MK006399 K3843

Resource Type: 
Genetic Marker
Name: 
MK006399 K3843
Identifier: 
MK006399_K3843
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006399 K3843, is adjacent to primer, K3843_X.
The genetic_marker, MK006399 K3843, is adjacent to primer, K3843_Y.
The genetic_marker, MK006399 K3843, is adjacent to primer, K3843_Common.
The genetic_marker, MK006399 K3843, is located in gene, DCAR_018658.
The genetic_marker, MK006399 K3843, is located in gene, LOC108223000.
The marker_locus, K3843, is an instance of genetic_marker, MK006399 K3843.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr517.267K3843MapViewer
2016 Integ NG full mapCH550.465K3843MapViewer
Synonyms: 
  • MK006399
Sequence Coordinates: 
DCARv2_Chr5:31936511..31936563-
View location in JBrowse: 
DCARv2_Chr5:31936511..31936563-
Sequence: 
AGTTTTCTTCTGGCTATCCAACTGGTCAAACTCAACARCCTCAATTTCAG
TCTTCCCAGTTTTCTCCTGGC
Sequences: 
>MK006399_K3843 ID=MK006399_K3843; Name=MK006399 K3843; organism=Daucus carota; type=genetic_marker
AGTTTTCTTCTGGCTATCCAACTGGTCAAACTCAACARCCTCAATTTCAG
TCTTCCCAGTTTTCTCCTGGC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AGTTTTCTTCTGGCTATCCAACTGGTCAAACTCAACA
Three Prime Flanking Region: 
CCTCAATTTCAGTCTTCCCAGTTTTCTCCTGGC
SNP: 
A/G