_Chr5:33366245..33366298-
Sequence: 
TATCMTGTGATGGTCTTTTACGTTTCTCTGGACTCTCRCCATGTGAAACC
TGTGAAACTGAATCCCTGGAA
Sequences: 
>MK005566_K3010 ID=MK005566_K3010; Name=MK005566 K3010; organism=Daucus carota; type=genetic_marker
TATCMTGTGATGGTCTTTTACGTTTCTCTGGACTCTCRCCATGTGAAACC
TGTGAAACTGAATCCCTGGAA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TATCMTGTGATGGTCTTTTACGTTTCTCTGGACTCTC
Three Prime Flanking Region: 
CCATGTGAAACCTGTGAAACTGAATCCCTGGAA
SNP: 
A/G