Carrot ESTs for DH1 v3.0 genome assembly evaluation

Resource Type:

File

File Type:

FASTA format

Download:


Download File Name	Available at	Size	MD5
carrot_est.fna.gz	CarrotOmics	2.6MB	ed92396eae2c741fd00b135640184639

Description:

Sequences used to assess coverage of the carrot DH1 v3.0 genome assembly. This file contains 18,137 sequences. Carrot EST sequences were obtained from NCBI with the query:
esearch -db nuccore -query '(EST AND "Daucus carota"[porgn:__txid4039])' | efetch -format fasta

References:

The following records refer to this file:


Organism	Daucus carota subsp. sativus
Project	Improved Hybrid de novo Genome Assembly, Gene Prediction and Annotation of Carrot

Project:


Name	Description
Improved Hybrid de novo Genome Assembly, Gene Prediction and Annotation of Carrot	The project goals are to improve the assembly of the genome of cultivated carrot, and improve gene predictions using this improved assembly.

Organism:


Name	Common Name	Comment
Daucus carota subsp. sativus	Carrot	For a general overview of carrot, see the Carrot Facts Page

License:


Name	Public Domain
License Summary	The data have no known copyrights or restrictions and can be be freely used by anyone.
Full Legal Text	Not Available